Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A19 F48 I1 R1	83	81.6	2760494	99.1%	2735649	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,356,555	C→A	L611M (CTG→ATG)	gltB →	glutamate synthase subunit GltB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,356,555	0	C	A	100.0%	265.5 / NA	76	L611M (CTG→ATG)	gltB	glutamate synthase subunit GltB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (42/34); total (42/34)

GATGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGAAACCGCCAGC  >  NC_000913/3356425‑3356689

gaTGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGctct                                                                                                                               <  2:493912/140‑1 (MQ=255)

gaTGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGctct                                                                                                                               <  2:361236/140‑1 (MQ=255)

gaTGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGctct                                                                                                                               <  1:494214/140‑1 (MQ=255)

  tGATAGAGGAGGACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTcc                                                                                                                             >  2:961059/1‑140 (MQ=255)

  tGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTcc                                                                                                                             >  2:269129/1‑140 (MQ=255)

  tGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTcc                                                                                                                             >  2:1328862/1‑140 (MQ=255)

  tGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTcc                                                                                                                             <  2:1025995/140‑1 (MQ=255)

       gaggagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCg                                                                                                                        >  2:185165/1‑140 (MQ=255)

          gagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGaa                                                                                                                     >  2:983583/1‑140 (MQ=255)

          gagCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGaa                                                                                                                     <  1:229983/140‑1 (MQ=255)

           agCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAat                                                                                                                    >  1:123542/1‑140 (MQ=255)

           agCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAat                                                                                                                    >  1:486906/1‑140 (MQ=255)

            gCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAata                                                                                                                   >  1:641109/1‑140 (MQ=255)

            gCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAata                                                                                                                   <  1:415572/140‑1 (MQ=255)

                tACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGc                                                                                                               <  1:746261/140‑1 (MQ=255)

                tACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGc                                                                                                               >  2:966327/1‑140 (MQ=255)

                tACCGCGCAGATACGCTGGATATCACCTTTGACGACACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTATCCGACCGGAATATCGc                                                                                                               <  1:153372/140‑1 (MQ=255)

                  ccGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTa                                                                                                             >  2:424011/1‑140 (MQ=255)

                  ccGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTa                                                                                                             >  1:550904/1‑140 (MQ=255)

                    gcgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTaaa                                                                                                           >  1:195942/1‑140 (MQ=255)

                     cgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAg                                                                                                          >  1:1056193/1‑140 (MQ=255)

                     cgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAg                                                                                                          >  1:1212453/1‑140 (MQ=255)

                     cgcAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAg                                                                                                          >  1:1017426/1‑140 (MQ=255)

                       cAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGAt                                                                                                        >  1:339925/1‑140 (MQ=255)

                       cAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGAt                                                                                                        >  1:340054/1‑140 (MQ=255)

                          aTACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGc                                                                                                     >  2:553934/1‑140 (MQ=255)

                          aTACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGCGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGc                                                                                                     >  2:1317368/1‑140 (MQ=255)

                          aTACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCGGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGc                                                                                                     >  1:837418/1‑140 (MQ=255)

                              gCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGc                                                                                                 <  1:966327/140‑1 (MQ=255)

                                    tatCACCTTTGATGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTc                                                                                           >  1:463645/1‑140 (MQ=255)

                                      tCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCa                                                                                         >  2:35264/1‑140 (MQ=255)

                                          cTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGccc                                                                                     >  1:811137/1‑140 (MQ=255)

                                            ttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCg                                                                                   >  2:367974/1‑140 (MQ=255)

                                            ttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCg                                                                                   >  1:79621/1‑140 (MQ=255)

                                            ttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCg                                                                                   >  2:640159/1‑140 (MQ=255)

                                            ttGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCg                                                                                   >  1:755308/1‑140 (MQ=255)

                                             tGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGa                                                                                  >  1:293745/1‑140 (MQ=255)

                                              gACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGAt                                                                                 >  2:66159/1‑140 (MQ=255)

                                                    aCTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGt                                                                           >  1:431886/1‑140 (MQ=255)

                                                    aCTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGt                                                                           >  1:21612/1‑140 (MQ=255)

                                                    aCTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGt                                                                           >  1:91429/1‑140 (MQ=255)

                                                      tAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTg                                                                         >  1:201525/1‑140 (MQ=255)

                                                       aaaaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTgg                                                                        <  2:431886/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:66159/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:1328862/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:367974/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  2:486906/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:119593/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:961059/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:47070/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:35264/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  1:269129/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTCCCAGCCCCGATGGCGGTTGgcg                                                                      <  2:641109/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCCCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  2:123542/140‑1 (MQ=255)

                                                         aaCCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGAAGCGGCACCGTGCTGATGGTGCTATCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGgcg                                                                      <  2:201525/140‑1 (MQ=255)

                                                              cGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATc                                                                 <  1:469887/140‑1 (MQ=255)

                                                                   gAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGAc                                                            <  2:550904/140‑1 (MQ=255)

                                                                       cGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGt                                                        <  1:688881/140‑1 (MQ=255)

                                                                           aGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTgg                                                    >  1:762474/1‑140 (MQ=255)

                                                                            gTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGt                                                   <  1:983583/140‑1 (MQ=255)

                                                                            gTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGt                                                   <  2:575113/140‑1 (MQ=255)

                                                                            gTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGt                                                   <  2:338218/140‑1 (MQ=255)

                                                                                aaGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGAt                                               <  1:587650/140‑1 (MQ=255)

                                                                                     cTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAg                                          >  1:461250/1‑140 (MQ=255)

                                                                                      tgtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGc                                         <  1:1207771/140‑1 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  1:1302795/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  2:4568/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  2:1209293/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  1:634170/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  1:611566/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  1:556561/1‑140 (MQ=255)

                                                                                       gtgCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGcc                                        >  1:1115136/1‑140 (MQ=255)

                                                                                                  ccGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGAt                             <  2:1017426/140‑1 (MQ=255)

                                                                                                  ccGAAAAAATGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGAt                             >  1:824006/1‑140 (MQ=255)

                                                                                                     aaaaaaTGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGTGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGcc                          <  2:237503/140‑1 (MQ=255)

                                                                                                     aaaaaaTGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGcc                          <  1:4568/140‑1 (MQ=255)

                                                                                                         aaTGGTACGTAGCGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAAca                      <  1:185165/140‑1 (MQ=255)

                                                                                                                     cGGCACCGTGCTGATGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGaaa          <  2:556561/140‑1 (MQ=255)

                                                                                                                             tgctgaTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGAAACCGCCAgc  >  1:438703/1‑140 (MQ=255)

GATGAAAGAGGAGCACTACCGCGCAGATACGCTGGATATCACCTTTGACGTCACTAAAACCACGCTCGAAGCGACAGTCAAAGAGCTGTGCGACAAAGCCGAAAAAATGGTACGTAGCGGCACCGTGCTGCTGGTGCTCTCCGACCGGAATATCGCTAAAGATCGCCTGCCGGTTCCAGCCCCGATGGCGGTTGGCGCGATCCAGACCCGTCTGGTCGATCAAAGCCTGCGTTGCGATGCCAACATCATCGTCGAAACCGCCAGC  >  NC_000913/3356425‑3356689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A