Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F48 I1 R1
|
66 |
101.5 |
3442112 |
98.9% |
3404248 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,107,457 |
T→A |
intergenic (+86/‑95) |
fieF → / → pfkA |
Zn(2(+))/Fe(2(+))/Cd(2(+)) exporter/6‑phosphofructokinase I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,107,457 | 0 | T | A | 100.0%
| 463.5
/ NA
| 128 | intergenic (+86/‑95) | fieF/pfkA | Zn(2(+))/Fe(2(+))/Cd(2(+)) exporter/6‑phosphofructokinase I |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (70/58); total (70/58) |
Only 100 of 128 total aligned reads displayed.
GACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGATG > NC_000913/4107321‑4107591
|
gACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGtt > 1:701239/1‑140 (MQ=255)
gACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCT‑AATCAATTCAGCAGGAAGTGATAGTta > 2:221509/1‑140 (MQ=255)
ccccTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTtat < 1:165134/140‑1 (MQ=255)
tcgtACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGcac > 2:1001869/1‑140 (MQ=255)
tcgtACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGcac > 2:1138050/1‑140 (MQ=255)
tcgtACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGcac > 2:1414300/1‑140 (MQ=255)
cccAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCg < 1:222470/140‑1 (MQ=255)
cccAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCg > 2:28443/1‑140 (MQ=255)
ccAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGt < 1:230773/140‑1 (MQ=255)
ggagggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGa < 1:1314408/140‑1 (MQ=255)
ggagggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGa > 2:294619/1‑140 (MQ=255)
ggagggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGa > 2:771652/1‑140 (MQ=255)
ggagggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGa > 1:362407/1‑140 (MQ=255)
gggTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCa > 2:615830/1‑140 (MQ=255)
tAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACtt > 2:571208/1‑140 (MQ=255)
aaaCGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTc < 2:294040/140‑1 (MQ=255)
aaCGGTCTATGATTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCg < 2:701239/140‑1 (MQ=255)
aCGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGa < 1:28443/140‑1 (MQ=255)
ggTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGAtg < 2:1214059/140‑1 (MQ=255)
gTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGAtgt < 1:1124856/140‑1 (MQ=255)
cTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGc > 1:1564348/1‑140 (MQ=255)
cTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGc > 2:825950/1‑140 (MQ=255)
cTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGc > 1:629553/1‑140 (MQ=255)
tATGCTTTGATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCa > 1:430426/1‑140 (MQ=255)
ttCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAagaaga < 1:1438762/140‑1 (MQ=255)
ttCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAagaaga < 1:294619/140‑1 (MQ=255)
cATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACt > 1:150420/1‑140 (MQ=255)
cATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACt > 2:1495338/1‑140 (MQ=255)
aTCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCg > 1:243028/1‑140 (MQ=255)
tCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAagaaga < 1:242308/133‑1 (MQ=255)
tCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAagaaga > 2:242308/1‑133 (MQ=255)
tCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCgg < 1:486393/140‑1 (MQ=255)
aGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGTCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCa < 1:447264/140‑1 (MQ=255)
gTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCaa < 2:815436/140‑1 (MQ=255)
tataAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAAc > 1:1166352/1‑140 (MQ=255)
tataAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAAc > 2:1296378/1‑140 (MQ=255)
tataAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAAc > 2:145080/1‑140 (MQ=255)
tataAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAAc > 2:721148/1‑140 (MQ=255)
agagCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCa > 2:1032916/1‑140 (MQ=255)
agagCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCa < 2:430426/140‑1 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:495780/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt < 1:1001869/140‑1 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:92663/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:392458/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:233742/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:335910/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:212338/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:375381/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:1557427/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:340409/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 2:1496379/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:1632880/1‑140 (MQ=255)
agCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtt > 1:285480/1‑140 (MQ=255)
ccAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCAtttt < 2:1632880/140‑1 (MQ=255)
cAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTg < 1:495780/140‑1 (MQ=255)
cAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTg < 1:571208/140‑1 (MQ=255)
gACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCa < 1:145080/140‑1 (MQ=255)
gACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCa < 1:1093887/140‑1 (MQ=255)
gACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCa > 2:1019380/1‑140 (MQ=255)
gACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCa < 1:335910/140‑1 (MQ=255)
aCCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCAt > 2:426067/1‑140 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 2:271637/140‑1 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 1:1382728/140‑1 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 2:150420/140‑1 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 1:233742/140‑1 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 1:615830/140‑1 (MQ=255)
gCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCa < 1:1032916/140‑1 (MQ=255)
cATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCaa > 2:1608996/1‑140 (MQ=255)
aaTTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCaa < 2:1436000/139‑1 (MQ=255)
ttGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGtt < 1:1138050/140‑1 (MQ=255)
ttGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGtt < 2:212338/140‑1 (MQ=255)
tgtATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCag < 1:130799/140‑1 (MQ=255)
tgtATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCag < 1:426067/140‑1 (MQ=255)
tgtATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCag > 1:1401729/1‑140 (MQ=255)
gtATAAAATACCGCCATTTGGCCTGACCT‑AATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCagag < 1:221509/140‑1 (MQ=255)
aaTACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATGCTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGt < 1:136805/140‑1 (MQ=255)
aTACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTc < 1:1608996/140‑1 (MQ=255)
aCCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCAt > 1:1452883/1‑140 (MQ=255)
cGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGa > 2:340787/1‑140 (MQ=255)
aTTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTaa < 1:1580083/140‑1 (MQ=255)
ttGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGa > 1:1303288/1‑140 (MQ=255)
tGGCCTGACCTGAATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGaa < 1:1414300/140‑1 (MQ=255)
tgacctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCg < 2:1345003/140‑1 (MQ=255)
tgacctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCg < 1:771652/140‑1 (MQ=255)
gacctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCgg > 2:1147392/1‑140 (MQ=255)
gacctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCgg > 2:1051683/1‑140 (MQ=255)
acctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGgt > 2:701847/1‑140 (MQ=255)
cctgaATCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGgtg < 1:1019380/140‑1 (MQ=255)
aaTCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGtt > 2:431750/1‑140 (MQ=255)
aaTCAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGtt > 1:81018/1‑140 (MQ=255)
cAATTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGAc < 1:247656/140‑1 (MQ=255)
aTTCAGCAGGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACaa > 2:1231208/1‑140 (MQ=255)
gcagGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAgcggc > 1:524204/1‑140 (MQ=255)
cagGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAgcggcg > 1:895512/1‑140 (MQ=255)
cagGAAGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAgcggcg > 1:1159517/1‑140 (MQ=255)
aaGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGa < 2:340409/140‑1 (MQ=255)
aGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGAt > 2:1580833/1‑140 (MQ=255)
aGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGAt > 1:1540649/1‑140 (MQ=255)
aGTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGAt > 2:905233/1‑140 (MQ=255)
gTGATAGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGATg < 2:1159517/140‑1 (MQ=255)
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GACCCCTGTTCCGTCGTACCCAGGGAGGGTAAACGGTCTATGCTTTCATAATCAGTATAAAAGAGAGCCAGACCCGCATTTTGTGTATAAAATACCGCCATTTGGCCTGACCTGAATCAATTCAGCAGGAAGTGATTGTTATACTATTTGCACATTCGTTGGATCACTTCGATGTGCAAGAAGACTTCCGGCAACAGATTTCATTTTGCATTCCAAAGTTCAGAGGTAGTCATGATTAAGAAAATCGGTGTGTTGACAAGCGGCGGTGATG > NC_000913/4107321‑4107591
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
