Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F48 I1 R1
|
70 |
151.6 |
5072932 |
98.7% |
5006983 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,288,595 |
C→A |
P169Q (CCA→CAA) |
yraI → |
putative fimbrial chaperone YraI |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,288,595 | 0 | C | A | 100.0%
| 433.2
/ NA
| 120 | P169Q (CCA→CAA) | yraI | putative fimbrial chaperone YraI |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (68/52); total (68/52) |
Only 100 of 125 total aligned reads displayed.
TGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCCAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCT > NC_000913/3288458‑3288731
|
tGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCaaa < 2:1843844/140‑1 (MQ=255)
tGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCaaa < 1:2466978/140‑1 (MQ=255)
agcgaaCGAGTTGACGCTGGTATTTATAACACGGATCAAAATGTTTTATAGCTCCGCACTCCTGAAGGGCCGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGGCCATTCACTCAATATATATAACCaaa < 2:348457/136‑1 (MQ=255)
aaCGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGa > 2:1514813/1‑140 (MQ=255)
aaCGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGa > 2:1715897/1‑140 (MQ=255)
aCGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACt > 2:1521450/1‑137 (MQ=255)
gAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAata < 1:735716/140‑1 (MQ=255)
ttGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTa > 1:466704/1‑140 (MQ=255)
tGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTAc > 2:1055955/1‑140 (MQ=255)
tGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTAc > 1:1475771/1‑140 (MQ=255)
gACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTAcg < 2:1880631/140‑1 (MQ=255)
tATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTAttt > 2:1014167/1‑140 (MQ=255)
tATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTAttt < 2:601751/140‑1 (MQ=255)
tAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCg > 2:2019154/1‑140 (MQ=255)
aaCACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGAc > 1:792348/1‑140 (MQ=255)
cacGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACtt > 2:261497/1‑139 (MQ=255)
cacGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTg > 1:1756609/1‑140 (MQ=255)
cacGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTg > 2:1084258/1‑140 (MQ=255)
cacGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTg > 1:2235664/1‑140 (MQ=255)
acGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGAc > 1:518441/1‑137 (MQ=255)
acGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTgg < 2:2235664/140‑1 (MQ=255)
ggATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCa < 1:2095505/140‑1 (MQ=255)
ggATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGAAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTAAATATTACGTCGTATTTGCCGGACTGGCa < 2:1204668/140‑1 (MQ=255)
aTCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGt > 1:2008398/1‑140 (MQ=255)
aTCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGt < 1:261497/140‑1 (MQ=255)
aTCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGt > 2:76163/1‑140 (MQ=255)
tGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATaaa < 1:1084258/140‑1 (MQ=255)
tATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCgt > 2:210186/1‑139 (MQ=255)
tATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGa > 1:1908218/1‑140 (MQ=255)
tCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGAtc > 1:1459240/1‑140 (MQ=255)
ccGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTcaca > 2:1930259/1‑140 (MQ=255)
ccGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTcaca > 2:2175956/1‑140 (MQ=255)
gCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAg < 1:1389052/140‑1 (MQ=255)
gCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAg < 1:429678/140‑1 (MQ=255)
acacCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCa < 2:1590965/140‑1 (MQ=255)
acacCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCa < 2:1610178/140‑1 (MQ=255)
acacCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCa < 2:1143101/140‑1 (MQ=255)
acacCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGAACTGGCAGTCGATAAAACCGATCTCACAAGCa < 2:466704/140‑1 (MQ=255)
ccTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCaaaa < 1:1055955/140‑1 (MQ=255)
ccTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCaaaa < 1:1930259/140‑1 (MQ=255)
cTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAg > 2:829457/1‑134 (MQ=255)
cTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAAt < 1:1825683/140‑1 (MQ=255)
aGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGaa < 1:1551833/140‑1 (MQ=255)
aCGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAatatt > 2:237129/1‑139 (MQ=255)
aCGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAatata > 2:1377649/1‑140 (MQ=255)
gggTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATc > 2:2201697/1‑140 (MQ=255)
gggTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATc > 2:1509953/1‑140 (MQ=255)
gggTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATc > 1:2453373/1‑140 (MQ=255)
tAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATcgcg > 1:1734273/1‑140 (MQ=255)
tAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATcgcg > 1:2358444/1‑140 (MQ=255)
aaaCGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCgcgc < 1:545295/140‑1 (MQ=255)
aCGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGccc > 2:529233/1‑140 (MQ=255)
gATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCgg < 1:2201697/140‑1 (MQ=255)
gATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCgg < 2:2281535/140‑1 (MQ=255)
tGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGgag > 1:1560486/1‑140 (MQ=255)
tGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGgag < 1:2117554/140‑1 (MQ=255)
gCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGgaga > 1:1141748/1‑140 (MQ=255)
cGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGaa > 2:233023/1‑140 (MQ=255)
cGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGaa > 2:1005416/1‑140 (MQ=255)
cGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGaa > 1:335728/1‑140 (MQ=255)
cGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGaa > 2:2141184/1‑140 (MQ=255)
cGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATAT‑ACCAAACTGAATATTACGTCGCATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAAc > 1:1624588/1‑140 (MQ=255)
tGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACa < 2:1570562/140‑1 (MQ=255)
ggAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACAt < 2:2358444/140‑1 (MQ=255)
aaaTCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATaa < 2:2029829/140‑1 (MQ=255)
aaCTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAg < 2:1009430/139‑1 (MQ=255)
tGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTa < 1:237129/140‑1 (MQ=255)
aaTTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCa > 2:1115797/1‑140 (MQ=255)
aTTTAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCAc < 1:2149360/140‑1 (MQ=255)
tttAAACGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTAACCACt > 1:1035016/1‑140 (MQ=255)
aaaCGTAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTcc > 1:916747/1‑140 (MQ=255)
tAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCAt < 2:1756609/140‑1 (MQ=255)
tAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCAt > 1:923388/1‑140 (MQ=255)
tAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCAt > 2:61607/1‑140 (MQ=255)
tAGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCAt < 1:2195008/140‑1 (MQ=255)
aGTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATc < 1:274648/140‑1 (MQ=255)
gTGACCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCt > 1:1762869/1‑140 (MQ=255)
aCCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGc > 1:557922/1‑140 (MQ=255)
aCCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGc > 1:428222/1‑140 (MQ=255)
aCCATTCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACGGTCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGc > 1:1967065/1‑140 (MQ=255)
ttCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGaa > 2:2510402/1‑140 (MQ=255)
tCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGTCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGaaa > 1:963652/1‑140 (MQ=255)
tCACTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGaaa > 1:862189/1‑140 (MQ=255)
aCTCAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGa < 1:1612906/140‑1 (MQ=255)
acAATATATATAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAAc < 2:923388/139‑1 (MQ=255)
atatatatAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGaa > 1:254167/1‑132 (MQ=255)
atatatatAACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGaa < 2:254167/132‑1 (MQ=255)
atatat‑aCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGaaa < 2:1624588/140‑1 (MQ=255)
tatataACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGaaa > 1:2086974/1‑140 (MQ=255)
atataACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAAt < 2:425594/140‑1 (MQ=255)
taACCAAACTGAATATTACGTCGTATTTGCCGGACTGTCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGAGGAAAGAACGTGAAATggg > 2:209325/1‑140 (MQ=255)
taACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATggg > 1:1503321/1‑140 (MQ=255)
taACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATggg > 2:169160/1‑140 (MQ=255)
taACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATggg < 2:557922/140‑1 (MQ=255)
taACCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATggg > 2:2508825/1‑140 (MQ=255)
aaCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGc < 2:157260/140‑1 (MQ=255)
aCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCt > 2:578427/1‑140 (MQ=255)
aCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCt < 2:428222/140‑1 (MQ=255)
aCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCt < 2:1908218/140‑1 (MQ=255)
aCCAAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCt < 1:2187873/140‑1 (MQ=255)
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TGCTAACGAGTTGACGCTGGTATTTAAAACACGGATCAAAATGTTTTATCGCCCCGCACACCTGAAGGGACGGGTAAACGATGCGTGGAAATCACTGGAATTTAAACGTAGTGACCATTCACTCAATATATATAACCCAACTGAATATTACGTCGTATTTGCCGGACTGGCAGTCGATAAAACCGATCTCACAAGCAAAATTGAATATATCGCGCCCGGAGAACATAAACAGTTACCACTTCCTGCATCTGGCGGAAAGAACGTGAAATGGGCT > NC_000913/3288458‑3288731
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
