Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F48 I1 R1
|
70 |
151.6 |
5072932 |
98.7% |
5006983 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,393,493 |
C→A |
G192V (GGA→GTA) |
queG ← |
epoxyqueuosine reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,393,493 | 0 | C | A | 100.0%
| 522.1
/ NA
| 147 | G192V (GGA→GTA) | queG | epoxyqueuosine reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (90/57); total (90/57) |
Only 100 of 151 total aligned reads displayed.
ACGGTCGCAACTCTTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATCCTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAGCTAAC > NC_000913/4393356‑4393627
|
aCGGTCGCAACTCTTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGGTAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCAtact > 1:844760/1‑140 (MQ=255)
cGCAACTCTTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTc > 2:16139/1‑140 (MQ=255)
cAACTCTTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGa > 2:1028093/1‑140 (MQ=255)
ctTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGt > 1:644707/1‑140 (MQ=255)
ctTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGt > 1:272563/1‑140 (MQ=255)
ttCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGtt > 1:2515276/1‑140 (MQ=255)
ttCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGtt > 1:1774264/1‑140 (MQ=255)
aTCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCAc > 1:457479/1‑140 (MQ=255)
tCGCCCCTTCAAGTTCGGTGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACg < 1:1444879/140‑1 (MQ=255)
tCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACg < 2:844760/140‑1 (MQ=255)
tCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACg < 1:1541145/140‑1 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCGTACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg < 2:2012752/140‑1 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg < 1:328643/140‑1 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg > 1:377709/1‑140 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg > 1:1871055/1‑140 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg > 1:698813/1‑140 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg > 2:1414096/1‑140 (MQ=255)
gCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACggg > 1:1184074/1‑140 (MQ=255)
cTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGc < 2:2142097/140‑1 (MQ=255)
cGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCTGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCg > 1:1143944/1‑140 (MQ=255)
cGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGAAGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCg < 2:1199722/140‑1 (MQ=255)
agaTAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGTACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCat > 2:2015916/1‑139 (MQ=255)
agagATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGc < 2:60733/140‑1 (MQ=255)
tACAGCGGCGAGCATCGACGGTATATGGTTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTaaa < 1:1224573/140‑1 (MQ=255)
aCAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTaaaa > 2:362209/1‑140 (MQ=255)
cggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaa > 2:224023/1‑140 (MQ=255)
cggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaa > 1:727715/1‑140 (MQ=255)
cggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaa > 2:1344391/1‑140 (MQ=255)
ggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaag < 2:1871055/140‑1 (MQ=255)
ggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaag < 1:1028093/140‑1 (MQ=255)
ggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaag > 1:1475947/1‑140 (MQ=255)
ggcgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAaagaag > 1:2235351/1‑140 (MQ=255)
ggAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAgaagaa < 1:2076590/139‑1 (MQ=255)
cgAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAgaagaa > 1:499527/1‑140 (MQ=255)
gAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAgaac > 2:46423/1‑140 (MQ=255)
aGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAgaacg > 2:1878620/1‑140 (MQ=255)
aGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAgaacg > 1:900200/1‑140 (MQ=255)
aGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAgaacg > 2:1752605/1‑140 (MQ=255)
aGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAgaacg > 1:2034333/1‑140 (MQ=255)
tataTGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTcg < 1:1344391/140‑1 (MQ=255)
atGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGa < 2:727715/140‑1 (MQ=255)
ggCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt < 2:1940426/140‑1 (MQ=255)
ggCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt < 2:2526907/140‑1 (MQ=255)
ggCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt < 2:2186600/140‑1 (MQ=255)
ggCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt < 1:396618/140‑1 (MQ=255)
ggCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtc > 1:1077219/1‑139 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTgt > 2:1898552/1‑139 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGa > 2:1223627/1‑140 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGa < 1:1752605/140‑1 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGa > 1:2173953/1‑140 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGa > 2:1163612/1‑140 (MQ=255)
cTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCATCGCGATTGa > 1:1164997/1‑140 (MQ=255)
tCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAg > 2:1990161/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 1:84087/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:198537/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:109352/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:684840/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:479658/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:2252052/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:2293643/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 1:2267989/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGa > 2:2447387/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGAAATTCGCCTAATAAGAAGAACGAACCGGCCTCGCCATTGACGa > 2:431014/1‑140 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGAATGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt < 1:887369/135‑1 (MQ=255)
gacgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGAATGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGAtt > 2:887369/1‑135 (MQ=255)
cgaTGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATa > 1:47764/1‑140 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 2:511242/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 2:499527/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 2:377709/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 1:1044284/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 1:16139/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 1:1887964/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagt < 1:2121719/140‑1 (MQ=255)
tGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACAAGCAATTCGCCTAAAAAGAAGAACGGACCGGCCTCGCGATTGAGGATAagt < 1:2132513/140‑1 (MQ=255)
ggCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagtg > 1:1836520/1‑140 (MQ=255)
cACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagtgag < 2:2034333/140‑1 (MQ=255)
ccGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAagtgagtg < 1:1223627/140‑1 (MQ=255)
gTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCtt > 1:1541614/1‑140 (MQ=255)
cGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTAc < 1:2480528/140‑1 (MQ=255)
ggCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCt > 1:773911/1‑140 (MQ=255)
ggCAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCt > 1:2205563/1‑140 (MQ=255)
cAAATCGTCATACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGt > 1:1828910/1‑140 (MQ=255)
aTACAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAg > 2:1417328/1‑140 (MQ=255)
aCAGGCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGcc < 2:1836520/140‑1 (MQ=255)
ggCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAg < 2:1828910/140‑1 (MQ=255)
ggCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAg > 2:2421010/1‑140 (MQ=255)
gCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGc > 2:409876/1‑140 (MQ=255)
gCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGc > 1:2304637/1‑140 (MQ=255)
gCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGc > 1:2379794/1‑140 (MQ=255)
gCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGc > 1:176598/1‑140 (MQ=255)
gCCACGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGc > 2:2213367/1‑140 (MQ=255)
cACGCATTTGCCGCATACTTCCTCGACTGGATGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGATCGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGGCCAGCCGAGCCCAGCtt > 1:1928511/1‑140 (MQ=255)
aCGCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCttt > 2:1349303/1‑140 (MQ=255)
gCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCttttt < 1:2252052/140‑1 (MQ=255)
gCATTTGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCttttt < 1:2437157/140‑1 (MQ=255)
tttGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAg < 2:900200/140‑1 (MQ=255)
tGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGTCGAGCCCAGCTTTTTCAGCt > 2:724033/1‑140 (MQ=255)
tGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAGCt > 1:1972727/1‑140 (MQ=255)
tGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAGCt > 1:492845/1‑140 (MQ=255)
tGCCGCATACTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAGCt > 1:132722/1‑140 (MQ=255)
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ACGGTCGCAACTCTTCCGGGATCGCCCCTTCAAGTTCGATGGTGAGATAAGAGATACAGCGGCGAGCATCGACGGTATATGGCTCGACGATGGCACCGGTCGGGCAAATCGTCATACAGGCCACGCATTTGCCGCATCCTTCCTCGACTGGTTGATCCACGGGCAGCGGAATATCGACCAGCAATTCGCCTAAAAAGAAGAACGAACCGGCCTCGCGATTGAGGATAAGTGAGTGCTTACCTGTCCAGCCGAGCCCAGCTTTTTCAGCTAAC > NC_000913/4393356‑4393627
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
