Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A19 F48 I1 R1	83	81.6	2760494	99.1%	2735649	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,022,591	G→T	G125V (GGC→GTC)	tatB →	twin arginine protein translocation system ‑ TatB protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,022,591	0	G	T	100.0%	256.6 / NA	73	G125V (GGC→GTC)	tatB	twin arginine protein translocation system ‑ TatB protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (47/26); total (47/26)

TCGATGGATGAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGGCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATA  >  NC_000913/4022458‑4022725

tCGATGGATGAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAAACCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAAc                                                                                                                                  >  2:194705/1‑140 (MQ=255)

    tggatgAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCt                                                                                                                              >  2:327718/1‑140 (MQ=255)

       atgAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGcc                                                                                                                           <  1:211434/140‑1 (MQ=255)

        tgAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAAACCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCg                                                                                                                          <  1:194705/140‑1 (MQ=255)

         gAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACGCCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGc                                                                                                                         <  1:810298/140‑1 (MQ=255)

         gAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGc                                                                                                                         <  1:1186639/140‑1 (MQ=255)

              aCGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACCCCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGcac                                                                                                                    <  2:882011/140‑1 (MQ=255)

              aCGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGcac                                                                                                                    >  2:448492/1‑140 (MQ=255)

               cGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGcaca                                                                                                                   >  2:372894/1‑140 (MQ=255)

                 ccAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACaaa                                                                                                                 >  2:601933/1‑140 (MQ=255)

                   aGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACg                                                                                                               <  2:525944/140‑1 (MQ=255)

                    ggCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGc                                                                                                              >  2:135193/1‑140 (MQ=255)

                    ggCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGc                                                                                                              >  2:679419/1‑140 (MQ=255)

                     gCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGc                                                                                                                         <  1:1363833/128‑1 (MQ=255)

                     gCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGc                                                                                                                         >  2:1363833/1‑128 (MQ=255)

                     gCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCa                                                                                                             >  1:496875/1‑140 (MQ=255)

                     gCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCa                                                                                                             >  1:1233280/1‑140 (MQ=255)

                     gCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCa                                                                                                             >  2:1109164/1‑140 (MQ=255)

                         cgGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGcc                                                                                                         >  2:1350931/1‑140 (MQ=255)

                         cgGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGcc                                                                                                         >  1:705496/1‑140 (MQ=255)

                           gAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAg                                                                                                       <  2:1337378/140‑1 (MQ=255)

                           gAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAg                                                                                                       <  2:428331/140‑1 (MQ=255)

                                gATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGc                                                                                                  <  1:843420/140‑1 (MQ=255)

                                 aTGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGcc                                                                                                 <  1:327718/140‑1 (MQ=255)

                                        gTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAg                                                                                          >  2:723979/1‑140 (MQ=255)

                                                    cAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAAcc                                                                              >  1:1120718/1‑140 (MQ=255)

                                                    cAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAAcc                                                                              >  2:42037/1‑140 (MQ=255)

                                                     aaaCGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCa                                                                             <  1:723979/140‑1 (MQ=255)

                                                      aaCGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCAc                                                                            >  2:45918/1‑140 (MQ=255)

                                                          aTCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCa                                                                        >  1:85096/1‑140 (MQ=255)

                                                           tCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCag                                                                       >  1:888935/1‑140 (MQ=255)

                                                            ccTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCaga                                                                      >  2:1318609/1‑140 (MQ=255)

                                                            ccTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCaga                                                                      >  1:277005/1‑140 (MQ=255)

                                                              agAAAAGGCGAGCGATGAAGCGGAAACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCGAGTTAGCCGGAACAGAAGCCAGAAACCACGCCAGAGc                                                                    <  2:42997/139‑1 (MQ=255)

                                                                 aaaGGCGAGAGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCgg                                                                 >  2:887118/1‑140 (MQ=255)

                                                                     gcgagcgaTGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCggtggt                                                             >  1:1331056/1‑140 (MQ=255)

                                                                     gcgagcgaTGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCggtggt                                                             >  2:664900/1‑140 (MQ=255)

                                                                     gcgagcgaTGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCggtggt                                                             >  1:842001/1‑140 (MQ=255)

                                                                     gcgagcgaTGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCggtggt                                                             >  2:20622/1‑140 (MQ=255)

                                                                               aaGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACctgct                                                   >  1:1069933/1‑140 (MQ=255)

                                                                                    cacaCCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGa                                              >  1:63223/1‑140 (MQ=255)

                                                                                       acCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGc                                           >  1:385299/1‑140 (MQ=255)

                                                                                         catccatAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTg                                         <  1:783427/140‑1 (MQ=255)

                                                                                           tccatAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGaa                                       >  1:319090/1‑140 (MQ=255)

                                                                                                aaCCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGaa                                  <  2:667918/140‑1 (MQ=255)

                                                                                                 aCCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGaaa                                 >  1:224920/1‑140 (MQ=255)

                                                                                                 aCCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGaa                                  >  1:560090/1‑139 (MQ=255)

                                                                                                 aCCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGaa                                  <  2:560090/139‑1 (MQ=255)

                                                                                                     ggtggtGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCATAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCg                             >  1:356903/1‑140 (MQ=255)

                                                                                                     ggtggtGAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCg                             <  1:42037/140‑1 (MQ=255)

                                                                                                      gtggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGGGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGc                            >  2:557341/1‑140 (MQ=255)

                                                                                                      gtggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGc                            >  2:804069/1‑140 (MQ=255)

                                                                                                      gtggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGc                            >  2:382299/1‑140 (MQ=255)

                                                                                                      gtggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGATGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGc                            >  1:628277/1‑140 (MQ=255)

                                                                                                       tggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCt                           <  1:645492/140‑1 (MQ=255)

                                                                                                       tggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCt                           >  2:1079437/1‑140 (MQ=255)

                                                                                                       tggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCt                           >  1:390779/1‑140 (MQ=255)

                                                                                                       tggtgAAAGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCt                           >  2:764192/1‑140 (MQ=255)

                                                                                                        ggtgAAAGATAATGAAGCTGCGCATGAGGACGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTg                          <  2:1331056/140‑1 (MQ=255)

                                                                                                            aaaGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCAcc                      >  2:802583/1‑140 (MQ=255)

                                                                                                             aaGATAATGAAGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCt                     <  1:601933/140‑1 (MQ=255)

                                                                                                                      aaGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtct            >  2:535237/1‑139 (MQ=255)

                                                                                                                      aaGCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtcg            >  1:718900/1‑140 (MQ=255)

                                                                                                                        gCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtcgtc          <  2:1069933/140‑1 (MQ=255)

                                                                                                                        gCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtcgtc          <  1:876236/140‑1 (MQ=255)

                                                                                                                        gCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtcgtc          >  2:1311276/1‑140 (MQ=255)

                                                                                                                        gCTGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTtcgtc          <  1:711549/140‑1 (MQ=255)

                                                                                                                          tGCGCATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGa        <  2:224920/140‑1 (MQ=255)

                                                                                                                           gcgcATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAg       >  2:1337244/1‑140 (MQ=255)

                                                                                                                            cgcATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGt      >  2:69076/1‑140 (MQ=255)

                                                                                                                             gcATGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTg     >  1:595624/1‑140 (MQ=255)

                                                                                                                               aTGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGAt   <  2:1049334/140‑1 (MQ=255)

                                                                                                                               aTGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCAAGTGAt   <  1:1311276/140‑1 (MQ=255)

                                                                                                                                tGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATa  >  2:1165516/1‑140 (MQ=255)

                                                                                                                                tGAGGTCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATa  <  2:718900/140‑1 (MQ=255)

TCGATGGATGAACTACGCCAGGCCGCGGAGTCGATGAAGCGTTCCTACGTTGCAAACGATCCTGAAAAGGCGAGCGATGAAGCGCACACCATCCATAACCCGGTGGTGAAAGATAATGAAGCTGCGCATGAGGGCGTAACGCCTGCCGCTGCACAAACGCAGGCCAGTTCGCCGGAACAGAAGCCAGAAACCACGCCAGAGCCGGTGGTAAAACCTGCTGCGGACGCTGAACCGAAAACCGCTGCACCTTCCCCTTCGTCGAGTGATA  >  NC_000913/4022458‑4022725

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A