Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F48 I1 R1
|
14 |
80.1 |
2614210 |
97.0% |
2535783 |
148.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,633,634 |
C→T |
E38K (GAG→AAG) |
yjjX ← |
non‑canonical purine NTP phosphatase, ITPase/XTPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,633,634 | 0 | C | T | 98.4%
| 188.8
/ NA
| 63 | E38K (GAG→AAG) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (34/27); minor base G (1/0); total (35/28) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
ACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCA > NC_000913/4633488‑4633779
|
aCTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGa < 1:806790/149‑1 (MQ=255)
cTGAAAGTGCTGTCACCATCGATGCCAGCTTCAAACGCCACCCAAAACTCAGCCTCTCGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGAc < 1:1264253/149‑1 (MQ=255)
gAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACgg > 1:866926/1‑149 (MQ=255)
aaaGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACAGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGc > 1:59595/1‑149 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACgatg > 1:570334/1‑146 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAt < 1:272952/149‑1 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAt < 2:394610/149‑1 (MQ=255)
gTCACCATCGATGCCAGCTTCAATCGCCCCCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACCCCGCTCTTGACGGCAAAGGATg > 1:59923/1‑149 (MQ=255)
aCCGTCGATGCCAGCTTCAATCGCCACCAAAAGCTCACCCGCTGGAACTACAGGGCGGGGATTGGCTACCCGATTTCGTGCGACAGGGCGCGGTTCCTAACAGCCAAAGGGCTGTTCCGCTACTCCGCTCTTGACGGCAACGGATGCaa < 1:843661/149‑1 (MQ=255)
tCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATg < 1:1174802/149‑1 (MQ=255)
gCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCACCGGCTGCAATATGGCAgg > 2:240154/1‑149 (MQ=255)
cAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCCCTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAAGATGGCAGGAt > 1:1129056/1‑149 (MQ=255)
cAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCCCTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGAAATATGGCAGGaa > 2:66656/1‑148 (MQ=255)
ttCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCtt > 1:600495/1‑149 (MQ=255)
ttCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAGGCAATATGGCAGGATCCtt > 1:424507/1‑149 (MQ=255)
aaTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGAAATATGGCAGGATCCTTCGc > 2:900550/1‑149 (MQ=255)
aaTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTGGACGGCAACGGATGCAATATGGCAGGATCCTTCGc > 1:895801/1‑149 (MQ=255)
aTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGcc < 2:211873/149‑1 (MQ=255)
cGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCATTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAGGCAATATGGCAGGATCCTTCGCCGa > 1:31276/1‑149 (MQ=255)
gCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCAGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGaa > 1:1188733/1‑149 (MQ=255)
ccAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAtct > 1:58052/1‑149 (MQ=255)
cAAAAATCAGCCTCTGGAAGTAAACATCGGGCATTGGCTACCCGTTTTCGTGCGCCAGAGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGGACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAtctc < 2:1159530/149‑1 (MQ=255)
aaaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCg > 2:439850/1‑149 (MQ=255)
aaaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCg > 1:797247/1‑149 (MQ=255)
ccTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGcc > 1:1104051/1‑149 (MQ=255)
cgcttgAATTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCt < 2:1200885/144‑1 (MQ=255)
ctGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGc < 1:439850/149‑1 (MQ=255)
gAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGa > 2:343131/1‑149 (MQ=255)
aGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAAt < 2:690446/149‑1 (MQ=255)
gTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATg < 1:744775/149‑1 (MQ=255)
aaaCGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGc < 2:578607/149‑1 (MQ=255)
aCGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGTTCTCGTGAAATGCCTGCAGAATGGCCt < 1:7954/149‑1 (MQ=255)
ggcggGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGa > 2:220403/1‑149 (MQ=255)
cggGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAAt < 1:382238/149‑1 (MQ=255)
cATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGCAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATGTTa > 2:810232/1‑149 (MQ=255)
cATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTa < 1:1102219/149‑1 (MQ=255)
ttGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGc < 1:326595/149‑1 (MQ=255)
ccGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCTGGATtgg > 1:893328/1‑149 (MQ=255)
cGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTTCAGAATGGCCTGAATTTTAGCGGGATtggt > 1:575578/1‑149 (MQ=255)
gaaacgcgcgcCGGCGCACGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACCCCGCTCTTGACGGCAACGGATGCAATCTGGCAGGCTCCTTCGCGGAAGAGCTCGTGAACTGCCTGCAGAATGGCCTGAATTTTAGCGGGATtggggg > 1:1222428/8‑149 (MQ=255)
tttCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCGGCAGAATGGCCTGAATTTTAGCGGGATTggtggt > 1:672830/1‑149 (MQ=255)
gcgcgcGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTAGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCGTGAATTTTAGCGGGATTGGTGGTCGCACAGACAAc > 2:1262603/1‑149 (MQ=255)
gcgcgcGGTTCCTCACTGCCACAGGGCTGTTCGGGTACACCGCACTTGACGGCAACTGATGCAATATGGCAGGATCCTTCGCCGAATATCTCGTGAACTGCCTGCAGAATGGCCTGAATTTTAGCGGGCTTGGTGGTCGCACAGACAAc < 2:859751/149‑1 (MQ=255)
gcgTTTCCTCACTGCCCAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATACTTCGCCGAAGATCTCGTGAACTGCCTGCAGAATGGCCTGAATTTTAGCGGTATTGGTGGTCGCACAGACAACTTgg < 2:371242/149‑1 (MQ=255)
gTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAGTTTTAGCGGGATTGGTGGTCGCACAGCCAACTTGGTg > 2:261339/1‑149 (MQ=255)
gTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTg > 2:787802/1‑149 (MQ=255)
gTTTCCTCACTGCAAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAAGCAATATGGCAGGATCCTTAGCCGCAGATCTCATGAAATGCATGAATAATTGCCTTAATTTTAGCTGGTATGGTGGTCTCACAGACAACttgttg > 1:697192/1‑149 (MQ=255)
ccTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATa < 1:918947/149‑1 (MQ=255)
tCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAAt < 1:987953/149‑1 (MQ=255)
tCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCGACGCCGAAGATCTAGTGACATGCCTTCAGAATGGCCTGAAATTTAGCGGGATTGGAGGTCGAACAGACAACTTGGTGCATAAt > 2:1206005/1‑149 (MQ=255)
cACTGCCAATGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGATATGCCTGCAGAATGGCCTGAATTTTTGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATc < 2:59595/149‑1 (MQ=255)
cACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATc < 1:208214/149‑1 (MQ=255)
aCTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCa > 2:673158/1‑149 (MQ=255)
aaaGGGCTGTTCCGGTACACCGCTCTTGACGACAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTa > 2:80286/1‑149 (MQ=255)
aaGGGCTGTTCCGGTACACCGCTCTAGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGACTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTAc < 2:666472/149‑1 (MQ=255)
aGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCATCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACt < 2:600495/149‑1 (MQ=255)
gggCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTc < 2:58052/149‑1 (MQ=255)
cTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGa > 1:853366/1‑149 (MQ=255)
tCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAAt < 2:388213/149‑1 (MQ=255)
ggTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTaa < 2:19232/149‑1 (MQ=255)
gTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCTGAATGGCCTGAATTTTAGCGTGATTGGTGGTCGCACAGACAAATTGGTTCATAATCAGCATTACTCTGAAAATTaaa > 2:550304/1‑148 (MQ=255)
acCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTa > 1:194294/1‑149 (MQ=255)
acCGCTCTTGACGGCAACGGATGCAATATCGCACGATCCTTCGCCGAAGATCTCGTGAAATGCCTCCAGCATGGCCTGAATTTTAGGGGGATTGGTGGACGCACAGCCAAGTTGGTGCATAATCTGCATTAGTCAGAAAATGAACGttc > 1:900471/1‑148 (MQ=255)
tcttGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGAAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAcagca < 2:1188733/149‑1 (MQ=255)
|
ACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCA > NC_000913/4633488‑4633779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
