Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F48 I1 R1
|
66 |
101.5 |
3442112 |
98.9% |
3404248 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,520,577 |
G→T |
Q43K (CAG→AAG) |
hofQ ← |
DNA utilization protein HofQ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,520,577 | 0 | G | T | 100.0%
| 424.0
/ NA
| 118 | Q43K (CAG→AAG) | hofQ | DNA utilization protein HofQ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (62/56); total (62/56) |
Only 100 of 119 total aligned reads displayed.
TTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTCC > NC_000913/3520444‑3520713
|
cTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTcagccagc > 2:292087/1‑140 (MQ=255)
ttCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAgcg < 1:834077/140‑1 (MQ=255)
ttCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAgcg < 2:688651/140‑1 (MQ=255)
gCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGc < 1:1075770/140‑1 (MQ=255)
gCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGc < 1:1720331/140‑1 (MQ=255)
gCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGc < 2:262657/140‑1 (MQ=255)
gCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGc < 1:1402085/140‑1 (MQ=255)
tCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACGCCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGa < 2:556442/140‑1 (MQ=255)
ccGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTAc > 2:516635/1‑140 (MQ=255)
cGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTAcc > 2:351210/1‑140 (MQ=255)
cGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTAcc > 1:1665190/1‑140 (MQ=255)
gcgcTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCgg > 1:1291199/1‑140 (MQ=255)
cgcTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGa < 2:7568/140‑1 (MQ=255)
cgcTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGa < 1:1006329/140‑1 (MQ=255)
tttCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGt < 2:866178/140‑1 (MQ=255)
tttCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGt < 2:362007/140‑1 (MQ=255)
tCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCa < 2:514258/140‑1 (MQ=255)
tACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATcca > 1:1267373/1‑140 (MQ=255)
tACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATcca > 2:1715553/1‑140 (MQ=255)
aGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATccacca > 2:1271923/1‑140 (MQ=255)
tttGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATc > 2:1256510/1‑140 (MQ=255)
tttGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATc > 2:791811/1‑140 (MQ=255)
tttGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATc > 2:814669/1‑140 (MQ=255)
tGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAg > 1:1566385/1‑140 (MQ=255)
tGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAg > 2:89663/1‑140 (MQ=255)
tGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCa < 1:791811/140‑1 (MQ=255)
tGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCa > 2:822078/1‑140 (MQ=255)
gCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCAc > 2:1186105/1‑140 (MQ=255)
ccTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACt > 1:900784/1‑140 (MQ=255)
ccTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACt > 1:1250737/1‑140 (MQ=255)
gCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACtttt > 1:1243743/1‑140 (MQ=255)
ccAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCg < 2:990121/140‑1 (MQ=255)
gggAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCt > 2:458869/1‑140 (MQ=255)
ggAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCtt > 1:64238/1‑140 (MQ=255)
ggAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCtt > 1:383355/1‑140 (MQ=255)
aCATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCATGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgc < 2:1273230/140‑1 (MQ=255)
aCATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgc < 2:900784/140‑1 (MQ=255)
cATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgcc > 1:389800/1‑140 (MQ=255)
cATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgcc > 2:1641036/1‑140 (MQ=255)
cATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgcc > 1:1705346/1‑140 (MQ=255)
cATCTGTTAGATGTAACGACACCGTACCGCTGAAGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTgcc > 1:145184/1‑140 (MQ=255)
aGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTAc > 1:549787/1‑140 (MQ=255)
aTGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGTAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGc > 2:780404/1‑140 (MQ=255)
aTGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGc > 2:1512437/1‑140 (MQ=255)
aTGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGc < 1:822078/140‑1 (MQ=255)
aTGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGc < 2:1250737/140‑1 (MQ=255)
aTGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGc > 1:1466741/1‑140 (MQ=255)
tGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGcc < 1:996464/140‑1 (MQ=255)
tAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCgg < 2:1705346/140‑1 (MQ=255)
aaCGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCggg > 1:625011/1‑140 (MQ=255)
aaCGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCggg > 1:905337/1‑140 (MQ=255)
aaCGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCggg > 1:536803/1‑140 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGtt > 1:950269/1‑139 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa < 2:1665190/140‑1 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa < 2:383355/140‑1 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa > 2:232712/1‑140 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa < 2:1243743/140‑1 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa < 1:79741/140‑1 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa > 1:447977/1‑140 (MQ=255)
cGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCAC‑TTTTGCGGCTTTGCCGCCTGTACGCCGGGTAt > 1:67275/1‑140 (MQ=255)
agACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTa < 2:64238/139‑1 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa < 1:1271923/140‑1 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa < 2:1267373/140‑1 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa > 2:762438/1‑140 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa < 1:1706126/140‑1 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa < 1:814669/140‑1 (MQ=255)
cacCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTCCTCCTTTTCAGCCAGCG‑CTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAg > 2:286896/1‑140 (MQ=255)
acCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAg > 2:588804/1‑140 (MQ=255)
acCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAg > 1:741026/1‑140 (MQ=255)
ccGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGc < 1:1027824/140‑1 (MQ=255)
ccGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGc < 2:620571/140‑1 (MQ=255)
ccGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGc < 2:549787/140‑1 (MQ=255)
acGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGc < 2:901428/139‑1 (MQ=255)
gTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCAt < 1:516635/140‑1 (MQ=255)
tACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCa > 2:576690/1‑135 (MQ=255)
tACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATc > 1:512986/1‑140 (MQ=255)
tACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATc > 2:1112752/1‑140 (MQ=255)
ccGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCaa < 2:1291199/140‑1 (MQ=255)
cTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACag > 2:828280/1‑140 (MQ=255)
cTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACag > 1:824789/1‑140 (MQ=255)
gACGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACagta > 1:984389/1‑140 (MQ=255)
aCGTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACagtat > 2:230568/1‑139 (MQ=255)
gTCTGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTg < 2:389800/140‑1 (MQ=255)
tGGCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCgg < 1:1614256/140‑1 (MQ=255)
ggCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGc > 1:1371750/1‑140 (MQ=255)
gCGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCt > 1:1261365/1‑140 (MQ=255)
cGACACGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTa > 2:413338/1‑140 (MQ=255)
cacGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATcc < 1:1258321/140‑1 (MQ=255)
acGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCa < 2:501121/140‑1 (MQ=255)
acGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCa > 2:852989/1‑140 (MQ=255)
cGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCAt < 1:588804/140‑1 (MQ=255)
cGACCAGGTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCAt < 1:1186105/140‑1 (MQ=255)
gACCAGTTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCAtt < 2:1261365/140‑1 (MQ=255)
ggTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTc < 2:145184/140‑1 (MQ=255)
ggTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTc < 2:447977/140‑1 (MQ=255)
gTTCAACTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCa < 1:230568/140‑1 (MQ=255)
cTTCTCCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTa > 1:561420/1‑140 (MQ=255)
tcCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTAtctc > 1:1351291/1‑140 (MQ=255)
tcCTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGCAGTGCGGCTATCCATTGATTCATTTTTAtctc > 2:955451/1‑140 (MQ=255)
ccTTTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTcc < 1:1408755/140‑1 (MQ=255)
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TTGCCTTCCTGCCGCGTTATCAGTCCGGCGCTTTTCACTACAGTTTGTAGTGCCTGCTTCCAGGGAACATCTGTTAGATGTAACGACACCGTACCGCTGACGTCTGGCGACACGACCAGGTTCAACTTCTCCTGTTCAGCCAGCGCCTGCAACACCTGAGCTACCGGAACGTCATCCACCATCAGCGTCACTTTTTGCGGCTTTGCCGCCTGTACGCCGGGTATCAGCATCAACAGTAGTGCGGCTATCCATTGCTTCATTTGTATCTCC > NC_000913/3520444‑3520713
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
