Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A18 F48 I1 R1
|
70 |
76.3 |
2572620 |
98.7% |
2539175 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,050,586 |
G→T |
L28M (CTG→ATG) |
gcvT ← |
aminomethyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,050,586 | 0 | G | T | 100.0%
| 254.5
/ NA
| 71 | L28M (CTG→ATG) | gcvT | aminomethyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (39/32); total (39/32) |
GTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTGAAATTATCA > NC_000913/3050452‑3050720
|
gTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGca < 1:552963/140‑1 (MQ=255)
ttCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGcat > 2:397207/1‑140 (MQ=255)
cagcagATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATcc > 2:560920/1‑140 (MQ=255)
cagcagATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATcc > 2:384637/1‑140 (MQ=255)
agcagATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAATCGTAATGCATCGGCATCATCCa > 1:1073491/1‑140 (MQ=255)
gcagATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAg < 1:164112/140‑1 (MQ=255)
gATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACAGTCCGACATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCGTCGGCATCATCCAGCCg < 2:1126310/140‑1 (MQ=255)
aTAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGt < 2:710206/140‑1 (MQ=255)
cGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGaa > 1:677883/1‑140 (MQ=255)
cGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGaa > 2:246256/1‑140 (MQ=255)
cGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGACATCATCCAGCCGTGGaa > 2:542696/1‑140 (MQ=255)
cAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAAt > 1:1278285/1‑140 (MQ=255)
aGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATc > 2:619125/1‑140 (MQ=255)
aGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATc > 1:973038/1‑140 (MQ=255)
aGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATc > 2:118292/1‑140 (MQ=255)
aaCTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATccac > 2:370747/1‑140 (MQ=255)
cccGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATg > 2:292413/1‑140 (MQ=255)
ggTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATTTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGTAATCCACCATGCGAg < 2:308112/140‑1 (MQ=255)
ggTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAg > 1:1046785/1‑140 (MQ=255)
gatGCGACTGCCGCAAAGATCTACGATGGTCATATGTGACACATAAAACATTCCGCCATCGGTACGTACCGCATAATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAg < 2:1033128/138‑1 (MQ=255)
gTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAgc > 1:842783/1‑140 (MQ=255)
ggCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGcgccg > 2:77871/1‑140 (MQ=255)
gCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGcgccgc < 1:982844/140‑1 (MQ=255)
tGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCaa < 1:239070/140‑1 (MQ=255)
tGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCaa < 2:1225181/140‑1 (MQ=255)
tGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCaa < 1:77871/140‑1 (MQ=255)
cgacgaTGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGtgttgt < 1:875568/140‑1 (MQ=255)
cgacgaTGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGtgttgt < 2:859924/140‑1 (MQ=255)
cgacgaTGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGtgttgt < 2:627117/140‑1 (MQ=255)
tGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTAc > 1:840379/1‑140 (MQ=255)
ggTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACa < 1:587978/140‑1 (MQ=255)
tatGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCTACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGa < 1:1151036/140‑1 (MQ=255)
tgACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCt > 1:1106217/1‑140 (MQ=255)
gACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtg < 2:1278285/140‑1 (MQ=255)
acacATCAAACATTCCGGCATCGGTTCGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 2:1004838/1‑140 (MQ=255)
acacATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 2:236298/1‑140 (MQ=255)
acacATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 2:241626/1‑140 (MQ=255)
acacATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 2:353276/1‑140 (MQ=255)
acacATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 1:306093/1‑140 (MQ=255)
acacATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgt > 2:809583/1‑140 (MQ=255)
cacaTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgtt < 1:1094500/140‑1 (MQ=255)
cacaTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgtt < 1:215113/140‑1 (MQ=255)
aacaTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCtgtt < 2:399449/139‑1 (MQ=255)
aTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTtgtg > 2:116866/1‑140 (MQ=255)
aTCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTtgtg < 1:210399/140‑1 (MQ=255)
cAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGcc > 2:942752/1‑140 (MQ=255)
cAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGcc < 1:32516/140‑1 (MQ=255)
tCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGt < 1:292413/140‑1 (MQ=255)
tCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGt > 2:447919/1‑140 (MQ=255)
ccGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTc > 2:849136/1‑140 (MQ=255)
ccGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTc < 1:905887/140‑1 (MQ=255)
ccGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTc > 1:636612/1‑140 (MQ=255)
ccGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTc < 1:353821/140‑1 (MQ=255)
ccGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGGTGTGCCATCTTGTc > 1:1251847/1‑140 (MQ=255)
ccGGCATCGGAACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCTTGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTc > 2:210705/1‑140 (MQ=255)
ggCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCt > 1:160269/1‑140 (MQ=255)
cATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTAGTGCCATCTTGTCCTCa < 1:370747/140‑1 (MQ=255)
ggTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGa < 1:1282222/140‑1 (MQ=255)
ggTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGa < 1:291590/140‑1 (MQ=255)
gtacgtacCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGaa > 1:1031651/1‑140 (MQ=255)
acCGCATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCg < 2:306093/140‑1 (MQ=255)
cATGATGTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGc > 1:303907/1‑140 (MQ=255)
atgatgTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCt > 1:712129/1‑140 (MQ=255)
atgatgTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCt > 2:459182/1‑140 (MQ=255)
atgatgTTCGTCGATTTGCGAACCGTAATGCATCGG‑‑‑CATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGAc > 2:1108232/1‑140 (MQ=255)
atgTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGAc < 1:116866/140‑1 (MQ=255)
tgTTCGTCGATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACa > 2:1092641/1‑140 (MQ=255)
tcgtcgATTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACt > 1:588208/1‑140 (MQ=255)
aTTTGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCa < 2:931456/140‑1 (MQ=255)
ttGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATg < 2:973038/140‑1 (MQ=255)
ttGCGAACCGTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATg < 1:179545/140‑1 (MQ=255)
gTAATGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTGAAATTa > 1:973853/1‑140 (MQ=255)
aTGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGTGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTGAAATTATca < 1:888254/140‑1 (MQ=255)
aTGCATCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTGAAATTATca < 1:139115/140‑1 (MQ=255)
|
GTTCGCCAGCAGATAACGCAGAAACTCCCGGGTGCGGCTGCCGCGAAGATCGACGATGGTCATATGTGACACATCAAACATTCCGGCATCGGTACGTACCGCATGATGTTCGTCGATTTGCGAACCGTAATGCAGCGGCATCATCCAGCCGTGGAAATCCACCATGCGAGCGCCGCAAAGCGTGTGTTGTTCGTACAAAGGAGTCTGTTGTGCCATCTTGTCCTCATTGAATAAGCGGGGCTGACAACTTTTTCATGGTGAAATTATCA > NC_000913/3050452‑3050720
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
