Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F48 I1 R1
|
62 |
93.4 |
3176452 |
99.2% |
3151040 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,994,412 |
C→A |
pseudogene (474/503 nt) |
pbl → |
transglycosylase domain‑containing protein Pbl |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,994,412 | 0 | C | A | 100.0%
| 454.1
/ NA
| 125 | pseudogene (474/503 nt) | pbl | transglycosylase domain‑containing protein Pbl |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (72/53); total (72/53) |
Only 100 of 125 total aligned reads displayed.
TTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAACTAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGAGTCTA > NC_000913/2994275‑2994547
|
tataACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGa > 2:239428/1‑139 (MQ=255)
ccATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATct > 2:546445/1‑139 (MQ=255)
tCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCt < 2:722578/140‑1 (MQ=255)
gTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAg > 2:32275/1‑140 (MQ=255)
tgGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCaaa > 1:70666/1‑140 (MQ=255)
gAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAAt < 2:377099/140‑1 (MQ=255)
aGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGAAAAATg < 1:1240525/140‑1 (MQ=255)
cGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCt > 2:695119/1‑140 (MQ=255)
cGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCt > 1:442361/1‑140 (MQ=255)
tGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTaa > 1:762681/1‑140 (MQ=255)
tGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTaa > 1:1414778/1‑140 (MQ=255)
tGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTaa > 1:453680/1‑140 (MQ=255)
tGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTaa > 1:97295/1‑140 (MQ=255)
tGGCAATGCCGGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTaa > 2:1503045/1‑140 (MQ=255)
gCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAg < 2:550262/140‑1 (MQ=255)
aTGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCct < 1:1208243/140‑1 (MQ=255)
gCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCctct < 2:275342/140‑1 (MQ=255)
gCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCctct < 1:695119/140‑1 (MQ=255)
gCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCctct < 1:83905/140‑1 (MQ=255)
gCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCctct > 1:1393299/1‑140 (MQ=255)
gCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCctct < 1:1478685/140‑1 (MQ=255)
ccTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCtt > 2:875103/1‑140 (MQ=255)
atGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCttt < 2:986352/139‑1 (MQ=255)
ggggACTTATAATGCGGGTTTTGCAATGGATAACC‑AAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCtttttt > 2:302345/1‑140 (MQ=255)
gggACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCtttttt > 1:1150647/1‑140 (MQ=255)
gggACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCtttttt < 1:55419/140‑1 (MQ=255)
cTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtat > 1:562555/1‑140 (MQ=255)
attATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtat < 2:70666/139‑1 (MQ=255)
ttATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtata < 2:902595/140‑1 (MQ=255)
tataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCtttttttt > 1:1182739/1‑136 (MQ=255)
tataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtatat < 1:231374/140‑1 (MQ=255)
tataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtatat > 1:1529366/1‑140 (MQ=255)
tataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtatat < 2:1319033/140‑1 (MQ=255)
ataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtatata > 1:417910/1‑140 (MQ=255)
ataATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTtatata < 1:1331550/140‑1 (MQ=255)
taATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAg > 1:342437/1‑140 (MQ=255)
gggTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCaaa < 1:875103/140‑1 (MQ=255)
gggTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCaaa < 1:298434/140‑1 (MQ=255)
gggTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCaaa < 2:1150647/140‑1 (MQ=255)
ggTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAac > 1:1021900/1‑140 (MQ=255)
ggTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAac > 1:268264/1‑140 (MQ=255)
tttGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACAcc > 2:692554/1‑140 (MQ=255)
tttGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACAcc > 1:300318/1‑140 (MQ=255)
tGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCa > 1:279499/1‑140 (MQ=255)
ggATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGATATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTa > 1:953965/1‑140 (MQ=255)
aaCCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGc > 2:805566/1‑140 (MQ=255)
agaCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCaa < 2:610927/140‑1 (MQ=255)
agaCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCaa < 2:1529366/140‑1 (MQ=255)
agaCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCaa < 2:453680/140‑1 (MQ=255)
agaCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCaa < 2:562555/140‑1 (MQ=255)
gaCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAAc > 1:1147499/1‑140 (MQ=255)
aCAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACt < 2:442361/140‑1 (MQ=255)
gCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGa < 2:762681/140‑1 (MQ=255)
acAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGa < 2:868569/139‑1 (MQ=255)
cAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGAt > 2:1179483/1‑140 (MQ=255)
aaTATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATa < 1:32275/140‑1 (MQ=255)
cccAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACtgt > 1:330771/1‑140 (MQ=255)
cccAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACtgt > 2:1581808/1‑140 (MQ=255)
cccAAAATATATATTGCATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACtgt > 1:913916/1‑140 (MQ=255)
ccAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACtgtg < 2:279499/140‑1 (MQ=255)
cAAAATATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGa > 2:135916/1‑140 (MQ=255)
aaaaTATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGaa < 2:913916/140‑1 (MQ=255)
aaTATATATTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACa > 1:110865/1‑140 (MQ=255)
atTGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAAtt > 1:1126534/1‑140 (MQ=255)
atGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAAttt < 2:417910/139‑1 (MQ=255)
tGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAAtttt > 2:1435915/1‑139 (MQ=255)
tGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAAtttt > 2:1227138/1‑139 (MQ=255)
tGTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAAtttt > 1:625896/1‑139 (MQ=255)
gTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttct < 1:546445/140‑1 (MQ=255)
gTATATACCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttct > 2:429599/1‑140 (MQ=255)
tatataCCAGGCTTAATGAAATAGACAATCGTAGGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttctt > 1:440405/1‑140 (MQ=255)
tatataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttctt > 2:1446249/1‑140 (MQ=255)
tatataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttctt > 1:1420576/1‑140 (MQ=255)
tatataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttctt > 1:583029/1‑140 (MQ=255)
atataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttcttt > 2:720722/1‑139 (MQ=255)
atataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttcttc > 2:535044/1‑140 (MQ=255)
atataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttcttc > 2:782711/1‑140 (MQ=255)
atataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATttcttc < 2:268264/140‑1 (MQ=255)
tataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCa < 2:330771/140‑1 (MQ=255)
tataCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCa < 1:1238852/140‑1 (MQ=255)
aCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATgt > 2:507809/1‑139 (MQ=255)
aCCAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATgt > 2:578870/1‑139 (MQ=255)
cAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATTTAATTTCTTCATGata > 1:1151966/1‑140 (MQ=255)
cAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGata < 1:1502902/140‑1 (MQ=255)
cAGGCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGata > 1:841890/1‑140 (MQ=255)
ggCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACATAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATAtt < 2:97295/140‑1 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAACCACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 2:1144816/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATAttt > 2:626095/1‑139 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATAttt > 2:121703/1‑139 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 1:1165789/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 2:1156319/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 2:1571991/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 2:1365996/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 1:516550/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 2:605351/1‑140 (MQ=255)
gCTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTg > 1:65496/1‑140 (MQ=255)
cTTAATGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGa < 2:1327730/140‑1 (MQ=255)
aaTGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGAGTc > 2:710375/1‑140 (MQ=255)
tGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGAGTCTa > 1:1136843/1‑140 (MQ=255)
tGAAATAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGAGTCTa < 2:110865/140‑1 (MQ=255)
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TTATATAACCATTTTTCACGTTGTGGAGTAACGTGGCAATGCCTGGGGACTTATAATGCGGGTTTTGCAATGGATAACCAAAAAAAGAGACAGCAATATGCCCCAAAATATATATTGTATATACCAGGCTTAATGAACTAGACAATCGTAAGGCTTCAGCAAAATGAGCCTAAAGCCTCTTTTTTTTATATAGTGCAAACACCCATACGTAAAGCTGTTTTGATCAACTCGATACCACTGTGAACATCTAATTTCTTCATGATATTGAGTCTA > NC_000913/2994275‑2994547
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
