Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I1 R1
|
61 |
131.2 |
4447032 |
99.1% |
4407008 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,913,347 |
G→T |
S102* (TCG→TAG) |
relA ← |
GDP/GTP pyrophosphokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,913,347 | 0 | G | T | 100.0%
| 447.2
/ NA
| 123 | S102* (TCG→TAG) | relA | GDP/GTP pyrophosphokinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (58/65); total (58/65) |
Only 100 of 125 total aligned reads displayed.
GAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCC > NC_000913/2913213‑2913482
|
aaaTCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTAcc > 1:1674511/1‑140 (MQ=255)
aaaTCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTAcc > 1:349480/1‑140 (MQ=255)
atcatcGACCATCGCCAATAACCTCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGa < 1:1858789/140‑1 (MQ=255)
cGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGctc > 2:1257672/1‑140 (MQ=255)
ccATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCa < 2:2104393/140‑1 (MQ=255)
acATCGCCAATAACATCCGGCGAACGTTACCGACCTGTTCGGAGAAAACAGAAACAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCa < 2:349480/139‑1 (MQ=255)
aTCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACg < 1:525585/140‑1 (MQ=255)
aTCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACg < 1:917432/140‑1 (MQ=255)
tCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACgc > 1:1717429/1‑140 (MQ=255)
tCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACgc > 1:2187280/1‑140 (MQ=255)
tCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACgc > 1:196892/1‑140 (MQ=255)
aTAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGcaca < 2:239443/140‑1 (MQ=255)
aTAACATCCGGCGAACGTTATCGACCTGTTCGGAGAAAACAGAATCAGTGTGCGTCGTTTTCAGCGGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGcaca < 2:281941/140‑1 (MQ=255)
tAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACAt > 2:1236497/1‑140 (MQ=255)
aTCCGGCGAACGTTATCGCCCTGTTCGGAGGAAACAGAATCAGTGGGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTc < 1:931635/140‑1 (MQ=255)
tCCGGCGAACGTTATCGACCTGTTCGGAGAAAAAAAAATCAGTGTGCGTCGCTTTCAGCTGGCGAATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCg < 2:1439605/140‑1 (MQ=255)
acgggCGAACGTTATCGCCCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCg < 2:770408/137‑1 (MQ=255)
cGGCGAACGTTATCGACCTTTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCt < 1:460447/140‑1 (MQ=255)
cGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGAc < 2:1717429/140‑1 (MQ=255)
aaatctttAGCGACTTGTTAGGAGGAAACAAAATCAGTTTGCTTCACTTTCGGATGGCGACTCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGAc < 2:1078107/134‑1 (MQ=255)
gTTACCGACCGGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGt < 2:830664/140‑1 (MQ=255)
cTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCg > 1:1026950/1‑140 (MQ=255)
ttCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCa > 1:861308/1‑140 (MQ=255)
ttCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCa > 2:1075023/1‑140 (MQ=255)
ttCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCa < 2:861308/140‑1 (MQ=255)
ttCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCa > 1:132063/1‑140 (MQ=255)
cGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCaga > 2:1200828/1‑140 (MQ=255)
ggaAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGa > 1:1482710/1‑140 (MQ=255)
gaAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGaa > 1:552589/1‑140 (MQ=255)
aaCAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGaaaa > 2:40539/1‑140 (MQ=255)
aaCAAAATCAGTGTGCGTCGTTTTCAGCTGCCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGaaaa < 2:499250/140‑1 (MQ=255)
aCAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAag > 2:1988718/1‑140 (MQ=255)
aCAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAag > 2:279536/1‑140 (MQ=255)
aCAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAag > 1:1182562/1‑140 (MQ=255)
aCAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAag > 2:705587/1‑140 (MQ=255)
aTCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAgcg < 1:1236497/140‑1 (MQ=255)
gtgtGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGcgccgc > 2:1950414/1‑140 (MQ=255)
tgtgCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCgccgcc < 1:1921097/140‑1 (MQ=255)
tgtgCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCgccgcc > 1:1710568/1‑140 (MQ=255)
tgCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGccgcccg < 2:2064278/140‑1 (MQ=255)
tgCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGccgcccg < 2:448721/140‑1 (MQ=255)
tgCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGccgcccg > 1:2110349/1‑140 (MQ=255)
ggCGTCTCTTCAAGCGGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGccgcccg < 2:687343/139‑1 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGTGCCGCCCGCa < 2:132063/140‑1 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCa > 2:343339/1‑140 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCa < 1:1988718/140‑1 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCa < 1:40539/140‑1 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCa > 1:2037067/1‑140 (MQ=255)
cGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCa > 2:427384/1‑140 (MQ=255)
cTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCgtg > 1:1546426/1‑140 (MQ=255)
tttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCgtgt > 1:425785/1‑140 (MQ=255)
tttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCgtgt > 2:1300577/1‑140 (MQ=255)
ttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTc < 1:1608361/140‑1 (MQ=255)
ttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTc < 1:1587037/140‑1 (MQ=255)
ttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTc < 2:2187280/140‑1 (MQ=255)
ttCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTc < 1:2215096/140‑1 (MQ=255)
tCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCa < 1:427384/140‑1 (MQ=255)
tCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCa < 2:1876468/140‑1 (MQ=255)
tCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCa < 2:2110349/140‑1 (MQ=255)
acAGCTGGAGGTTCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCa < 2:1726552/139‑1 (MQ=255)
aGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAAt > 1:274880/1‑140 (MQ=255)
tGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTc < 1:1200828/140‑1 (MQ=255)
ggCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTcc < 2:2203078/140‑1 (MQ=255)
ggCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTcc < 2:1674511/140‑1 (MQ=255)
ggCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTcc < 2:196892/140‑1 (MQ=255)
aaTCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATAc < 2:1809883/139‑1 (MQ=255)
tCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTcc < 2:1254742/134‑1 (MQ=255)
gcccgccATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTa < 2:83515/138‑1 (MQ=255)
cgccgcCATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTa < 2:219942/140‑1 (MQ=255)
cccgccATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTaa < 2:1546426/139‑1 (MQ=255)
cATATCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCg < 2:1389533/140‑1 (MQ=255)
tatCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCgag < 1:2038248/140‑1 (MQ=255)
tatCACGCACGCCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCgag > 2:2038248/1‑140 (MQ=255)
cgcCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTcc < 1:279536/140‑1 (MQ=255)
agcCGTAAATAATGTTAACGACCTACTTACCGACGCTGTCACGCAGCACATCTTCGCTGACTACGTTGGCATCAGCGAGAGAGAAAAGCACCGACGCCCGCAGCGTGTCAACGTCCATTCTTAATGTCGTTAGGATCTcc < 2:1807513/139‑1 (MQ=255)
gcCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTcca > 1:1873802/1‑140 (MQ=255)
gcCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTcca < 1:599218/140‑1 (MQ=255)
gcCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTcca > 1:779066/1‑140 (MQ=255)
gcCGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTcca > 1:939074/1‑140 (MQ=255)
ccGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccac < 1:1300577/140‑1 (MQ=255)
ccGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccac < 1:2083771/140‑1 (MQ=255)
ccGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccac < 1:1701193/140‑1 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCTAGAGGATCTccacc > 1:141783/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 1:122616/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 2:841992/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 2:1631346/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 2:739442/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 1:341661/1‑140 (MQ=255)
cGTGAATAAGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTccacc > 1:1373120/1‑140 (MQ=255)
aaGGTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCaa < 1:343339/140‑1 (MQ=255)
gTTAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAacac > 1:2068494/1‑140 (MQ=255)
tAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAAcaccc > 2:2027116/1‑139 (MQ=255)
tAACGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAAcacca < 1:1075023/140‑1 (MQ=255)
aaCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAAcaccac < 1:2129932/140‑1 (MQ=255)
aaCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAAcaccac > 1:1839795/1‑140 (MQ=255)
aaCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAAcaccac < 1:705587/140‑1 (MQ=255)
aCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCAt < 1:1106369/128‑1 (MQ=255)
aCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCAt > 2:1106369/1‑128 (MQ=255)
aCGACCTACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACg > 2:1078492/1‑140 (MQ=255)
gacctacTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGcc < 1:1088974/140‑1 (MQ=255)
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GAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCC > NC_000913/2913213‑2913482
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
