Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F48 I1 R1
|
56 |
123.4 |
4244010 |
99.1% |
4205813 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,972,258 |
T→G |
N333K (AAT→AAG) |
wecC → |
UDP‑N‑acetyl‑D‑mannosamine dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,972,258 | 0 | T | G | 100.0%
| 330.1
/ NA
| 86 | N333K (AAT→AAG) | wecC | UDP‑N‑acetyl‑D‑mannosamine dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (36/50); total (36/50) |
CGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTACTCTGGC > NC_000913/3972122‑3972392
|
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTTGCTGAGTGCCTGGCGGCCACCGATAAATCCGCCAGTGAACT‑GAAAAACGCCCTCTTTGGTCTGGCGTTTAAAACGAAGAtt > 2:474515/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTTTCTGGCGGCTACCGATAAACTCGCCAGTGAACT‑GAAAATCGCCTTCTTTTGTCTGGTGTTTAAACCGAAGAtt > 2:917056/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCTCCTGCTTTGGTCTGGCGTTTAAACCGAAGAtt > 2:443/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGAtt > 1:432226/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGAtt > 1:1960922/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGAtt > 2:56624/1‑140 (MQ=255)
cgcgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGAGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGAtt > 1:181543/1‑140 (MQ=255)
cgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATtga > 1:1438366/1‑140 (MQ=255)
cgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATtga > 2:1946427/1‑140 (MQ=255)
cgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATtga > 2:1520903/1‑140 (MQ=255)
cgcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGAGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATTGCCTGCTTTGGTCTGGCGCTTTAACCGAAGATtgt > 2:597603/1‑139 (MQ=255)
gcgAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATtgat < 1:126266/140‑1 (MQ=255)
aaGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGAc < 1:279990/140‑1 (MQ=255)
cGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGcgcg < 2:1260628/140‑1 (MQ=255)
gATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGa < 1:1250691/140‑1 (MQ=255)
caAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGcc < 2:1985745/140‑1 (MQ=255)
ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTTCCCGGAAAGGCGCCAGTGAAATGGAAAATC‑CCCGCGTTGGTCTGGCGTTTAAACCGAAGAATTATGACCTGCGCGACAGCCGTGCGac > 2:1379736/1‑139 (MQ=255)
ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGGACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGAt > 2:85954/1‑140 (MQ=255)
ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGAt > 2:1386906/1‑140 (MQ=255)
ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGAt > 1:348333/1‑140 (MQ=255)
ttCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCCGATTGCCCGGCGGCTAACGATAAACGCGCCAGAGAACT‑GAAAATCGCCCGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTTCGCGCAAGCCCGGCGAt > 2:709852/1‑140 (MQ=255)
tCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATg > 1:899996/1‑140 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 2:1960922/140‑1 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 1:1930239/140‑1 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 1:1430365/140‑1 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 1:2113703/140‑1 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 1:85954/140‑1 (MQ=255)
tGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATCGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGa < 2:348333/140‑1 (MQ=255)
gggTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGGTACCGATAAACTCGCCAGGGAAAT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTTAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGaa > 2:1452758/1‑140 (MQ=255)
ggTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGaaa < 1:867888/140‑1 (MQ=255)
tATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCg > 1:565643/1‑140 (MQ=255)
tCGATCAGGTGAAAGCGGCGGTGGCTGATTTCCTGGCGGCTACCGTTAAACGCGCCAGTGAACT‑GAAAATCCCCTGCTTTGGTCTTGCGGTTTAACCGAAGATTGATTAACTGCGCGAAAGACCGGCGCTGGAAATCGCt > 2:1157695/1‑140 (MQ=255)
tCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCt > 2:181103/1‑140 (MQ=255)
tCGATCAGGTGAAAGCGGCGGAGGCAGATTGCCCGGCTGGTAACGGAAAACGCGCCAGTGAACT‑GAAAATCGGCTGCTTTGGTCTGGCGGTTAAAACGAAGATTGATGAAGTGCGCCAAAGCCCGGCGGTGGCAATCGCt > 2:738793/1‑140 (MQ=255)
cGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTTCGCGAAAGCCCGGCGATGGAAATCGCTg < 1:233977/140‑1 (MQ=255)
cGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTg < 1:738706/140‑1 (MQ=255)
cGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTg > 1:1416607/1‑140 (MQ=255)
gATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGa < 2:899996/140‑1 (MQ=255)
aTCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATTACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGaa > 1:1851107/1‑140 (MQ=255)
cAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACt > 2:1223844/1‑140 (MQ=255)
aGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTTGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTg > 1:338369/1‑140 (MQ=255)
ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGa > 2:787511/1‑140 (MQ=255)
ggTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGa > 2:1136132/1‑140 (MQ=255)
gTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTTAACTGAt > 2:601914/1‑140 (MQ=255)
gTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGAt < 2:1667495/140‑1 (MQ=255)
gTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGAt < 1:1868396/140‑1 (MQ=255)
gAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCg < 1:488580/140‑1 (MQ=255)
gAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCg < 2:1438366/140‑1 (MQ=255)
aaGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGcc < 1:181103/140‑1 (MQ=255)
aaGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGcc < 1:1136132/140‑1 (MQ=255)
cggTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTgg > 1:654774/1‑140 (MQ=255)
gCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAg < 1:1866248/140‑1 (MQ=255)
aTTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAgcggc > 2:306023/1‑140 (MQ=255)
ttGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAgcggcg > 2:1542199/1‑140 (MQ=255)
tGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGa < 2:1220575/140‑1 (MQ=255)
ccTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGaaa > 2:818779/1‑140 (MQ=255)
tGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAAct < 2:383972/140‑1 (MQ=255)
tACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttg < 2:339140/140‑1 (MQ=255)
tACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttg < 2:1137643/140‑1 (MQ=255)
aCCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttgt > 1:641075/1‑140 (MQ=255)
aCCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttgt < 2:1823556/140‑1 (MQ=255)
ccGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttgtt < 2:1383230/140‑1 (MQ=255)
ccGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttgtt < 1:787511/140‑1 (MQ=255)
ccGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGgttgtt < 1:818779/140‑1 (MQ=255)
cGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGttgttg < 2:375727/140‑1 (MQ=255)
gaaaaaCACGCCAGTGAACT‑GAAAAGCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAATCTCTGGTTGTTGa < 2:1868290/137‑1 (MQ=255)
aTAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAg > 2:615080/1‑140 (MQ=255)
tAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGc < 1:1136954/140‑1 (MQ=255)
tAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGc < 1:1223844/140‑1 (MQ=255)
aaaCGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGTAACTCTGGTTGTTGAGcc < 1:1386906/140‑1 (MQ=255)
aaCGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCt < 1:601914/140‑1 (MQ=255)
aCGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTa < 1:328798/140‑1 (MQ=255)
aCGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTa < 2:1564621/140‑1 (MQ=255)
cgcCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACa > 2:7398/1‑140 (MQ=255)
gcCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAAAAt > 2:1864796/1‑140 (MQ=255)
ccAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATc < 1:1542199/140‑1 (MQ=255)
ccAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATc > 1:1570216/1‑140 (MQ=255)
ccAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATc > 2:1359593/1‑140 (MQ=255)
cAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATcc > 2:1048522/1‑140 (MQ=255)
t‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTg > 2:1966796/1‑140 (MQ=255)
aaaaTCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGcc > 2:1690405/1‑140 (MQ=255)
aaaTCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCg > 1:856/1‑140 (MQ=255)
aaTCGCCTGCTTTGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGa > 1:1158675/1‑140 (MQ=255)
gtttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGa < 1:917056/139‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGGCCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 1:1359593/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 1:1520903/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 2:1158675/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 1:1946427/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 1:1864796/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 2:654774/140‑1 (MQ=255)
ttGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 1:7398/140‑1 (MQ=255)
ttGATCTGGAATTTAAGCCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGAcc < 2:702154/140‑1 (MQ=255)
tGGTCTGGCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCg < 2:1574963/140‑1 (MQ=255)
gCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCtttt > 2:698961/1‑139 (MQ=255)
gCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTg > 1:1252369/1‑140 (MQ=255)
gCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTg > 1:1274117/1‑140 (MQ=255)
gCGTTTAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTg > 2:2025793/1‑140 (MQ=255)
ttAAACCGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTAct < 2:1979085/140‑1 (MQ=255)
ccGAAGATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTACTCTGgc < 2:1386953/140‑1 (MQ=255)
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CGCGCGAAGTGAACGATCACAAACCGTTCTGGGTTATCGATCAGGTGAAAGCGGCGGTGGCTGATTGCCTGGCGGCTACCGATAAACGCGCCAGTGAACT‑GAAAATCGCCTGCTTTGGTCTGGCGTTTAAACCGAATATTGATGACCTGCGCGAAAGCCCGGCGATGGAAATCGCTGAACTGATCGCCCAGTGGCATAGCGGCGAAACTCTGGTTGTTGAGCCTAACATCCACCAGTTGCCGAAAAAACTGACCGGGCTTTGTACTCTGGC > NC_000913/3972122‑3972392
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
