Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F13 I1 R1
|
185 |
260.8 |
12342668 |
99.6% |
12293297 |
98.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,977,660 |
A→C |
L414V (TTA→GTA) |
lysA ← |
diaminopimelate decarboxylase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,977,660 | 0 | A | C | 100.0%
| 1060.4
/ NA
| 255 | L414V (TTA→GTA) | lysA | diaminopimelate decarboxylase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (122/133); total (122/133) |
Only 100 of 259 total aligned reads displayed.
ACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATT > NC_000913/2977562‑2977757
|
aCGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACtt < 1:3854006/101‑1 (MQ=255)
cGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACttc < 2:3853949/101‑1 (MQ=255)
gCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACttct > 1:3854402/1‑101 (MQ=255)
cTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTActtctt > 2:3854403/1‑101 (MQ=255)
cTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTActtctt < 2:3853968/101‑1 (MQ=255)
ggTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCg < 2:3853836/101‑1 (MQ=255)
ggTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCg > 2:3854409/1‑101 (MQ=255)
gTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGa < 1:3853779/101‑1 (MQ=255)
tACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGAt < 1:3853882/101‑1 (MQ=255)
tACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGAt < 1:3853963/101‑1 (MQ=255)
tACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGAt < 2:3854126/101‑1 (MQ=255)
tACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGAt > 1:3854410/1‑101 (MQ=255)
aCGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATg < 2:3853986/101‑1 (MQ=255)
tcgtcATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTc > 1:3854412/1‑101 (MQ=255)
cgtcATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCt < 2:3854131/101‑1 (MQ=255)
tcATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTgg > 2:3854418/1‑101 (MQ=255)
tcATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTgg > 1:3854417/1‑101 (MQ=255)
tcATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTgg > 2:3854421/1‑101 (MQ=255)
cATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGc > 1:3854422/1‑101 (MQ=255)
ttCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGa < 2:3854038/101‑1 (MQ=255)
tCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGAc < 2:3854002/101‑1 (MQ=255)
aGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGa < 2:3853893/98‑1 (MQ=255)
aGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACgg < 1:3854064/101‑1 (MQ=255)
aGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACgg < 1:3854210/101‑1 (MQ=255)
gtgtCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGc > 1:3854425/1‑101 (MQ=255)
cAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAAt > 1:3854428/1‑101 (MQ=255)
cAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAAt < 1:3854024/101‑1 (MQ=255)
aaCTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATc < 2:3853906/101‑1 (MQ=255)
aaCTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATc < 2:3854135/101‑1 (MQ=255)
aCTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACg > 1:3854431/1‑93 (MQ=255)
aCTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCa < 2:3854192/101‑1 (MQ=255)
cTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAAt < 2:3854111/98‑1 (MQ=255)
ccGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAAcc < 2:3854076/101‑1 (MQ=255)
cGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAAc < 1:3854147/99‑1 (MQ=255)
tCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACcgcg < 2:3854308/101‑1 (MQ=255)
cGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCgcgc > 2:3854434/1‑101 (MQ=255)
cTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCt > 1:3854436/1‑101 (MQ=255)
tGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTg < 1:3853863/101‑1 (MQ=255)
tGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTg < 1:3853948/101‑1 (MQ=255)
ggAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGa > 2:3854439/1‑101 (MQ=255)
ggAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGa > 1:3854440/1‑101 (MQ=255)
aGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGAcc < 1:3854073/101‑1 (MQ=255)
ggCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCgcgc < 1:3853995/94‑1 (MQ=255)
gCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCAt < 2:3854012/101‑1 (MQ=255)
gCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCAt > 2:3854445/1‑101 (MQ=255)
cAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCAtt < 1:3854117/101‑1 (MQ=255)
aaGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTa > 2:3854447/1‑101 (MQ=255)
gTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATc > 2:3854450/1‑101 (MQ=255)
tcatcaTGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCa > 1:3854451/1‑101 (MQ=255)
atcatGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCt < 2:3854158/64‑1 (MQ=255)
atcatGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCaaa > 1:3854456/1‑101 (MQ=255)
tcatGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGaa > 2:3854457/1‑75 (MQ=255)
catGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACa > 2:3854459/1‑101 (MQ=255)
atGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAg > 1:3854462/1‑101 (MQ=255)
atGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAg < 2:3854113/101‑1 (MQ=255)
tGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGa < 2:3854029/101‑1 (MQ=255)
ccAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTc > 2:3854466/1‑101 (MQ=255)
cAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCt > 1:3854468/1‑101 (MQ=255)
cAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCt < 1:3853972/101‑1 (MQ=255)
aGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTg > 2:3854472/1‑101 (MQ=255)
aGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTg > 1:3854474/1‑101 (MQ=255)
aGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTg > 1:3854470/1‑101 (MQ=255)
gACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTa > 2:3854477/1‑101 (MQ=255)
aCTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTaa < 1:3854250/101‑1 (MQ=255)
aCTAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTaa < 2:3854053/101‑1 (MQ=255)
tAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACa > 2:3854482/1‑101 (MQ=255)
tAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACa > 1:3854480/1‑101 (MQ=255)
tAACCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACa < 1:3854331/101‑1 (MQ=255)
aaCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAg > 2:3854486/1‑101 (MQ=255)
aCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGc > 2:3854489/1‑101 (MQ=255)
aCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGc > 2:3854491/1‑101 (MQ=255)
aCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGc < 1:3854039/101‑1 (MQ=255)
aCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGc < 1:3854051/101‑1 (MQ=255)
aCCGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGc < 2:3853916/101‑1 (MQ=255)
ccGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCg < 2:3854093/101‑1 (MQ=255)
ccGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCg > 1:3854492/1‑101 (MQ=255)
cGCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCgg < 1:3854291/101‑1 (MQ=255)
gCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGa < 2:3854169/101‑1 (MQ=255)
gCAGTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGa < 1:3854086/101‑1 (MQ=255)
gTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACgg > 1:3854498/1‑101 (MQ=255)
gTTAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACgg > 2:3854497/1‑101 (MQ=255)
ttAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGc > 1:3854501/1‑101 (MQ=255)
tAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCt < 1:3854031/101‑1 (MQ=255)
tAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCt < 1:3854048/101‑1 (MQ=255)
tAAAGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCt < 1:3854162/101‑1 (MQ=255)
aaGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTAt > 2:3854505/1‑101 (MQ=255)
aaGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTAt < 1:3854236/101‑1 (MQ=255)
aaGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTAt < 1:3854159/101‑1 (MQ=255)
aGCAATTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTAtt > 1:3854506/1‑101 (MQ=255)
aaTTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTa > 2:3854508/1‑101 (MQ=255)
aTTCCAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAg > 2:3854511/1‑101 (MQ=255)
ccAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTg > 2:3854514/1‑101 (MQ=255)
cAGCGCCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTgg > 1:3854515/1‑101 (MQ=255)
gcgcCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGAt > 2:3854518/1‑101 (MQ=255)
gcgcCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGAt < 2:3854217/101‑1 (MQ=255)
gcgcCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGAt < 1:3854193/101‑1 (MQ=255)
gcgcCAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGAt < 1:3854092/101‑1 (MQ=255)
ccAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTa > 1:3854522/1‑72 (MQ=255)
cAGTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACa < 2:3854228/101‑1 (MQ=255)
gTACTTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACAtt < 1:3853919/101‑1 (MQ=255)
|
ACGCTGGTACGTCGTCATTCAGTGTCAACTCCGTCGCTGGAGGCAAGTCATCATGCAACCAGCGACTAACCGCAGTTAAAGCAATTCCAGCGCCAGTAATTCTTCGATGGTCTGGCGACGGCGAATCAACCGCGCCTGACCATTATCAAACAGAACTTCTGGTAACAGCGGACGGCTATTGTAGTTGGATGACATT > NC_000913/2977562‑2977757
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
