Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F48 I1 R1 55 131.7 4456318 99.2% 4420667 139.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,319,756 G→T A303E (GCG→GAG)  phnI ← carbon‑phosphorus lyase core complex subunit PhnI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,319,7560GT100.0% 244.8 / NA 70A303E (GCG→GAG) phnIcarbon‑phosphorus lyase core complex subunit PhnI
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (41/29);  total (41/29)

GTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCGCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATAAAA  >  NC_000913/4319619‑4319890
                                                                                                                                         |                                                                                                                                      
gTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTctcg                                                                                                                                      >  1:1164930/1‑140 (MQ=255)
gTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTctcg                                                                                                                                      >  2:1214085/1‑140 (MQ=255)
   gCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGc                                                                                                                                   <  1:568458/140‑1 (MQ=255)
    cAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  <  1:400707/140‑1 (MQ=255)
    cAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  <  1:46626/140‑1 (MQ=255)
    cAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  <  2:1164930/140‑1 (MQ=255)
    cAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  <  2:1805598/140‑1 (MQ=255)
      gACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCg                                                                                                                                <  2:875969/140‑1 (MQ=255)
         gTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCg                                                                                                                             <  2:1873952/140‑1 (MQ=255)
            tGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTAc                                                                                                                          >  2:1055666/1‑140 (MQ=255)
               gTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTcc                                                                                                                       <  1:275251/140‑1 (MQ=255)
               gTAGCTCCAGTTCGGCCTGGAAAGCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGAATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTcc                                                                                                                       <  2:1293641/140‑1 (MQ=255)
                   cTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCgggg                                                                                                                   >  2:125555/1‑140 (MQ=255)
                   cTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCgggg                                                                                                                   >  1:1234531/1‑140 (MQ=255)
                     ccAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  <  1:605629/123‑1 (MQ=255)
                     ccAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCt                                                                                                                                  >  2:605629/1‑123 (MQ=255)
                       aGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTg                                                                                                               <  1:633705/140‑1 (MQ=255)
                       aGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTg                                                                                                               <  1:453726/140‑1 (MQ=255)
                        gTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGc                                                                                                              >  2:1789263/1‑140 (MQ=255)
                        gTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGc                                                                                                              >  2:550361/1‑140 (MQ=255)
                         ttCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTTCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCTTGCTCGCCGTACTCCGGGGCTTGCa                                                                                                             >  2:2093504/1‑140 (MQ=255)
                            ggCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCagag                                                                                                          <  2:967711/140‑1 (MQ=255)
                             gCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAgc                                                                                                         >  2:521167/1‑140 (MQ=255)
                              ccTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAgcg                                                                                                        >  1:65086/1‑140 (MQ=255)
                                        gACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCa                                                                                              <  1:1795085/140‑1 (MQ=255)
                                             aGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGcgcc                                                                                         >  1:1861536/1‑140 (MQ=255)
                                               tGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGcgccat                                                                                       <  1:1421588/140‑1 (MQ=255)
                                                       tttGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGccatcgccatcg                                                                               >  2:1411466/1‑140 (MQ=255)
                                                         tGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCt                                                                             >  2:1833293/1‑140 (MQ=255)
                                                           aGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCttt                                                                           >  2:1978854/1‑140 (MQ=255)
                                                               gtgAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTgcgc                                                                       >  1:1682504/1‑140 (MQ=255)
                                                                tgAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGcgct                                                                      >  2:1989792/1‑140 (MQ=255)
                                                                tgAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGcgct                                                                      >  2:2184948/1‑140 (MQ=255)
                                                                 gagaCAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGcgctc                                                                     >  2:558285/1‑140 (MQ=255)
                                                                     cAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCgctcgctc                                                                 <  1:1055666/140‑1 (MQ=255)
                                                                      aaaGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCa                                                                >  2:1276119/1‑140 (MQ=255)
                                                                       aaGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCAt                                                               >  2:1318730/1‑140 (MQ=255)
                                                                        aGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATg                                                              >  1:1076863/1‑140 (MQ=255)
                                                                        aGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATg                                                              >  2:922809/1‑140 (MQ=255)
                                                                          ccTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGcc                                                            <  2:65086/140‑1 (MQ=255)
                                                                            tGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGCAATCCTGGGCTTGCAGAGCGCTGTCGACCAGCCCCATCCCCATAGCTTTCCGCTCGCTCATGCCGa                                                          >  2:800109/1‑140 (MQ=255)
                                                                             gCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGaa                                                         <  2:2107686/140‑1 (MQ=255)
                                                                             gCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGaa                                                         >  2:1538363/1‑140 (MQ=255)
                                                                              cGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAac                                                        >  2:1485593/1‑140 (MQ=255)
                                                                              cGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAac                                                        >  1:1646638/1‑140 (MQ=255)
                                                                              cGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAac                                                        >  2:309812/1‑140 (MQ=255)
                                                                                gCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAacac                                                      <  2:1076863/140‑1 (MQ=255)
                                                                                gCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAacac                                                      <  1:1318730/140‑1 (MQ=255)
                                                                                    cGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGc                                                  >  1:1607863/1‑140 (MQ=255)
                                                                                           gTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGc                                           <  1:125555/140‑1 (MQ=255)
                                                                                           gTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGc                                           <  1:521167/140‑1 (MQ=255)
                                                                                           gTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGc                                           <  1:1833293/140‑1 (MQ=255)
                                                                                           atCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGc                                           <  2:139922/139‑1 (MQ=255)
                                                                                                cATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCcgcgc                                      >  2:2222000/1‑140 (MQ=255)
                                                                                                          cACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTgcg                            >  1:261114/1‑140 (MQ=255)
                                                                                                          cACGAACTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTgcg                            >  1:1269755/1‑140 (MQ=255)
                                                                                                              aaCTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGcggcgg                        >  2:398735/1‑140 (MQ=255)
                                                                                                              aaCTCTTCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGcggcgg                        >  1:198607/1‑140 (MQ=255)
                                                                                                                   ttCATCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCATGAAGTGCGGCGGCTCAc                   >  1:1788832/1‑140 (MQ=255)
                                                                                                                       tCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCcgg               <  2:1269755/140‑1 (MQ=255)
                                                                                                                       tCCTGCGCCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCcgg               <  1:922809/140‑1 (MQ=255)
                                                                                                                           gcgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCggg           >  2:636030/1‑140 (MQ=255)
                                                                                                                           gcgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCggg           >  2:650579/1‑140 (MQ=255)
                                                                                                                           gcgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCggg           >  2:2146074/1‑140 (MQ=255)
                                                                                                                           gcgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCggg           >  1:269920/1‑140 (MQ=255)
                                                                                                                           gcgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCggg           >  1:361282/1‑140 (MQ=255)
                                                                                                                            cgcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGt          <  1:309812/140‑1 (MQ=255)
                                                                                                                             gcCGGGCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTc         >  1:835559/1‑140 (MQ=255)
                                                                                                                                 ggCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATa     >  1:1152301/1‑140 (MQ=255)
                                                                                                                                 ggCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATa     >  2:47504/1‑140 (MQ=255)
                                                                                                                                 ggCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATa     <  2:1682504/140‑1 (MQ=255)
                                                                                                                                 ggCCTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGGCGATa     >  2:1662457/1‑140 (MQ=255)
                                                                                                                                    cTGTCTCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATaaaa  <  2:1607863/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                      
GTTGCAGACGTTTGAGTAGCTCCAGTTCGGCCTGGAAATCGACGTAGTGGGGGAGTTTGAGGTGTGAGACAAAGCCTGCGGCTTCGACGTTGTCGGCATGTGCCAGCACGAACTCTTCATCCTGCGCCGGGCCTGTCGCGTGCTCGCCGTACTCCGGGGCTTGCAGAGCGCGGTCGACCAGCGCCATCGCCATCGCTTTGCGCTCGCTCATGCCGAACACCAGCCCGTAGCCGCGCGTGAAGTGCGGCGGCTCACCCGGCGGGTCGATAAAA  >  NC_000913/4319619‑4319890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A