Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A19 F48 I1 R1 83 81.6 2760494 99.1% 2735649 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,399,168 C→A G271W (GGG→TGG)  mreC ← cell shape determining protein MreC

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,399,1680CA96.5% 191.2 / 0.1 58G271W (GGG→TGG) mreCcell shape determining protein MreC
Reads supporting (aligned to +/- strand):  ref base C (0/2);  new base A (25/31);  total (25/33)
Fisher's exact test for biased strand distribution p-value = 5.01e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01

GTTGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCC  >  NC_000913/3399032‑3399303
                                                                                                                                        |                                                                                                                                       
gTTGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCccacca                                                                                                                                      >  2:1234431/1‑140 (MQ=255)
gTTGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCccacca                                                                                                                                      >  2:135550/1‑140 (MQ=255)
 ttGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCcaccac                                                                                                                                     <  1:998617/140‑1 (MQ=255)
  tGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACcaca                                                                                                                                    >  2:421453/1‑140 (MQ=255)
      ggTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCAcagcag                                                                                                                                <  2:927880/140‑1 (MQ=255)
         tCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCAcagcagcag                                                                                                                             <  2:745789/140‑1 (MQ=255)
            ggTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCAcagcagcagcag                                                                                                                          >  2:960231/1‑140 (MQ=255)
                  tttGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACg                                                                                                                    >  1:303031/1‑140 (MQ=255)
                     ggCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCaa                                                                                                                 >  1:1254896/1‑140 (MQ=255)
                     ggCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCaa                                                                                                                 >  2:186126/1‑140 (MQ=255)
                           aTCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTg                                                                                                           <  1:196423/140‑1 (MQ=255)
                                gTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGcc                                                                                                      <  2:1209445/140‑1 (MQ=255)
                                  cTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCt                                                                                                    <  1:154971/140‑1 (MQ=255)
                                     gCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCa                                                                                                 >  1:165579/1‑140 (MQ=255)
                                      cGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAg                                                                                                <  2:303031/140‑1 (MQ=255)
                                       gAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCACACGTTGCAGCCCTGCAGt                                                                                               <  1:898770/140‑1 (MQ=255)
                                           gCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGa                                                                                           <  2:1279146/140‑1 (MQ=255)
                                               tACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGAcgcg                                                                                       >  2:287556/1‑140 (MQ=255)
                                                     cGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGaa                                                                                 >  2:578142/1‑140 (MQ=255)
                                                     cGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGCCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGaa                                                                                 >  1:1133446/1‑140 (MQ=255)
                                                      ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAAt                                                                                <  2:670803/140‑1 (MQ=255)
                                                      ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAAt                                                                                <  2:910281/140‑1 (MQ=255)
                                                      ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAAt                                                                                <  1:883397/140‑1 (MQ=255)
                                                      ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAAt                                                                                <  2:201020/140‑1 (MQ=255)
                                                      ggCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAAt                                                                                <  2:819969/140‑1 (MQ=255)
                                                        catcatCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATca                                                                              <  1:421453/140‑1 (MQ=255)
                                                        catcatCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATca                                                                              <  2:1254896/140‑1 (MQ=255)
                                                        catcatCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATca                                                                              <  2:1198348/140‑1 (MQ=255)
                                                        aatcatcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATca                                                                              <  2:78532/139‑1 (MQ=255)
                                                         atcatcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcac                                                                             >  1:267921/1‑140 (MQ=255)
                                                          tcatcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATcaca                                                                            >  1:956737/1‑140 (MQ=255)
                                                           catcTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAg                                                                           >  1:1299480/1‑140 (MQ=255)
                                                                gCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATaa                                                                      <  1:483981/140‑1 (MQ=255)
                                                                      gACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAgcgcgc                                                                <  2:441785/140‑1 (MQ=255)
                                                                       aCGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCt                                                               <  1:259120/140‑1 (MQ=255)
                                                                       aCGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCt                                                               >  1:119307/1‑140 (MQ=255)
                                                                           tCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGt                                                           >  2:875114/1‑140 (MQ=255)
                                                                            cATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTa                                                          <  2:1263897/140‑1 (MQ=255)
                                                                            cATTAGCAACACGATGCACCTCTTCCGGAGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTa                                                          <  2:1299480/140‑1 (MQ=255)
                                                                                 gCAACCCGATGCACCACTTCCGGCATCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAACAGCATCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGAGCATGAATCACAGTATAAGCGCGCTGGGTATCGAg                                                     <  2:1133446/140‑1 (MQ=255)
                                                                                 gCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAg                                                     <  1:87576/140‑1 (MQ=255)
                                                                                   aaCACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGtt                                                   >  1:577387/1‑140 (MQ=255)
                                                                                    acacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGttt                                                  >  1:1176792/1‑140 (MQ=255)
                                                                                     cacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGtttt                                                 <  1:135550/140‑1 (MQ=255)
                                                                                     aacGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGtttt                                                 <  2:572166/139‑1 (MQ=255)
                                                                                        gATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACg                                              >  2:445314/1‑140 (MQ=255)
                                                                                          tGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGa                                            >  2:1062494/1‑140 (MQ=255)
                                                                                          tGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGa                                            <  2:1138362/140‑1 (MQ=255)
                                                                                                    ccGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAAcc                                  >  2:427167/1‑140 (MQ=255)
                                                                                                       gCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACcgcg                               <  1:1234431/140‑1 (MQ=255)
                                                                                                       gCGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACcgcg                               <  1:1032438/140‑1 (MQ=255)
                                                                                                        cGTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGa                              <  1:875114/140‑1 (MQ=255)
                                                                                                         gTCATCGGGTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGAc                             >  1:1365407/1‑140 (MQ=255)
                                                                                                                 gTTAGCGCCGTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGc                     >  1:894761/1‑140 (MQ=255)
                                                                                                                          gTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGa            <  2:577387/140‑1 (MQ=255)
                                                                                                                          gTTACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGa            >  1:242934/1‑140 (MQ=255)
                                                                                                                           ttACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGaa           >  1:341749/1‑140 (MQ=255)
                                                                                                                           ttACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGaa           >  2:881230/1‑140 (MQ=255)
                                                                                                                           ttACGATCTGCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGaa           >  1:1169680/1‑140 (MQ=255)
                                                                                                                                    gCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGcc  <  2:432126/140‑1 (MQ=255)
                                                                                                                                    gCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGcc  <  1:725471/140‑1 (MQ=255)
                                                                                                                                    gCCCACCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGcc  <  1:578142/140‑1 (MQ=255)
                                                                                                                                        |                                                                                                                                       
GTTGCCGGTTCAGGTAACTTTGGCCCCATCGCGTCTGGCGAAGGCAATACCTGCGGCATCATCTGCATCAGACGTTCATTAGCAACACGATGCACCTCTTCCGGCGTCATCGGGTTAGCGCCGTTACGATCTGCCCCCCACAGCAGCAGCAGATAACGCAAACGTTGCAGCCCTGCAGTCGGACGCGCCTGAATCACAGTATAAGCGCGCTGGGTATCGAGTTTTACGGAAGAGACAACCGCGACCGGATAGCCTTCCGGGAAACGACCGCC  >  NC_000913/3399032‑3399303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A