Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F48 I1 R1
|
70 |
151.6 |
5072932 |
98.7% |
5006983 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,605,651 |
G→T |
intergenic (‑41/‑100) |
yhhM ← / → yhhN |
DUF2500 domain‑containing protein YhhM/conserved inner membrane enzyme YhhN |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,605,651 | 0 | G | T | 99.2%
| 442.8
/ NA
| 127 | intergenic (‑41/‑100) | yhhM/yhhN | DUF2500 domain‑containing protein YhhM/conserved inner membrane enzyme YhhN |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (66/60); minor base C (0/1); total (66/61) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 130 total aligned reads displayed.
TATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCA > NC_000913/3605514‑3605786
|
tATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTcc < 1:2225805/140‑1 (MQ=255)
tATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTcc < 1:1403279/140‑1 (MQ=255)
aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCa > 1:852268/1‑140 (MQ=255)
aTCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCa > 2:1216297/1‑140 (MQ=255)
aaGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGt < 2:1006090/139‑1 (MQ=255)
aGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGtt < 1:795228/140‑1 (MQ=255)
gCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTa < 1:13724/140‑1 (MQ=255)
cTTTTTCCCGTCGCTGTTGCTTAAAACGAAACGATGCAGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTAt > 2:719187/1‑140 (MQ=255)
cTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCGTCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTAt > 2:1700104/1‑140 (MQ=255)
cTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTAt > 1:1353207/1‑140 (MQ=255)
cTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTAt > 2:1642891/1‑140 (MQ=255)
cTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTAt > 1:1027390/1‑140 (MQ=255)
tttttCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATg < 2:2453131/140‑1 (MQ=255)
ttCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGgtg > 1:1278290/1‑140 (MQ=255)
gTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTc < 1:1277187/140‑1 (MQ=255)
tCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCa > 2:2391180/1‑140 (MQ=255)
tCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCa < 1:2081102/140‑1 (MQ=255)
cGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCAt < 2:1463189/140‑1 (MQ=255)
tAAAAAGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCAccc > 2:1644202/1‑140 (MQ=255)
aaaaCGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCt < 1:2300278/140‑1 (MQ=255)
aaaaCGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCt < 2:1479168/140‑1 (MQ=255)
aaaaCGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCt < 2:1809062/140‑1 (MQ=255)
aacgaaacgaTGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCg > 1:2033408/1‑140 (MQ=255)
aaacgaTGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCAc < 1:1419585/140‑1 (MQ=255)
aacgaTGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACt > 1:352040/1‑140 (MQ=255)
acgaTGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTa < 1:294392/140‑1 (MQ=255)
gaTGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTaaa < 1:504618/140‑1 (MQ=255)
tGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACt > 1:1817262/1‑140 (MQ=255)
cgacgaCAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCCCCCTCGCCACTAAACTGGAAg < 2:1353207/140‑1 (MQ=255)
cgacgaCAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAg < 1:646968/140‑1 (MQ=255)
gacgacAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGc < 2:2156029/140‑1 (MQ=255)
acgtcAATTAAGCAAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCa < 2:940564/140‑1 (MQ=255)
acgacAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCa < 1:987993/140‑1 (MQ=255)
acAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGa > 1:86380/1‑140 (MQ=255)
cAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCCCCCTCGCCACTAAACTGGAAGCAAGAc < 2:1128755/140‑1 (MQ=255)
aTTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGAAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCg < 2:1406643/140‑1 (MQ=255)
aTGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTc > 1:2189280/1‑140 (MQ=255)
aTGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTc > 1:223294/1‑140 (MQ=255)
aaCAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCtt > 2:2510116/1‑140 (MQ=255)
aCAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTa > 1:1941270/1‑140 (MQ=255)
cAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTAc > 2:510777/1‑140 (MQ=255)
agagGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAAc < 2:1941270/140‑1 (MQ=255)
agagGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAAc > 1:1483312/1‑140 (MQ=255)
agagGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAAc > 2:2161596/1‑140 (MQ=255)
agagGTGGTTTGCTCATCGTTATCCCTCATCGGAAAATGAGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAAc > 1:2291330/1‑140 (MQ=255)
gagGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACg < 1:1605540/140‑1 (MQ=255)
aagGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACg < 2:852268/139‑1 (MQ=255)
agGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGa < 1:669462/140‑1 (MQ=255)
agGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGa < 2:835171/140‑1 (MQ=255)
agGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGa < 1:1863900/140‑1 (MQ=255)
agGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGa < 1:1976019/140‑1 (MQ=255)
agGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGa > 2:248245/1‑140 (MQ=255)
ggaggtTTGCTCATCTTTATCCCTCATCGAAAAATGCGCAAATAAAAATACACTTCAAGTTACGCTGTTGTCATCCGTCCCCCCTCGCCACTAAACTCGAAGCAAGACCGTAGGCATCCCGCTTACGAAAAAATAACGaa < 2:1872503/137‑1 (MQ=255)
gtTTGCTCCTCTTTCTCCCTCATCGGAAAATGCGGTAATCAGCATACCCTTCCAGTT‑TAGTGGCGAGGGTGGACGGCTGACACCACTAAACTGGCAGCCAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCaa > 1:598892/1‑140 (MQ=12)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa > 2:46607/1‑140 (MQ=255)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa < 1:1159804/140‑1 (MQ=255)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa > 1:1684936/1‑140 (MQ=255)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa > 1:1171458/1‑140 (MQ=255)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa > 2:1135666/1‑140 (MQ=255)
gtTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCATCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCa < 2:1156341/140‑1 (MQ=255)
tGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAgg < 2:393366/140‑1 (MQ=255)
tGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAgg < 2:1483312/140‑1 (MQ=255)
tGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAgg < 1:46607/140‑1 (MQ=255)
cTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGaa > 2:1919116/1‑140 (MQ=255)
cTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGaa < 2:1027390/140‑1 (MQ=255)
cTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAg > 2:601900/1‑140 (MQ=255)
cTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAg > 2:791511/1‑140 (MQ=255)
cTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAg > 2:1692103/1‑140 (MQ=255)
tATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATg > 2:128610/1‑140 (MQ=255)
aTCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGc < 2:1171458/140‑1 (MQ=255)
tCCCTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCt > 2:809678/1‑140 (MQ=255)
cccTCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCtt < 1:1216297/140‑1 (MQ=255)
tCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTgg < 2:2291330/140‑1 (MQ=255)
tCATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTgg < 2:1962963/140‑1 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 1:2533464/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 2:1011954/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 1:550913/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 2:2056501/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 1:2407760/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 2:1358176/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 2:1150162/1‑140 (MQ=255)
cATCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGt > 2:160830/1‑140 (MQ=255)
aTCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAgg < 2:2067774/122‑1 (MQ=255)
aTCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAgg > 1:2067774/1‑122 (MQ=255)
aTCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTc > 1:2327213/1‑140 (MQ=255)
aTCGGAAAATGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTc > 1:2484261/1‑140 (MQ=255)
aaaTGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTAt < 1:1049472/140‑1 (MQ=255)
aTGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCg < 2:2327213/140‑1 (MQ=255)
aTGCGGAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCg < 2:1764197/140‑1 (MQ=255)
gCGGAAATAAGCATACCCTCCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGct < 1:2437011/140‑1 (MQ=255)
ggAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACG‑AAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGctgtc < 2:210731/140‑1 (MQ=255)
gAAATAAGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGctgtc > 2:2390713/1‑140 (MQ=255)
aaGCATTCCCTTCCAGTTATGGTGTTGACAGCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAACGAACTAAGATGCTTTGGTCGTTTATCGCTgtctgtct < 2:1684936/140‑1 (MQ=255)
aaGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTgtctgtct < 2:2407760/140‑1 (MQ=255)
aaGCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTgtctgtct < 1:2390713/140‑1 (MQ=255)
gCATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCttt < 2:1817262/140‑1 (MQ=255)
cATACCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTc > 1:1425591/1‑140 (MQ=255)
aCCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGc < 1:1692103/140‑1 (MQ=255)
aCCCTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGc > 2:1496338/1‑140 (MQ=255)
cccTTCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCa < 1:1700104/140‑1 (MQ=255)
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TATCAGCTTTTTCCCGTCGCTGTTGCATAAAACGAAACGATGCGGCGACGACAATTAAGCCAATGATAACAATAAAGAAAAGAGGTGGTTTGCTCATCTTTATCCCTCATCGGAAAATGCGGAAATAAGCATACCCTGCCAGTTATGGTGTTGTCATCCGTCCACCCTCGCCACTAAACTGGAAGCAAGACCGTAGGCATTCCGCTTACGAAAAAATAACGAATTCAAGGAACTAAGATGCTTTGGTCGTTTATCGCTGTCTGTCTTTCCGCA > NC_000913/3605514‑3605786
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
