Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F48 I1 R1
|
56 |
123.4 |
4244010 |
99.1% |
4205813 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,119,723 |
G→T |
R209R (CGC→CGA) |
menA ← |
1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,119,723 | 0 | G | T | 100.0%
| 604.5
/ NA
| 169 | R209R (CGC→CGA) | menA | 1,4‑dihydroxy‑2‑naphthoate octaprenyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (74/95); total (74/95) |
Only 100 of 171 total aligned reads displayed.
GCCAGCCCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCGCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCAACC > NC_000913/4119587‑4119859
|
ccagccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCgg > 1:990899/1‑139 (MQ=255)
ccagccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGt < 1:802984/140‑1 (MQ=255)
ccagccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGt < 1:2020426/140‑1 (MQ=255)
ccagacCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCTCTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGt < 2:1325593/140‑1 (MQ=255)
cagccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTc < 2:318694/140‑1 (MQ=255)
agccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCg < 1:1536458/140‑1 (MQ=255)
agccCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCg < 1:2117865/140‑1 (MQ=255)
ccccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCt > 2:963240/1‑140 (MQ=255)
ccccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCt > 1:1837411/1‑140 (MQ=255)
ccccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCt > 1:633251/1‑140 (MQ=255)
ccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTAt < 2:2013677/140‑1 (MQ=255)
ccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTAt < 2:1884818/140‑1 (MQ=255)
ccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTAt < 1:1211995/140‑1 (MQ=255)
ccACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTAt < 2:1376965/140‑1 (MQ=255)
acaGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTg < 1:507901/140‑1 (MQ=255)
gCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGatat < 1:1199785/140‑1 (MQ=255)
tATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCa > 2:846857/1‑140 (MQ=255)
aTGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCAc > 1:706918/1‑140 (MQ=255)
aTGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCAc > 1:1970909/1‑140 (MQ=255)
tGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACg < 2:974683/140‑1 (MQ=255)
tGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACg < 1:1856009/140‑1 (MQ=255)
tGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACg < 1:132114/140‑1 (MQ=255)
tGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACg < 2:1448328/140‑1 (MQ=255)
gCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGc < 1:1247338/140‑1 (MQ=255)
gCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGc < 2:633251/140‑1 (MQ=255)
cAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCa < 1:300853/140‑1 (MQ=255)
aaGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCa < 2:723975/139‑1 (MQ=255)
cGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGt > 1:966251/1‑140 (MQ=255)
cGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGt > 2:1605242/1‑140 (MQ=255)
cGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGt > 2:396638/1‑140 (MQ=255)
cGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGt < 2:1399890/140‑1 (MQ=255)
cGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGt < 2:706918/140‑1 (MQ=255)
agagATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGttatta < 1:545238/140‑1 (MQ=255)
agagATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGttatta < 2:1495590/140‑1 (MQ=255)
agaTTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAat > 2:900844/1‑140 (MQ=255)
ttAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATAtt < 1:1115904/140‑1 (MQ=255)
ttAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATAtt < 1:391950/140‑1 (MQ=255)
ttAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATAtt < 1:1185363/140‑1 (MQ=255)
cAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTa < 2:1981304/140‑1 (MQ=255)
aaGCGCCAGACACACCAGCGAGCTCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTa < 2:1715070/139‑1 (MQ=255)
gcgcCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACt > 2:652345/1‑140 (MQ=255)
gcgcCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACt > 1:1761197/1‑140 (MQ=255)
cgcCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTg > 1:683236/1‑140 (MQ=255)
gcCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGc > 2:1071486/1‑140 (MQ=255)
ccAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGcc < 2:1761197/140‑1 (MQ=255)
gACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGtt > 2:1083020/1‑140 (MQ=255)
acacacCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTg < 1:396638/140‑1 (MQ=255)
acCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCcag > 2:71220/1‑140 (MQ=255)
acCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCcag > 2:1201437/1‑140 (MQ=255)
cAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCcagca < 1:1508687/140‑1 (MQ=255)
cGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGc > 2:522359/1‑140 (MQ=255)
cGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGc > 2:1269784/1‑140 (MQ=255)
gAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGcc > 2:1929780/1‑140 (MQ=255)
aGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCg > 1:1966233/1‑140 (MQ=255)
aGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCg > 1:315141/1‑140 (MQ=255)
ccATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCAt > 1:454731/1‑140 (MQ=255)
cATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATg < 1:1905213/140‑1 (MQ=255)
cATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATg < 1:1083020/140‑1 (MQ=255)
aTCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGc > 2:1014104/1‑140 (MQ=255)
agcagGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGt < 1:1071486/140‑1 (MQ=255)
agcagGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGt < 1:946592/140‑1 (MQ=255)
ggcaggcaTGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGcc < 1:1644184/140‑1 (MQ=255)
aggcaTGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTGAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGa > 1:831478/1‑140 (MQ=255)
aggcaTGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGa > 2:824542/1‑140 (MQ=255)
caTGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAgg > 2:1420266/1‑140 (MQ=255)
tGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGAt < 1:1693492/140‑1 (MQ=255)
tGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGAt < 1:846857/140‑1 (MQ=255)
aTAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCa < 1:620161/140‑1 (MQ=255)
tAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCg < 2:952370/123‑1 (MQ=255)
gacgCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGcc < 2:1966233/140‑1 (MQ=255)
acgCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCg < 1:72062/140‑1 (MQ=255)
acgCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTGTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATGAATATTCAGTACTGACGTTGCCAGCAGGCGGCATGCGGTCGCTGGAAGGATCATTGGCg < 2:1184936/140‑1 (MQ=255)
cgcgTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGaa > 2:150897/1‑140 (MQ=255)
gcgTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAAt < 2:1408474/140‑1 (MQ=255)
gcgTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAAt > 2:1856923/1‑140 (MQ=255)
gTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCa < 1:1014104/140‑1 (MQ=255)
gTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCa < 2:40692/140‑1 (MQ=255)
gTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCa < 1:1090100/140‑1 (MQ=255)
acttcacCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTT‑CCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTa < 1:963240/140‑1 (MQ=255)
cttcacCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTa < 2:683236/140‑1 (MQ=255)
ttcacCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTAt < 2:966251/140‑1 (MQ=255)
ccTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGc > 2:62239/1‑140 (MQ=255)
ccTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGc < 1:337777/140‑1 (MQ=255)
acTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTTCCGGAATCAATGTATGAGc < 2:828568/139‑1 (MQ=255)
aaGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTg < 1:873065/140‑1 (MQ=255)
aGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGt > 2:586193/1‑140 (MQ=255)
aGCGCACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGt < 1:376904/140‑1 (MQ=255)
gcgcACCACCAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTa < 2:399244/140‑1 (MQ=255)
accaccAGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATa > 1:921425/1‑140 (MQ=255)
ccaccaGCGTGTTTTTGCCATTTTCTCGGGCGCTATTGATATCACGCAGGTTATTAATATTCACTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATAc > 2:482717/1‑140 (MQ=255)
ccaGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAg < 2:232644/140‑1 (MQ=255)
ccaGCGTGTTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAg < 2:1970909/140‑1 (MQ=255)
tgtTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTcccc > 1:1352069/1‑140 (MQ=255)
tgtTTTTGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGC‑GGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCa > 2:1766800/1‑140 (MQ=255)
tttttGCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCAt < 1:62239/140‑1 (MQ=255)
gCCATTTTCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGacac > 1:1022696/1‑140 (MQ=255)
ttttCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCaa < 2:1681921/140‑1 (MQ=255)
ttttCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCaa > 2:1673004/1‑140 (MQ=255)
tttCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCAAc > 1:512592/1‑140 (MQ=255)
ttCTCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCAAcc < 1:98681/140‑1 (MQ=255)
|
GCCAGCCCCACAGGCTATGCAGCGAAAAGAGATTAAACAGCGCCAGACACACCAGCGAGCCCATCAGCAGGCAGGCATGATAACGACGCGCGTTCACTTCACCTAAGCGCACCACCAGCGTGTTTTTGCCATTTTCGCGGTCGCTATTGATATCACGCAGGTTATTAATATTCAGTACTGCCGTTGCCAGCAGGCCGCATGCGGTCGCCGGAAGGATCAGTGCCGGAATCAATGTATGAGCCTGTAAATACCAGCTCCCCATGACACTCAACC > NC_000913/4119587‑4119859
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
