Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F48 I1 R1 79 90.7 3162666 99.0% 3131039 139.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,503,120 C→A R261S (CGC→AGC)  frlC → fructoselysine 3‑epimerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,503,1200CA100.0% 246.1 / NA 70R261S (CGC→AGC) frlCfructoselysine 3‑epimerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base A (49/21);  total (49/21)

CGACACGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAT  >  NC_000913/3502984‑3503253
                                                                                                                                        |                                                                                                                                     
agACACGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGcc                                                                                                                                    <  2:450796/139‑1 (MQ=255)
    acGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGgc                                                                                                                                >  1:404124/1‑140 (MQ=255)
     cGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGgcg                                                                                                                               >  2:356082/1‑140 (MQ=255)
                  tGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTc                                                                                                                  >  1:1572026/1‑140 (MQ=255)
                  tGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATG‑ATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTcg                                                                                                                 >  2:1398099/1‑140 (MQ=255)
                    gagaAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTcgc                                                                                                                >  2:1036582/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGTACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           >  1:630048/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           <  2:1148668/140‑1 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           >  2:705829/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           >  2:735211/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           >  2:1488381/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGCATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgct                                                                                                           >  1:1508035/1‑140 (MQ=255)
                         ggCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATG‑ATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgctg                                                                                                          <  1:1398099/140‑1 (MQ=255)
                          gCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCgctg                                                                                                          <  1:589052/140‑1 (MQ=255)
                                 gCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCgg                                                                                                   <  2:1508035/140‑1 (MQ=255)
                                   cGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCggag                                                                                                 >  2:831422/1‑140 (MQ=255)
                                   cGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCggag                                                                                                 >  2:875581/1‑140 (MQ=255)
                                     cTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCggagga                                                                                               >  1:450249/1‑140 (MQ=255)
                                     cTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCggagga                                                                                               <  1:875581/140‑1 (MQ=255)
                                      tGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGAt                                                                                              <  2:630048/140‑1 (MQ=255)
                                      tGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGAt                                                                                              <  1:705829/140‑1 (MQ=255)
                                        cGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATga                                                                                            <  1:980305/140‑1 (MQ=255)
                                                      cgATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCt                                                                              >  1:195580/1‑140 (MQ=255)
                                                      cgATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCt                                                                              >  2:1372439/1‑140 (MQ=255)
                                                              ttGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACaa                                                                      <  2:1158543/140‑1 (MQ=255)
                                                                gAGCGGGGCTATGAGGGTTACTGTATGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATc                                                                    >  1:360398/1‑140 (MQ=255)
                                                                gAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATc                                                                    <  1:1036582/140‑1 (MQ=255)
                                                                   cGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGc                                                                 >  2:974342/1‑140 (MQ=255)
                                                                                gTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCg                                                    >  2:810170/1‑140 (MQ=255)
                                                                                gTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCg                                                    >  2:19169/1‑140 (MQ=255)
                                                                                gTTACTGTACGGTGGAGCTGGAGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCg                                                    >  1:564627/1‑140 (MQ=255)
                                                                                     tGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATc                                               >  2:1321910/1‑140 (MQ=255)
                                                                                        aCGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAc                                            >  2:222151/1‑140 (MQ=255)
                                                                                        aCGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAG‑GATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                           <  1:77174/140‑1 (MQ=255)
                                                                                         cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCATCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                           >  1:1411912/1‑140 (MQ=255)
                                                                                         cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                           >  1:1545861/1‑140 (MQ=255)
                                                                                         cGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTAcc                                           <  2:1411912/140‑1 (MQ=255)
                                                                                            tGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGc                                        >  2:754627/1‑140 (MQ=255)
                                                                                              gAGCTGGTGTCGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGTACGCTTTCGCGCGCTCCTGCCGGCGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCaa                                      >  2:1502227/1‑140 (MQ=255)
                                                                                              gAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCaa                                      >  2:253628/1‑140 (MQ=255)
                                                                                               aGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAAc                                     >  2:1442411/1‑140 (MQ=255)
                                                                                               aGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAAc                                     <  1:232977/140‑1 (MQ=255)
                                                                                                 cTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTg                                   >  1:628303/1‑140 (MQ=255)
                                                                                                    gTGACGATGTATATGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGACATCTACCCGCAACTGAAt                                <  1:810170/140‑1 (MQ=255)
                                                                                                    gTGACGACCTATCTGAGCGTGCCCAGGCTCTATGCAATAAAGGCGCTGGAACGTTTTCGCGCTCTGATGCCGAAGGATGAGAGATGAAAACCCTGGCGAGAATCGGCGATAACTGCGTCGATATCTACGCGCAACTGAAt                                <  2:1236311/140‑1 (MQ=255)
                                                                                                              atatGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGtttt                      >  1:388240/1‑140 (MQ=255)
                                                                                                              atatGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGtttt                      >  1:1287057/1‑140 (MQ=255)
                                                                                                               aatGAACGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTc                     <  2:34293/139‑1 (MQ=255)
                                                                                                                     cGAGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCgg               >  1:808166/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGGGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  2:1515473/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGATTAAAGCGTTTTCTGGCGGTa             >  1:237297/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  2:1114293/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  2:892166/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  2:505290/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  2:1406448/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:1345733/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:1367795/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:209418/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:350354/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:664444/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTa             >  1:98669/1‑140 (MQ=255)
                                                                                                                       aGCCCAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGCCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCggga             >  2:947108/1‑138 (MQ=255)
                                                                                                                         cccAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATACCTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAAt           >  2:910355/1‑140 (MQ=255)
                                                                                                                         cccAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCt                    >  1:81299/1‑131 (MQ=255)
                                                                                                                         cccAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCt                    <  2:81299/131‑1 (MQ=255)
                                                                                                                           cAGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGc         <  1:735211/140‑1 (MQ=255)
                                                                                                                            aGACTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCg        <  1:974342/140‑1 (MQ=255)
                                                                                                                              aCTCTATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGt      <  2:799446/140‑1 (MQ=255)
                                                                                                                                 ctATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCaa   <  2:564627/140‑1 (MQ=255)
                                                                                                                                 ctATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCaa   <  1:1420386/140‑1 (MQ=255)
                                                                                                                                  tATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCCACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAt  >  2:37740/1‑140 (MQ=255)
                                                                                                                                  tATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAt  >  2:560799/1‑140 (MQ=255)
                                                                                                                                  tATGCCAGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAt  >  1:1228181/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                     
CGACACGCATTACATTCCTGGAGAAGGCAAAATGCCGCTGCGGGAACTGATGCGCGATATTATTGAGCGGGGCTATGAGGGTTACTGTACGGTGGAGCTGGTGACGATGTATATGAACGAGCCCAGACTCTATGCCCGCCAGGCGCTGGAACGCTTTCGCGCGCTGCTGCCGGAGGATGAGAGATGAAAACCCTGGCGACAATCGGCGATAACTGCGTCGATATCTACCCGCAACTGAATAAAGCGTTTTCTGGCGGTAATGCGGTCAAT  >  NC_000913/3502984‑3503253

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A