Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A18 F48 I1 R1
|
70 |
76.3 |
2572620 |
98.7% |
2539175 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,975,694 |
C→T |
Y183Y (TAC→TAT) |
wecE → |
dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,975,694 | 0 | C | T | 100.0%
| 283.6
/ NA
| 83 | Y183Y (TAC→TAT) | wecE | dTDP‑4‑dehydro‑6‑deoxy‑D‑glucose transaminase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (49/34); total (49/34) |
TGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAATATACCTGGCGCG > NC_000913/3975561‑3975827
|
tGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGTACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcg < 2:1190012/140‑1 (MQ=255)
tGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcg < 2:894736/140‑1 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg > 1:1189734/1‑140 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg > 1:1279006/1‑140 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg > 1:1271912/1‑140 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg > 1:1227899/1‑140 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg > 1:1219858/1‑140 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg < 1:550711/140‑1 (MQ=255)
ggCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATAcggcgg < 2:621504/140‑1 (MQ=255)
gCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACggcggg > 1:760901/1‑140 (MQ=255)
cGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACggcgggc > 1:331074/1‑140 (MQ=255)
cGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACggcgggc > 1:1018614/1‑140 (MQ=255)
ttGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGgcgggcgg > 1:750621/1‑140 (MQ=255)
ttGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGgcgggcgg > 1:669318/1‑140 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATTTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTg > 1:730118/1‑140 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTg > 1:758048/1‑140 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTg > 1:1013348/1‑140 (MQ=255)
ggCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTg > 2:878697/1‑140 (MQ=255)
aaTTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGcccggc > 1:1202979/1‑138 (MQ=255)
ttgtGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGGAGGCGGCGCGACGCTGAtt > 2:796778/1‑140 (MQ=255)
ttgtGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGAtt > 1:443660/1‑140 (MQ=255)
gtgGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTaa < 1:94894/140‑1 (MQ=255)
tgGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTTAc > 2:114257/1‑140 (MQ=255)
gTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAAGCGGCGCGACGCTTATTAACGa > 1:566464/1‑140 (MQ=255)
tGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGGCGCTGATTAACGATAAAACGt > 2:1092957/1‑140 (MQ=255)
tGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCTGATTAACGATAAAGCGt > 1:881453/1‑140 (MQ=255)
ccGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGGGGCGCGACGCTGATTAACGATAAAACGttt > 2:1108924/1‑139 (MQ=255)
ccGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACCCTGATTAACGATAAAGCGttt > 2:232231/1‑139 (MQ=255)
cGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTaa > 1:529966/1‑140 (MQ=255)
cGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTaa > 2:1126213/1‑140 (MQ=255)
cGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCCTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAAGCGGCCCGACGCTGAATTACGATAAAGCATTaa > 1:1174930/1‑140 (MQ=255)
cTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGGCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCCGACTAACGATAAAGCGTTAATc > 2:826470/1‑140 (MQ=255)
cAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGa < 1:1016602/140‑1 (MQ=255)
aaGGGCGTGATCTCCACTTACAAAGGGCGTGCACTGGGAACTATTGGTCATATTGGTTGCTTGAGCTTCCATGAAACAAAAAACTAAACGGAGGGCGGTGAAGGCGGCGCGACGCTGTTTAACGATAAAGCGTTAAGCGa < 2:730118/139‑1 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCTGTGAAGGCGGGCCGACGCTGATTAACGATTAAGCGTTAATCGaa > 2:136573/1‑140 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGaa < 1:395472/140‑1 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGaa > 2:1074549/1‑140 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGaa < 2:315729/140‑1 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGaa < 1:878697/140‑1 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGaa < 1:454908/140‑1 (MQ=255)
aGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTAAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGTTTAACGATAAGGCGTTAATCGaa < 1:380045/140‑1 (MQ=255)
cGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAg < 1:1108924/140‑1 (MQ=255)
gTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGc < 2:1018614/140‑1 (MQ=255)
aTGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCga > 1:1119136/1‑140 (MQ=255)
tCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGat < 1:413568/140‑1 (MQ=255)
tCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGat < 2:669318/140‑1 (MQ=255)
aaGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGTAACCAAAAACTATACGGCGGGCGGGGGTGGCGGCGCGACGCCAATTAAAGATAAAACGGTTATCGAAAGAGACGAGATCATCCGTGaa > 2:887687/1‑140 (MQ=255)
aGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGaaa < 2:750621/140‑1 (MQ=255)
ggCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAg > 1:1194029/1‑140 (MQ=255)
cGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAggg > 1:326116/1‑140 (MQ=255)
cGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAggg > 2:735235/1‑140 (MQ=255)
cGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCTGATTAACGATAAAGCGGTAATCGAACGGGCCGGGATCATCCGTGAAAAggg > 2:1232420/1‑140 (MQ=255)
tGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTTTTTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCa > 2:285056/1‑140 (MQ=255)
tGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAACGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCa > 2:682180/1‑140 (MQ=255)
tGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAAc < 2:443660/140‑1 (MQ=255)
gggAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAAcc > 1:1112421/1‑140 (MQ=255)
gggAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAAcc < 1:1099030/140‑1 (MQ=255)
ggAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGTCGGGTAAGGCGGCGCGACGCTGATTAACGATAAAACGTTAATCGAACGAGCCGAGATCATCCGTGGAAAAGGCACTAAccc > 2:143670/1‑139 (MQ=255)
aaCCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCa < 2:1189734/140‑1 (MQ=255)
aaCCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCa < 2:529966/140‑1 (MQ=255)
ggTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGtt < 1:826470/140‑1 (MQ=255)
ggTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGtt < 2:1279006/140‑1 (MQ=255)
gTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGGGGCGCGACGCTGATTAACGATAAAACGGTAATCGAACGAGCCGAGAACATCCGGGAAAAGGGCACTAAACGCAGCCAGttc > 2:291258/1‑140 (MQ=255)
cATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCCAGATCATCCGTGAAAAAGGCACTAACCGCAGCCAGttttt > 2:43920/1‑140 (MQ=255)
atTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTTACGATAAAGCGTTAAACGCACGAGCCGAGGTCATCCCTGAAAAGGGCACTAACCGCATCCAGTTCTTccc > 2:577691/1‑139 (MQ=255)
atTGGCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCCGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGGACTAACCGCAGCCAGTTCTTCCg > 2:320839/1‑140 (MQ=255)
ggCTGCTTTAGCTTCCATGAAACCAAAAACTATACGGCGGGGGGTGAAAGCGGCGCGTCGCCGATTAACGATAAAGCGTTAATCGAACGAGGCGAGGACATCCCTGAAAAGGGGACTAACCGCAACCAGTTTTTCCGTgt > 2:540858/1‑139 (MQ=255)
gctgctTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGt < 2:1271912/140‑1 (MQ=255)
gctgctTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGt < 1:1056196/140‑1 (MQ=255)
ctgctTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTc < 1:924148/140‑1 (MQ=255)
gctTTAGCTTCCATGAACCAAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAg < 1:796778/140‑1 (MQ=255)
ttttAGCTTCCATAAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAgg < 1:136573/139‑1 (MQ=255)
ctTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGAATAACGATAAAGCGTTAATTGAAGGAGACGAGAGCATCCGTGTAAAGGGCACTAACCTCCGCCAGTTCTTCCCTGGGCAgg > 2:575137/1‑140 (MQ=255)
ctTTAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGGGAAGGCGGCGCGACGCTGATTAACGATAAAACGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAgg > 2:394078/1‑140 (MQ=255)
ttAGTTTCAATGAAACCAAAAACTATACGGCGGGCGGTGAAGGGGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTc < 2:1285471/140‑1 (MQ=255)
ttAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTc < 1:143670/140‑1 (MQ=255)
tAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCg < 1:291258/140‑1 (MQ=255)
tAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCg < 1:682180/140‑1 (MQ=255)
tAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCg < 2:1112421/140‑1 (MQ=255)
tAGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCg < 1:86389/140‑1 (MQ=255)
aGCTTCCATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGa < 1:394078/140‑1 (MQ=255)
cATGAAACCAAAAACTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAata > 2:1260844/1‑140 (MQ=255)
cATGAAACC‑AAAACTATACGGCGGGCGGTGAAGGCGGCGCGACCCTGATTAACGCAAAAGCGTTAATCGGACGAGGCGAGATAATCCCTGAAAAGGGTACTAACCCCAGCCAGTTCTTCCCTGGTCGGGTGGATAAatat > 2:752604/1‑140 (MQ=255)
aaaCTATACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAAGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAATATACCCGGcgcg > 2:128294/1‑140 (MQ=255)
|
TGGCGTTGGCGAAAAAGCATAATTTGTTTGTGGTAGAAGATGCCGCTCAGGGCGTGATGTCCACTTACAAAGGGCGTGCACTGGGAACCATTGGTCATATTGGCTGCTTTAGCTTCCATGAAACCAAAAACTACACGGCGGGCGGTGAAGGCGGCGCGACGCTGATTAACGATAAAGCGTTAATCGAACGAGCCGAGATCATCCGTGAAAAGGGCACTAACCGCAGCCAGTTCTTCCGTGGTCAGGTCGATAAATATACCTGGCGCG > NC_000913/3975561‑3975827
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
