Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F48 I1 R1	66	101.5	3442112	98.9%	3404248	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,001,682	G→T	W446C (TGG→TGT)	xdhA →	putative xanthine dehydrogenase molybdenum‑binding subunit XdhA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,001,682	0	G	T	100.0%	210.6 / NA	60	W446C (TGG→TGT)	xdhA	putative xanthine dehydrogenase molybdenum‑binding subunit XdhA
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (25/35); total (25/35)

CAGGGTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGGCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGTGGGGG  >  NC_000913/3001546‑3001818

cAGGGTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCt                                                                                                                                       >  2:1303920/1‑140 (MQ=255)

  gggTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTCCACCTCTAACACCGGTCCTGt                                                                                                                                     <  2:721258/140‑1 (MQ=255)

  gggTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAACGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACAcctgtcctgt                                                                                                                                     >  2:1418859/1‑140 (MQ=255)

     ttGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCgg                                                                                                                                  <  2:300718/140‑1 (MQ=255)

     ttGCCGGAGTGTCTTGAAAAAGGCCCGAAAATCTTTGAATGGTAAAAACGCCGTGGAGAATGCCCGAGTTAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCgg                                                                                                                                  <  2:1164828/140‑1 (MQ=255)

      tGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGc                                                                                                                                 <  1:1101463/140‑1 (MQ=255)

      tGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGc                                                                                                                                 <  1:117889/140‑1 (MQ=255)

      tGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGc                                                                                                                                 <  1:1235162/140‑1 (MQ=255)

       gCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCg                                                                                                                                <  2:235830/140‑1 (MQ=255)

       gCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCg                                                                                                                                <  2:480252/140‑1 (MQ=255)

        ccGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGt                                                                                                                               >  2:724014/1‑140 (MQ=255)

             gtgtCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGaaa                                                                                                                          >  1:1529549/1‑140 (MQ=255)

             gtgtCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGaaa                                                                                                                          >  1:1564306/1‑140 (MQ=255)

             gtgtCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGaaa                                                                                                                          >  1:945189/1‑140 (MQ=255)

                tCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAg                                                                                                                       >  1:1118966/1‑140 (MQ=255)

                tCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAg                                                                                                                       >  2:563972/1‑140 (MQ=255)

                   tGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAg                                                                                                                    >  1:970960/1‑140 (MQ=255)

                        aaGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcg                                                                                                               <  2:233222/140‑1 (MQ=255)

                        aaGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcg                                                                                                               >  1:895050/1‑140 (MQ=255)

                        aaGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcg                                                                                                               <  2:1022589/140‑1 (MQ=255)

                        aaGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcg                                                                                                               <  1:407383/140‑1 (MQ=255)

                         aGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcgc                                                                                                              <  2:1084993/140‑1 (MQ=255)

                          ggCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcgcg                                                                                                             >  2:1090981/1‑140 (MQ=255)

                          ggCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGATTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGgcgcgcg                                                                                                             >  1:831936/1‑140 (MQ=255)

                            ccGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGcc                                                                                                           <  1:1684090/140‑1 (MQ=255)

                                  aaTCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCtga                                                                                                     <  1:363382/140‑1 (MQ=255)

                                  aaTCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCtga                                                                                                     <  1:1294173/140‑1 (MQ=255)

                                  aaTCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCtga                                                                                                     <  1:793393/140‑1 (MQ=255)

                                       ttGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAAt                                                                                                <  2:1529549/140‑1 (MQ=255)

                                       ttGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAAt                                                                                                <  2:866117/140‑1 (MQ=255)

                                       ttGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAAt                                                                                                <  1:1310835/140‑1 (MQ=255)

                                       ttGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAAt                                                                                                <  2:895050/140‑1 (MQ=255)

                                       ttGAACGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAAt                                                                                                <  1:1418859/140‑1 (MQ=255)

                                          aaTGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATATGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAg                                                                                             >  1:1223696/1‑140 (MQ=255)

                                           aTGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAgg                                                                                            <  1:724014/140‑1 (MQ=255)

                                            tGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAggt                                                                                           >  2:553100/1‑139 (MQ=255)

                                            agggAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGa                                                                                           <  2:1353209/139‑1 (MQ=255)

                                              ggAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGAt                                                                                          >  1:205991/1‑139 (MQ=255)

                                              ggAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGAt                                                                                          <  2:205991/139‑1 (MQ=255)

                                                         gTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAAc                                                                              >  1:311251/1‑140 (MQ=255)

                                                          tGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACg                                                                             >  1:896612/1‑140 (MQ=255)

                                                          tGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACg                                                                             >  1:299475/1‑140 (MQ=255)

                                                                    cAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAgcgg                                                                   <  1:1090981/140‑1 (MQ=255)

                                                                      gAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAgcggcg                                                                 <  1:478284/140‑1 (MQ=255)

                                                                           aGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACg                                                            >  1:1025894/1‑140 (MQ=255)

                                                                           aGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACg                                                            >  1:452681/1‑140 (MQ=255)

                                                                           aGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACg                                                            >  2:408405/1‑140 (MQ=255)

                                                                                  cAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCg                                                     >  2:1476951/1‑140 (MQ=255)

                                                                                     tttGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTc                                                  <  2:970960/140‑1 (MQ=255)

                                                                                        gcgcCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAgg                                               <  2:299475/140‑1 (MQ=255)

                                                                                        gcgcCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAgg                                               <  1:635868/140‑1 (MQ=255)

                                                                                        gcgcCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAgg                                               <  2:896612/140‑1 (MQ=255)

                                                                                           ccgcGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTg                                            <  2:957542/140‑1 (MQ=255)

                                                                                            cgcgGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAggggtg                                           >  1:400914/1‑137 (MQ=255)

                                                                                               ggcgTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGa                                        <  1:374253/140‑1 (MQ=255)

                                                                                                     ggCGTCGCCTGATTTAGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGt                                  <  2:831936/140‑1 (MQ=255)

                                                                                                                  ttAGCTACCCCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCTACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGTCACCGTCTTCTCGCAAAtg                     <  2:1223696/140‑1 (MQ=255)

                                                                                                                    aGCTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCACAtggt                   <  2:1118966/140‑1 (MQ=255)

                                                                                                                      cTACACCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAAtggtgg                 >  2:547106/1‑140 (MQ=255)

                                                                                                                         cacCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCGGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAg              >  1:349653/1‑140 (MQ=255)

                                                                                                                          acCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTTGCAGa             >  2:732879/1‑140 (MQ=255)

                                                                                                                          acCTCTAACACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGa             <  1:563972/140‑1 (MQ=255)

                                                                                                                                aaCACCTGTCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGt       <  2:311251/140‑1 (MQ=255)

                                                                                                                                     ctgtcctgtcGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGTggggg  <  1:1556827/140‑1 (MQ=255)

CAGGGTTGCCGGAGTGTCTTGAAAAAGGCCGGAAAATCTTTGAATGGGAAAAACGCCGTGCAGAATGCCAGAACCAGCAAGGCAATTTGCGCCGCGGCGTTGGCGTCGCCTGTTTTAGCTACACCTCTAACACCTGGCCTGTCGGCGTAGAAATAGCAGGCGCGCGCCTTCTGATGAATCAGGATGGAACCATCAACGTGCAAAGCGGCGCGACGGAAATCGGTCAGGGTGCCGACACCGTCTTCTCGCAAATGGTGGCAGAAACCGTGGGGG  >  NC_000913/3001546‑3001818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A