Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A16 F48 I1 R1
|
61 |
131.2 |
4447032 |
99.1% |
4407008 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,446,113 |
C→A |
V10F (GTT→TTT) |
rplF ← |
50S ribosomal subunit protein L6 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,446,113 | 0 | C | A | 100.0%
| 429.1
/ NA
| 121 | V10F (GTT→TTT) | rplF | 50S ribosomal subunit protein L6 |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (53/68); total (53/68) |
Only 100 of 123 total aligned reads displayed.
ACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCG > NC_000913/3445976‑3446243
|
aCGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGa > 2:1924837/1‑140 (MQ=255)
aCGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGa > 1:1871105/1‑140 (MQ=255)
cgGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCg < 1:2125092/140‑1 (MQ=255)
gACCGAAGGTCAGGGTATTATCTGCATGTTTAGCTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGt < 2:568618/140‑1 (MQ=255)
gACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGt > 2:1347803/1‑140 (MQ=255)
acgcggaGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGt < 1:691040/134‑1 (MQ=255)
aCCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTg > 1:224401/1‑140 (MQ=255)
aCCGAAGGTCAGGGAATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTg > 2:924427/1‑140 (MQ=255)
aaGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCttt > 1:666374/1‑140 (MQ=255)
aaGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCaa < 2:224401/139‑1 (MQ=255)
gggTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAaca < 2:2153406/140‑1 (MQ=255)
tatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGAc > 1:147360/1‑140 (MQ=255)
tatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGAc > 1:2104181/1‑140 (MQ=255)
tatCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGAc > 1:2184869/1‑140 (MQ=255)
atCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACa > 1:1178557/1‑140 (MQ=255)
tGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAttt > 1:955296/1‑140 (MQ=255)
gCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCATCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAtttt > 1:1558700/1‑140 (MQ=255)
gCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAtttt > 1:1426653/1‑140 (MQ=255)
gCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGACCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACgag > 1:884194/1‑133 (MQ=255)
cATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAttttt > 2:1893160/1‑140 (MQ=255)
gtGTTTATCTTCAACATGAGCATTGAGATAACTAAAGATCTCTCTGTATTTATCTTTGATGGTAATGAGCTAACCGGTAATTTTTACGTCTACGACGGCAGAAACAAATACTGGTTCTTTAGCAACACGAGACAtttttt > 2:2087068/2‑140 (MQ=255)
aTGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAtttttt > 2:2168911/1‑140 (MQ=255)
aTGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAtttttt > 1:828075/1‑140 (MQ=255)
aTGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACAtttttt > 1:115523/1‑140 (MQ=255)
gTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcc < 2:1981841/140‑1 (MQ=255)
gTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcc < 1:628503/140‑1 (MQ=255)
gTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcc > 1:1470472/1‑140 (MQ=255)
gTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcc > 1:1464784/1‑140 (MQ=255)
gTTTAACTTCAACAGCATCGTTAAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcc < 1:1856544/140‑1 (MQ=255)
tttAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTtcct < 1:1978931/140‑1 (MQ=255)
aCTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGa < 2:1426653/140‑1 (MQ=255)
attCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGAt < 2:666374/139‑1 (MQ=255)
ttCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGAtt < 1:1229216/140‑1 (MQ=255)
aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAgg < 2:2184869/140‑1 (MQ=255)
aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAgg > 1:1050864/1‑140 (MQ=255)
aaCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAgg < 1:1024036/140‑1 (MQ=255)
aCAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGc > 2:1774765/1‑140 (MQ=255)
cAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCt < 2:1204057/140‑1 (MQ=255)
cAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCt < 1:1028325/140‑1 (MQ=255)
cATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACg < 1:2204534/140‑1 (MQ=255)
cATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACg < 1:1774765/140‑1 (MQ=255)
tCGTTGAGAGTACGAGTCAGCTCGCCGTTATTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTa > 1:1964463/1‑140 (MQ=255)
cGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAg < 1:166606/140‑1 (MQ=255)
ttGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGAACGGTGATTTTTACGTTAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAAAACGAGACATTTTTTCCTCCGATTAGGCTACGTACCa > 1:1098493/1‑140 (MQ=255)
agTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATaa > 2:1256658/1‑140 (MQ=255)
agTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATaa > 1:962720/1‑140 (MQ=255)
tACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAAtt > 1:803267/1‑140 (MQ=255)
gAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCg > 1:392104/1‑140 (MQ=255)
gAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCCCCGATTAGGCTACGTAGCAGATAATTTCg > 1:992835/1‑140 (MQ=255)
gTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGcc > 2:941384/1‑140 (MQ=255)
cAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccac < 1:810035/140‑1 (MQ=255)
cAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccac < 2:392104/140‑1 (MQ=255)
aGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccacc < 1:180129/140‑1 (MQ=255)
aGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGccacc < 2:147360/140‑1 (MQ=255)
cGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGa < 2:955296/140‑1 (MQ=255)
cGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGa < 2:1464784/140‑1 (MQ=255)
gCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCg < 1:1820476/130‑1 (MQ=255)
gCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTTATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCg > 2:1820476/1‑130 (MQ=255)
gCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGAc > 2:971538/1‑140 (MQ=255)
cGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCa > 1:2029738/1‑140 (MQ=255)
cGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCa < 2:1558700/140‑1 (MQ=255)
ttttACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGcc < 1:924427/140‑1 (MQ=255)
ccTTTGCTCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGACACATGTTTTCATCCGATTAGGTTCCGTAGCAGATAATTTCGCCTCCAAGACCAGCCTGgcg < 1:2087068/140‑1 (MQ=255)
ccTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcg < 2:114216/140‑1 (MQ=255)
ccTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcg < 2:2104181/140‑1 (MQ=255)
cTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGgcgc < 2:1178557/140‑1 (MQ=255)
tGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCt > 2:31835/1‑140 (MQ=255)
taataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGa < 2:428340/140‑1 (MQ=255)
taataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGa < 1:1256658/140‑1 (MQ=255)
ataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 2:1085930/140‑1 (MQ=255)
ataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 2:828075/140‑1 (MQ=255)
ataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 1:1924837/140‑1 (MQ=255)
ataaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 1:2168911/140‑1 (MQ=255)
taaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCa < 1:971538/140‑1 (MQ=255)
aaCCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAg < 2:1871105/140‑1 (MQ=255)
ccTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTc > 1:701943/1‑140 (MQ=255)
tGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCAt < 2:1964463/140‑1 (MQ=255)
gACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc > 1:356372/1‑133 (MQ=255)
gACCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATc < 2:356372/133‑1 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCAt < 1:1087596/138‑1 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCAt > 2:1087596/1‑138 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa < 1:474512/140‑1 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 1:59343/1‑140 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 1:370027/1‑140 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa < 1:2114011/140‑1 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 2:376003/1‑140 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 1:1669881/1‑140 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa < 1:330389/140‑1 (MQ=255)
aCCGTTGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATaa > 2:2114011/1‑140 (MQ=255)
ttGATTTTTACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACAcc > 1:514928/1‑140 (MQ=255)
ttttACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTag < 2:370027/140‑1 (MQ=255)
ttttACGTCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTag < 2:514928/140‑1 (MQ=255)
tCAACGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGa < 2:1470472/140‑1 (MQ=255)
aCGCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAaac < 1:2060967/140‑1 (MQ=255)
gCCGGCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAaacaa < 2:1179425/140‑1 (MQ=255)
ggCAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTg < 1:31835/140‑1 (MQ=255)
cAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCg < 1:1436711/140‑1 (MQ=255)
cAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCg < 1:684476/140‑1 (MQ=255)
cAGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCg < 2:1788235/140‑1 (MQ=255)
aaGGAACAAAGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCAACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCg < 2:1098493/139‑1 (MQ=255)
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ACGCGGACCGAAGGTCAGGGTATTATCTGCATGTTTAACTTCAACAGCATCGTTGAGAGTACGAGTCAGCTCGCCGTTTTTACCTTTGATCGTAATAACCTGACCGTTGATTTTTACGTCAACGCCGGCAGGAACAACGACCGGTGCTTTAGCAACACGAGACATTTTTTCCTCCGATTAGGCTACGTAGCAGATAATTTCGCCACCAAGACCAGCCTGGCGCGCTGCACGATCAGTCATAACACCTTTAGAGGTAGAAACAACTGCG > NC_000913/3445976‑3446243
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
