Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F48 I1 R1 66 101.5 3442112 98.9% 3404248 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,896,216 C→A V132F (GTT→TTT)  adeP ← adenine:H(+) symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,896,2160CA100.0% 368.9 / NA 103V132F (GTT→TTT) adePadenine:H(+) symporter
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (56/47);  total (56/47)

Only 100 of 105 total aligned reads displayed.

GATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC  >  NC_000913/3896079‑3896351
                                                                                                                                         |                                                                                                                                       
gATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAagc                                                                                                                                       >  2:409779/1‑140 (MQ=255)
   gCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGa                                                                                                                                    <  1:290663/140‑1 (MQ=255)
    cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaa                                                                                                                                   >  1:993225/1‑140 (MQ=255)
    cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaa                                                                                                                                   >  2:1393687/1‑140 (MQ=255)
    cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaa                                                                                                                                   >  1:292622/1‑140 (MQ=255)
    cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaa                                                                                                                                   >  2:402930/1‑140 (MQ=255)
    cTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaa                                                                                                                                   >  1:1330189/1‑140 (MQ=255)
      cACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaaaa                                                                                                                                 >  2:1111211/1‑140 (MQ=255)
      cACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaaaa                                                                                                                                 <  2:1220511/140‑1 (MQ=255)
      cACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGaaaa                                                                                                                                 <  2:292622/140‑1 (MQ=255)
       aCCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAAt                                                                                                                                >  1:693472/1‑140 (MQ=255)
        ccAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATc                                                                                                                               >  1:1126735/1‑140 (MQ=255)
           gCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTc                                                                                                                            >  2:1643742/1‑140 (MQ=255)
            cGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCa                                                                                                                           >  1:138301/1‑140 (MQ=255)
            cGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCa                                                                                                                           >  1:1418392/1‑140 (MQ=255)
             gTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAg                                                                                                                          <  2:1126735/140‑1 (MQ=255)
              tttCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGt                                                                                                                         >  2:1080218/1‑140 (MQ=255)
                tCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTaa                                                                                                                       >  1:348610/1‑140 (MQ=255)
                tCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTaa                                                                                                                       >  1:143808/1‑140 (MQ=255)
                   gggTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAAcag                                                                                                                    <  1:1720844/140‑1 (MQ=255)
                              aaTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcg                                                                                                         <  2:22976/140‑1 (MQ=255)
                              aaTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcg                                                                                                         <  2:143808/140‑1 (MQ=255)
                              aaTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcg                                                                                                         <  1:1113671/140‑1 (MQ=255)
                              aaTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcg                                                                                                         <  2:1124147/140‑1 (MQ=255)
                               aTCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcgc                                                                                                        >  1:826432/1‑140 (MQ=255)
                                tCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcgcg                                                                                                       <  2:826432/140‑1 (MQ=255)
                                tCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATcgcg                                                                                                       <  2:617017/140‑1 (MQ=255)
                                         cGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCagaag                                                                                              >  2:196307/1‑140 (MQ=255)
                                         cGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCagaag                                                                                              >  1:766532/1‑140 (MQ=255)
                                          gTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCagaaga                                                                                             <  1:1111211/140‑1 (MQ=255)
                                           tttttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGAt                                                                                            <  1:204244/140‑1 (MQ=255)
                                           tttttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGAt                                                                                            <  1:829754/140‑1 (MQ=255)
                                              ttCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTgc                                                                                         >  1:988761/1‑140 (MQ=255)
                                               tCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTgcg                                                                                        <  1:352516/140‑1 (MQ=255)
                                                cAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTgcgc                                                                                       <  1:243843/140‑1 (MQ=255)
                                                 aGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGcc                                                                                      <  1:430501/140‑1 (MQ=255)
                                                   ccccATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGccct                                                                                    >  2:1573842/1‑139 (MQ=255)
                                                   ccccATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCa                                                                                    <  2:102453/140‑1 (MQ=255)
                                                    cccATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCAt                                                                                   <  2:499595/140‑1 (MQ=255)
                                                      catcatGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATcc                                                                                 <  2:988761/140‑1 (MQ=255)
                                                         aatGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGa                                                                              <  2:151548/139‑1 (MQ=255)
                                                             ccAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTg                                                                          >  1:298778/1‑140 (MQ=255)
                                                             ccAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTg                                                                          >  1:264091/1‑140 (MQ=255)
                                                                 tGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCAc                                                                      >  1:1497116/1‑140 (MQ=255)
                                                                   aaCAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACgg                                                                    >  1:1288863/1‑140 (MQ=255)
                                                                     aaGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCa                                                                  <  2:480496/139‑1 (MQ=255)
                                                                      aGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCaa                                                                 >  2:166099/1‑140 (MQ=255)
                                                                      aGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCaa                                                                 >  1:1328067/1‑140 (MQ=255)
                                                                        aCCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGc                                                               >  1:93754/1‑140 (MQ=255)
                                                                          cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGccc                                                             <  1:1080218/140‑1 (MQ=255)
                                                                          cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGccc                                                             >  2:930710/1‑140 (MQ=255)
                                                                          cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGccc                                                             <  2:1418392/140‑1 (MQ=255)
                                                                          cGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGccc                                                             <  1:409779/140‑1 (MQ=255)
                                                                            aTACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCAt                                                           <  2:93754/140‑1 (MQ=255)
                                                                            aTACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCAt                                                           <  1:1489744/140‑1 (MQ=255)
                                                                            aTACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCAt                                                           <  1:402930/140‑1 (MQ=255)
                                                                            aTACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCAt                                                           <  2:1047593/140‑1 (MQ=255)
                                                                             tACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATc                                                          >  2:1189101/1‑140 (MQ=255)
                                                                             tACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATc                                                          >  1:223617/1‑140 (MQ=255)
                                                                             tACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATc                                                          >  1:757027/1‑140 (MQ=255)
                                                                               ccGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGc                                                        <  1:196307/140‑1 (MQ=255)
                                                                                  cTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCtt                                                     >  2:305582/1‑139 (MQ=255)
                                                                                  cTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTg                                                     >  1:1172323/1‑140 (MQ=255)
                                                                                       aaTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACaa                                                <  1:166099/140‑1 (MQ=255)
                                                                                       aaTACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACaa                                                >  2:180666/1‑140 (MQ=255)
                                                                                          aCCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGa                                             <  1:305582/140‑1 (MQ=255)
                                                                                           cccACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGAc                                            >  2:1279769/1‑140 (MQ=255)
                                                                                             cacaCGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaa                                          >  1:274081/1‑140 (MQ=255)
                                                                                               cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaaa                                        >  2:567369/1‑140 (MQ=255)
                                                                                               cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaaa                                        >  1:1495715/1‑140 (MQ=255)
                                                                                               cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaaa                                        >  2:43424/1‑140 (MQ=255)
                                                                                               cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaaa                                        >  2:1043696/1‑140 (MQ=255)
                                                                                               cacGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACaaaa                                        >  1:732345/1‑140 (MQ=255)
                                                                                                acGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAg                                       >  1:683737/1‑140 (MQ=255)
                                                                                                 cGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGc                                      <  2:766532/140‑1 (MQ=255)
                                                                                                   cAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCga                                    <  1:930710/140‑1 (MQ=255)
                                                                                                      aCTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaaga                                 >  1:191700/1‑140 (MQ=255)
                                                                                                       cTCACCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCgaagaa                                <  1:1643742/140‑1 (MQ=255)
                                                                                                         cgacGGAAAGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACg                              <  2:1495715/137‑1 (MQ=255)
                                                                                                          aCCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGc                             >  2:886996/1‑140 (MQ=255)
                                                                                                          aCCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGc                             >  1:753037/1‑140 (MQ=255)
                                                                                                          aCCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGc                             >  2:697073/1‑140 (MQ=255)
                                                                                                          aCCGGAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGc                             >  2:381155/1‑140 (MQ=255)
                                                                                                             ggAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                          <  2:695764/140‑1 (MQ=255)
                                                                                                             ggAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                          <  1:697073/140‑1 (MQ=255)
                                                                                                             ggAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                          <  1:148483/140‑1 (MQ=255)
                                                                                                             ggAATGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCAtt                          <  2:1330189/140‑1 (MQ=255)
                                                                                                                 tGTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTATACAACGACAAAAGCGAAGAACGCATTCAgg                      >  2:216448/1‑140 (MQ=255)
                                                                                                                  gTTGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGc                     >  2:596441/1‑140 (MQ=255)
                                                                                                                    tGGCTATCATCCAGTAGCGAAAGCGGAAAATTGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGccc                   >  2:200101/1‑140 (MQ=255)
                                                                                                                    tGGCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGccc                   <  2:1497116/140‑1 (MQ=255)
                                                                                                                     ggCTATCATCCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCa                  <  1:886996/140‑1 (MQ=255)
                                                                                                                           catcCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCgg            >  1:1697586/1‑140 (MQ=255)
                                                                                                                             tcCAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGt          <  2:693472/140‑1 (MQ=255)
                                                                                                                               cAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGc        <  1:180666/140‑1 (MQ=255)
                                                                                                                               cAGTAGCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGc        <  1:567369/140‑1 (MQ=255)
                                                                                                                                    gCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTg   >  2:253959/1‑140 (MQ=255)
                                                                                                                                    gCGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTg   <  2:1172323/140‑1 (MQ=255)
                                                                                                                                     cGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc  >  1:966927/1‑140 (MQ=255)
                                                                                                                                     cGAAAGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGc  >  1:1103229/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
GATGCTCACCAGCGTTTCCGGGTTAGCGACAATCACACCTGCGTTTTTCAGCCCCATCATGCCAATGAACAGACCGATACCGCTGGTAATACCCACACGCAGACTCACCGGAATGTTGGCTATCATCCAGTAGCGAACGCGGAAAATCGTCAGTAACAGCAGACCTATCGCGCCCCAGAAGATTGCGCCCATCCCGACCTGCCACGGCAAGCCCATCGCCTGTACAACGACAAAAGCGAAGAACGCATTCAGGCCCATAGCGGGTGCCAGTGC  >  NC_000913/3896079‑3896351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A