Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A18 F48 I1 R1 70 76.3 2572620 98.7% 2539175 139.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,062,862 G→T A671A (GCG→GCT)  scpA → methylmalonyl‑CoA mutase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,062,8620GT100.0% 218.3 / NA 62A671A (GCG→GCT) scpAmethylmalonyl‑CoA mutase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base T (33/29);  total (33/29)

ATCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCGGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAAT  >  NC_000913/3062728‑3062995
                                                                                                                                      |                                                                                                                                     
aTCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCtggtgg                                                                                                                                  >  2:895726/1‑140 (MQ=255)
aTCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCtggtgg                                                                                                                                  >  1:756512/1‑140 (MQ=255)
  cgcccgccTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCg                                                                                                                                >  1:1239494/1‑140 (MQ=255)
  cgcccgccTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCg                                                                                                                                >  2:246828/1‑140 (MQ=255)
  cgcccgccTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCg                                                                                                                                >  1:114398/1‑140 (MQ=255)
     ccgccTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCa                                                                                                                             >  1:530425/1‑140 (MQ=255)
       gcttGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCAtt                                                                                                                           >  2:155549/4‑140 (MQ=255)
          tGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTccg                                                                                                                        >  2:732745/1‑140 (MQ=255)
          tGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTccg                                                                                                                        >  1:650732/1‑140 (MQ=255)
            gCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTccgcc                                                                                                                      >  1:705388/1‑140 (MQ=255)
             ccGTAGAAAACGACGTTCACGTAGTGGACGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTccgccg                                                                                                                     <  2:241769/140‑1 (MQ=255)
                 aGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAgg                                                                                                                 >  2:232958/1‑140 (MQ=255)
                          cgTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCt                                                                                                        >  1:467417/1‑140 (MQ=255)
                            ttCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTc                                                                                                      >  1:448294/1‑140 (MQ=255)
                             tCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTcc                                                                                                     <  2:1190661/140‑1 (MQ=255)
                               aCGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGGCGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTg                                                                                                   <  2:127084/140‑1 (MQ=255)
                                       ggCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGCACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAgcg                                                                                           >  2:1115746/1‑140 (MQ=255)
                                       ggCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAgcg                                                                                           >  2:1284908/1‑140 (MQ=255)
                                       ggCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAgcg                                                                                           >  1:904950/1‑140 (MQ=255)
                                             tCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGt                                                                                     >  2:1038315/1‑140 (MQ=255)
                                                         gCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTa                                                                         <  1:794776/140‑1 (MQ=255)
                                                         gCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTa                                                                         <  1:1115746/140‑1 (MQ=255)
                                                         gCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTa                                                                         <  2:705388/140‑1 (MQ=255)
                                                          ccGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTAt                                                                        <  2:650732/140‑1 (MQ=255)
                                                           cGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATg                                                                       <  1:1284908/140‑1 (MQ=255)
                                                              tCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTc                                                                    <  2:119371/140‑1 (MQ=255)
                                                                       gCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTacac                                                           <  1:1061952/140‑1 (MQ=255)
                                                                       gCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTacac                                                           <  1:246828/140‑1 (MQ=255)
                                                                         ggATCCCGGAACTGGTCGAAGGGCTGAAAAAATGGGGTCGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCt                                                         <  1:102988/139‑1 (MQ=255)
                                                                          gATCCCGGAACTGGTCGAAGCGCTGAAATAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCtt                                                        >  2:192898/1‑139 (MQ=255)
                                                                           aTCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTAt                                                       >  2:698065/1‑140 (MQ=255)
                                                                           aTCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTAt                                                       >  2:1193215/1‑140 (MQ=255)
                                                                                  aaCTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGAc                                                <  2:756512/140‑1 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATTGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  2:741958/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGATGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCT‑CAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGtgtg                                          >  1:1137204/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           <  1:1038315/140‑1 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:1097141/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  2:564881/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:1188380/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:1203513/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:1264487/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:1072638/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:487096/1‑140 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           <  1:895726/140‑1 (MQ=255)
                                                                                       gTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAgtgt                                           >  1:101068/1‑140 (MQ=255)
                                                                                            aGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGcgcg                                      <  2:530601/140‑1 (MQ=255)
                                                                                                 tGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTa                                 <  2:1264487/140‑1 (MQ=255)
                                                                                                 tGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTa                                 <  1:1222171/140‑1 (MQ=255)
                                                                                                   aaaaaaTGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACt                               <  2:786057/140‑1 (MQ=255)
                                                                                                      aaaTGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGaa                            <  1:559916/140‑1 (MQ=255)
                                                                                                      aaaTGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGaa                            <  2:487096/140‑1 (MQ=255)
                                                                                                        aTGGGGACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATc                          <  1:732745/140‑1 (MQ=255)
                                                                                                          ggggACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTg                        >  2:880724/1‑140 (MQ=255)
                                                                                                           gggACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGa                       <  2:448294/140‑1 (MQ=255)
                                                                                                             gACGCGAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATa                     >  1:68099/1‑140 (MQ=255)
                                                                                                               cgcgAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAg                   >  2:93090/1‑140 (MQ=255)
                                                                                                                gcgAAGATATCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGc                  <  1:817538/140‑1 (MQ=255)
                                                                                                                      atatCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcat            <  2:467417/140‑1 (MQ=255)
                                                                                                                       tatCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcatc           <  1:155549/140‑1 (MQ=255)
                                                                                                                       tatCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcatc           <  2:786137/140‑1 (MQ=255)
                                                                                                                       tatCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcatc           <  1:698065/140‑1 (MQ=255)
                                                                                                                       tatCTGCGTGGTCGCGGGTGGGGTCATTCCGCCGCAGGATTACGCCTTGCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcatc           <  2:1203513/140‑1 (MQ=255)
                                                                                                                       aatCTGCGTGGTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGcatc           <  2:1072638/139‑1 (MQ=255)
                                                                                                                                ggTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAAt  >  2:1271324/1‑140 (MQ=255)
                                                                                                                                ggTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAAt  >  1:405894/1‑140 (MQ=255)
                                                                                                                                ggTCGCTGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAAt  >  1:708132/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                     
ATCGCCCGCCTGGCCGTAGAAAACGACGTTCACGTAGTGGGCGCATCCTCACTGGCTGCCGGTCATAAAACGCTGATCCCGGAACTGGTCGAAGCGCTGAAAAAATGGGGACGCGAAGATATCTGCGTGGTCGCGGGTGGCGTCATTCCGCCGCAGGATTACGCCTTCCTGCAAGAGCGCGGCGTGGCGGCGATTTATGGTCCAGGTACACCTATGCTCGACAGTGTGCGCGACGTACTGAATCTGATAAGCCAGCATCATGATTAAT  >  NC_000913/3062728‑3062995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A