Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A19 F48 I1 R1	83	81.6	2760494	99.1%	2735649	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,145,797	A→G	G155G (GGT→GGC)	hybO ←	hydrogenase 2 small subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,145,797	0	A	G	100.0%	269.5 / NA	71	G155G (GGT→GGC)	hybO	hydrogenase 2 small subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (33/38); total (33/38)

GCGAGGAAGTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTAACACATACTGC  >  NC_000913/3145663‑3145929

gcgAGGAAGTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGAt                                                                                                                                 >  2:589835/1‑140 (MQ=255)

gcgAGGAAGTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGAt                                                                                                                                 >  2:477498/1‑140 (MQ=255)

gcgAGGAAGTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGAt                                                                                                                                 >  2:161590/1‑140 (MQ=255)

        gTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATaa                                                                                                                         >  1:333483/1‑140 (MQ=255)

            tgCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGgc                                                                                                                     >  1:520343/1‑140 (MQ=255)

                ggTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGgctgct                                                                                                                 >  2:517911/1‑140 (MQ=255)

                ggTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGgctgct                                                                                                                 >  1:1341487/1‑140 (MQ=255)

                ggTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGgctgct                                                                                                                 >  2:1146533/1‑140 (MQ=255)

                ggTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGgctgct                                                                                                                 >  1:676449/1‑140 (MQ=255)

                   tCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTgcg                                                                                                              >  2:530429/1‑140 (MQ=255)

                             gCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTccgccg                                                                                                    <  2:1189298/140‑1 (MQ=255)

                                  gAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTg                                                                                               <  1:1146533/140‑1 (MQ=255)

                                  gAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTg                                                                                               <  1:161590/140‑1 (MQ=255)

                                   aaTATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACTCCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGc                                                                                              <  2:945110/140‑1 (MQ=255)

                                     tatTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCgg                                                                                            <  2:484841/140‑1 (MQ=255)

                                     tatTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCgg                                                                                            <  2:676449/140‑1 (MQ=255)

                                     tatTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCgg                                                                                            <  1:74620/140‑1 (MQ=255)

                                       ttGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGAt                                                                                          <  2:1341487/140‑1 (MQ=255)

                                        tGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGAtg                                                                                         <  2:1062239/140‑1 (MQ=255)

                                          aTAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGAtgtg                                                                                       >  2:1184982/1‑140 (MQ=255)

                                           tAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGa                                                                                      >  1:477374/1‑140 (MQ=255)

                                            aaCGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGCTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGAt                                                                                     >  2:1060438/1‑140 (MQ=255)

                                             aCGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATc                                                                                    >  1:581994/1‑140 (MQ=255)

                                             aCGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATc                                                                                    >  1:729399/1‑140 (MQ=255)

                                             aCGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATc                                                                                    >  2:1325657/1‑140 (MQ=255)

                                               ggTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCca                                                                                  >  2:1028975/1‑140 (MQ=255)

                                                 ttttGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCcaca                                                                                <  1:1359284/140‑1 (MQ=255)

                                                 ttttGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCcaca                                                                                >  2:1049518/1‑140 (MQ=255)

                                                    tGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATc                                                                             >  1:937529/1‑140 (MQ=255)

                                                      ccTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGAtg                                                                                         >  2:1197551/1‑126 (MQ=255)

                                                      ccTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGAtg                                                                                         <  1:1197551/126‑1 (MQ=255)

                                                       cTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGc                                                                          <  1:916592/140‑1 (MQ=255)

                                                           cAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCAc                                                                      >  2:1332741/1‑140 (MQ=255)

                                                              aaCTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCgg                                                                   <  1:938851/140‑1 (MQ=255)

                                                                 ttcttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCaa                                                                <  2:477374/140‑1 (MQ=255)

                                                                 ttcttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCaa                                                                <  1:551796/140‑1 (MQ=255)

                                                                   cttGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAAcc                                                              <  2:263866/140‑1 (MQ=255)

                                                                     tGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGACTCACCGGCAACCAt                                                            <  1:589835/140‑1 (MQ=255)

                                                                      gCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATg                                                           <  2:515491/140‑1 (MQ=255)

                                                                        aGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCa                                                         <  2:581994/140‑1 (MQ=255)

                                                                        aGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCa                                                         >  1:800706/1‑140 (MQ=255)

                                                                        aGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCa                                                         <  1:530429/140‑1 (MQ=255)

                                                                           cTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCaata                                                      >  1:948156/1‑140 (MQ=255)

                                                                             gACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCaataaa                                                    <  1:1325657/140‑1 (MQ=255)

                                                                              aCTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGTGGATGTGATCCACAATCGGCTCACCGGCAACCATGCaataaat                                                   >  2:721030/1‑140 (MQ=255)

                                                                              aCTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCAt                                                            >  1:1345947/1‑131 (MQ=255)

                                                                              aCTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCAt                                                            <  2:1345947/131‑1 (MQ=255)

                                                                              aCTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCaataaat                                                   >  2:306187/1‑140 (MQ=255)

                                                                                  cgcCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCg                                               <  1:30259/140‑1 (MQ=255)

                                                                                    ccAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGtt                                             <  2:520343/140‑1 (MQ=255)

                                                                                    ccAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGtt                                             >  2:250345/1‑140 (MQ=255)

                                                                                    ccAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGtt                                             <  2:1163202/140‑1 (MQ=255)

                                                                                        ttGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCt                                         <  2:948156/140‑1 (MQ=255)

                                                                                             ttAACTCCGGCTGCGGCAACACCGCCCCCCGCAGAGCAGGAGCCGATAGCGATAATCGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  2:1035256/140‑1 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    >  2:473447/1‑140 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  2:937529/140‑1 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  2:790625/140‑1 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  1:1304717/140‑1 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  1:1332741/140‑1 (MQ=255)

                                                                                             ttAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTaa                                    <  2:3654/140‑1 (MQ=255)

                                                                                              tAACTCCAGCTGCGGCAGCACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAAt                                   <  2:249620/140‑1 (MQ=255)

                                                                                                  tCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCTATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGa                               <  2:1134162/140‑1 (MQ=255)

                                                                                                     aGCTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATgg                            <  2:800706/140‑1 (MQ=255)

                                                                                                       cTGCGGCAACACCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGaa                          <  1:753648/140‑1 (MQ=255)

                                                                                                               acacCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATccac                  >  2:1172244/1‑140 (MQ=255)

                                                                                                               acacCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATccac                  <  1:250345/140‑1 (MQ=255)

                                                                                                                 acCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATccacca                <  2:729399/140‑1 (MQ=255)

                                                                                                                 acCGCCCCACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATccacca                <  2:422943/140‑1 (MQ=255)

                                                                                                                     ccccACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTaa            >  1:631329/1‑140 (MQ=255)

                                                                                                                       ccACGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTAaca          >  1:222325/1‑140 (MQ=255)

                                                                                                                          cGCAGAGCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTAACACAt       >  1:1110458/1‑140 (MQ=255)

                                                                                                                               agCAGGAGCCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTAACACATACTGc  >  2:179659/1‑140 (MQ=255)

GCGAGGAAGTTGTGCGGGTTCGGCGGGCAGCCCGGAATATTGATAACGGTTTTGCCTGGCAGAACTTCTTGCAGGCTGACTGCGCCAGTTGGGTTAACTCCAGCTGCGGCAACACCGCCCCACGCAGAGCAGGAACCGATAGCGATAATGGCTGCTGCGCCTTCCGCCGCTTTGCGGATGTGATCCACAATCGGCTCACCGGCAACCATGCAATAAATACCGTTATCTTTTAATGGGATGGAACCATCCACCACTAACACATACTGC  >  NC_000913/3145663‑3145929

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A