Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F48 I1 R1	66	101.5	3442112	98.9%	3404248	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,050,444	G→T	A75E (GCG→GAG)	gcvT ←	aminomethyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,050,444	0	G	T	100.0%	337.5 / NA	95	A75E (GCG→GAG)	gcvT	aminomethyltransferase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (48/47); total (48/47)

CGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCG  >  NC_000913/3050313‑3050578

cgcgGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGACATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATct                                                                                                                                >  2:592298/1‑139 (MQ=255)

 gcgGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGt                                                                                                                               >  1:1656482/1‑140 (MQ=255)

       ggCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCca                                                                                                                         <  2:1101078/140‑1 (MQ=255)

       ggCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCca                                                                                                                         <  2:515946/140‑1 (MQ=255)

       ggCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCca                                                                                                                         <  2:1656482/140‑1 (MQ=255)

                 acaacGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACg                                                                                                               <  2:1649307/140‑1 (MQ=255)

                     cGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGa                                                                                                           <  2:835790/140‑1 (MQ=255)

                     cGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGa                                                                                                           <  2:1222265/140‑1 (MQ=255)

                     agAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGa                                                                                                           <  2:708632/139‑1 (MQ=255)

                      gAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGaa                                                                                                          >  1:1413033/1‑140 (MQ=255)

                       aGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGaaa                                                                                                         >  1:363646/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCTGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:1615727/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  1:778580/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:1498522/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:1409117/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:171206/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:227262/1‑140 (MQ=255)

                        ggCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAAc                                                                                                        >  2:614017/1‑140 (MQ=255)

                          cGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTc                                                                                                      >  1:277374/1‑140 (MQ=255)

                                       cAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTg                                                                                         >  1:1519558/1‑140 (MQ=255)

                                       cAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTg                                                                                         >  2:343002/1‑140 (MQ=255)

                                          tAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCt                                                                                          >  1:500195/1‑136 (MQ=255)

                                          tAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCt                                                                                          <  2:500195/136‑1 (MQ=255)

                                          tAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCcg                                                                                      >  2:1483994/1‑140 (MQ=255)

                                            aaGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCcgcg                                                                                    <  2:175558/140‑1 (MQ=255)

                                            aaGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCcgcg                                                                                    <  2:1278202/140‑1 (MQ=255)

                                            aaGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCcgcg                                                                                    <  2:363646/140‑1 (MQ=255)

                                                   agACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcg                                                                             >  1:201166/1‑140 (MQ=255)

                                                    gACGATGAGGTCATCTATCGCACCGCCAGATGCATTCAACATCCGCGAGTAAAGGGGTTTGACGCGTTTGGTGAGCTTCTCCACGTCGTTCGCCAGCAGATAACGCAGAAGCTCCCGGGTGCGGCTGCCGCGAAggtgtc                                                                            >  1:1619297/1‑135 (MQ=255)

                                                    gACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcga                                                                            >  1:1638396/1‑140 (MQ=255)

                                                    gACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcga                                                                            <  2:1519558/140‑1 (MQ=255)

                                                    gACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcga                                                                            >  2:1588457/1‑140 (MQ=255)

                                                    gACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcga                                                                            >  2:914942/1‑140 (MQ=255)

                                                      cGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacg                                                                          <  1:349465/140‑1 (MQ=255)

                                                      cGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacg                                                                          <  1:437327/140‑1 (MQ=255)

                                                      cGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacg                                                                          <  1:1694962/140‑1 (MQ=255)

                                                      cGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacg                                                                          <  1:1615727/140‑1 (MQ=255)

                                                      agATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacg                                                                          <  2:277374/139‑1 (MQ=255)

                                                       gATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacga                                                                         <  1:120665/140‑1 (MQ=255)

                                                       gATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacga                                                                         <  2:56814/140‑1 (MQ=255)

                                                       gATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATcgacga                                                                         >  1:1346489/1‑140 (MQ=255)

                                                         tGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATg                                                                       <  1:1293253/140‑1 (MQ=255)

                                                         tGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATg                                                                       >  2:1675942/1‑140 (MQ=255)

                                                         tGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATg                                                                       >  2:1208944/1‑140 (MQ=255)

                                                         tGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATg                                                                       >  1:1319867/1‑140 (MQ=255)

                                                         tGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATg                                                                       >  1:53049/1‑140 (MQ=255)

                                                          gAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATgg                                                                      <  2:930579/140‑1 (MQ=255)

                                                          gAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATgg                                                                      <  2:778580/140‑1 (MQ=255)

                                                          gAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATgg                                                                      <  2:148833/140‑1 (MQ=255)

                                                          gAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATgg                                                                      <  2:1463982/140‑1 (MQ=255)

                                                          gAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATgg                                                                      <  2:1342861/140‑1 (MQ=255)

                                                              tCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCat                                                                  <  1:171206/140‑1 (MQ=255)

                                                                    aTCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGa                                                            <  1:914942/140‑1 (MQ=255)

                                                                    aTCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGa                                                            <  2:1413033/140‑1 (MQ=255)

                                                                     tCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGCGCTTAGCCGCTTTTAATGAGCTCCACCACATCGTTCGCCAGCAGATAACGCAGAAACTACCGGTTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTCac                                                           >  2:570400/1‑140 (MQ=255)

                                                                       acacCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCGGCCGCGAAGATCGACGATGGTCATATGTGacac                                                         >  1:1592218/1‑140 (MQ=255)

                                                                          ccGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATc                                                      >  1:321467/1‑140 (MQ=255)

                                                                           cGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCa                                                     >  2:1293405/1‑140 (MQ=255)

                                                                           cGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCa                                                     <  1:1293405/140‑1 (MQ=255)

                                                                           cGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCa                                                     >  2:1632706/1‑140 (MQ=255)

                                                                             ccAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCaaa                                                   >  2:208840/1‑140 (MQ=255)

                                                                             ccAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCaaa                                                   >  2:971479/1‑140 (MQ=255)

                                                                             ccAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCaaa                                                   >  2:88973/1‑140 (MQ=255)

                                                                             ccAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCaaa                                                   >  2:143194/1‑140 (MQ=255)

                                                                                 agGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACAtt                                               >  1:668202/1‑140 (MQ=255)

                                                                                   gCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTcc                                             <  2:1638396/140‑1 (MQ=255)

                                                                                    cATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCg                                            <  1:1498522/140‑1 (MQ=255)

                                                                                     aTTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCgg                                           <  1:343002/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  2:248053/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  1:614017/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         >  2:1100622/1‑140 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  2:53049/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  1:1483994/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  1:971479/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  1:1525634/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  2:201166/140‑1 (MQ=255)

                                                                                       tCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCa                                         <  1:208840/140‑1 (MQ=255)

                                                                                            aTCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGgt                                    <  1:1588457/140‑1 (MQ=255)

                                                                                              ccccGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGgtac                                  >  1:1484504/1‑140 (MQ=255)

                                                                                              ccccGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGgtac                                  >  1:1101814/1‑140 (MQ=255)

                                                                                                ccGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGgtacgt                                >  1:826604/1‑140 (MQ=255)

                                                                                                 cGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGgtacgta                               >  1:1522462/1‑140 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        >  1:77264/1‑140 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        >  2:910305/1‑140 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        >  1:722946/1‑140 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        >  2:964218/1‑140 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        <  1:1409117/140‑1 (MQ=255)

                                                                                                        aGGGCTTTGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCatg                        <  1:227262/140‑1 (MQ=255)

                                                                                                              ttGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtc                  >  1:1507869/1‑140 (MQ=255)

                                                                                                               tGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtct                 >  2:1567704/1‑139 (MQ=255)

                                                                                                               tGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtcg                 >  2:350984/1‑140 (MQ=255)

                                                                                                               tGCCGCTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTtcg                 <  1:88973/140‑1 (MQ=255)

                                                                                                                    cTTTTGGTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGAt            <  1:1632706/140‑1 (MQ=255)

                                                                                                                         ggTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCg       <  2:1319867/140‑1 (MQ=255)

                                                                                                                         ggTGAGCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCg       <  2:722946/140‑1 (MQ=255)

                                                                                                                              gCTTCTCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCg  >  1:254985/1‑140 (MQ=255)

CGCGGGTGGCGGAGTTAACAACGAGGCGGAAGAAATCTTCAGTAAAGTAGTAGACGATGAGGTCATCTATCACACCGCCAGAGGCATTCAACATCCCCGAGTAAAGGGCTTTGCCGCTTTTGGTGAGCTTCGCCACATCGTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCG  >  NC_000913/3050313‑3050578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A