Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F48 I0 R1
|
217 |
96.9 |
3144200 |
97.2% |
3056162 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,633,634 |
C→T |
100% |
E38K (GAG→AAG) |
yjjX ← |
non‑canonical purine NTP phosphatase, ITPase/XTPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,633,634 | 0 | C | T | 100.0%
| 309.8
/ ‑6.7
| 104 | E38K (GAG→AAG) | yjjX | non‑canonical purine NTP phosphatase, ITPase/XTPase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (51/51); minor base G (1/1); total (52/52) |
| Rejected as polymorphism: E-value score below prediction cutoff. |
| Rejected as polymorphism: Frequency below/above cutoff threshold. |
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. |
Only 100 of 104 total aligned reads displayed.
ACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGC > NC_000913/4633488‑4633778
|
aCTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGa < 2:702727/149‑1 (MQ=255)
aCTGAAAGTGCTGTCACCATCGATGCCACCTTCAATCGCCACCCAAAAATCAGCCGCTGGAAGTATACGGCGGGCATTGGCTACCCGATTTCGTGAGCCAGCGCGCGTTTCCTCACTGCCAACGGGCTGTTCCGGTACACCGCTCTTGa < 2:1019772/149‑1 (MQ=255)
atGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGAc < 2:875267/148‑1 (MQ=255)
tGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACg < 2:875927/149‑1 (MQ=255)
gAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCGCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACgg < 1:892695/149‑1 (MQ=255)
aaaGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAACATCAGCCTCTGGTAGTAACCGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGATGCGTCACTGCCAAAGGGCTGTTCCGGTAGCCCGATCTTGACGGc > 2:1318002/1‑149 (MQ=255)
ccgcccgTCACCATCCATTCCATCTTCCCCCGCCACGCAATAATCATCCTCTGGACGTATACGGCGGGCATTTGCTACCCGAATTCGTGCGCTTGCGCGCGTTTCCTCACTGCCAAAGCGCTGTTCCGTTACACCGCTCTTGACGGCat < 2:1084644/143‑2 (MQ=255)
aGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGAAAACGGCGGGCATTGGCTACCCGCTTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCac > 2:922667/1‑148 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAt > 1:798126/1‑149 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAt > 2:588239/1‑149 (MQ=255)
tGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAt > 2:24168/1‑149 (MQ=255)
tCACAATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGc > 2:1388956/1‑149 (MQ=255)
gcACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGc < 2:1415141/148‑1 (MQ=255)
caacATCCATGCCAGCTTAAATCGCCACCAAAAAATCAGCCTCTTGAAGTAAACGGCGGGCATTGTCTACACGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCTGTACACCGCTCTTGACGGCAACGGATGCa < 2:1510838/146‑1 (MQ=255)
cATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCCCCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCAGGTACACCGCTCTTGACGGCAACGGATGCAata > 1:284861/1‑149 (MQ=255)
cATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAata < 2:578772/149‑1 (MQ=255)
aTCGATGCCAGCTTCCATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTCCCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAatat > 2:1106350/1‑149 (MQ=255)
gATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGc < 2:458050/149‑1 (MQ=255)
ttGCAAGCTTAAATCGCCACCGAAATATCAGGCTCTGGAAGTTCACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAATGGCTGTTCCGGTACACCTCTCTTGACGGCAACGGATGCAATATGGCa < 1:855197/148‑1 (MQ=255)
ctGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCa < 1:401549/148‑1 (MQ=255)
aTGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCa > 1:1360361/1‑149 (MQ=255)
aGCGTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATc < 1:1204905/149‑1 (MQ=255)
ttCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTGCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCtt < 2:1433252/149‑1 (MQ=255)
aaTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGc < 1:237037/149‑1 (MQ=255)
aaTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGc > 2:803220/1‑149 (MQ=255)
aaTCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCGTCGc > 2:809883/1‑149 (MQ=255)
tCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCg > 1:462786/1‑149 (MQ=255)
gCCCCCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCGACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATCTGGCAGGATCCTTCGCCGaa > 1:1409671/1‑149 (MQ=255)
gCCACCCAAAAATCAGCCTCTGGAAGTAACCGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCATAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGaa < 2:1214085/149‑1 (MQ=255)
aCCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAt > 2:743669/1‑149 (MQ=255)
cccAAAAATCACCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAtc < 1:326934/149‑1 (MQ=255)
ccAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAtct > 2:1557145/1‑149 (MQ=255)
cAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGAtctc > 2:609042/1‑149 (MQ=255)
cAAAAAGCAGCCTCTGGAAGTAAACGGCGGTCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGAGGCAATATGGCAGGATCCTTCGCCGAAGAtctc < 1:750601/149‑1 (MQ=255)
aaaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCATTCGCCGAAGATCTCg > 2:273639/1‑149 (MQ=255)
aaaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGACAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTACGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCg > 1:520675/1‑149 (MQ=255)
aaaaaTCAGCCTCGGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTGCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGCCGGCACCGGCTGCAAGATGGCAGGATCCTTCGCCGCAGATcgcg > 1:1305054/1‑149 (MQ=255)
aaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGt < 1:91475/149‑1 (MQ=255)
aaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGt < 2:1545326/149‑1 (MQ=255)
aaaaTCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGt < 2:917170/149‑1 (MQ=255)
caTCAGCCGCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTATCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGa < 2:512124/148‑1 (MQ=255)
cAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAAt < 1:921703/149‑1 (MQ=255)
gCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCATGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGc > 2:7551/1‑149 (MQ=255)
ccTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGcc > 1:1491968/1‑149 (MQ=255)
tctGGAAGTAATCGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACCCCGCTCTTGACGGCAACGGATGCAATTTGGCAGGATCCTTCGCCGAACATCTCGTGAAATGCCTg > 1:862290/1‑149 (MQ=255)
tctGGAAGTAAACGGCGGGCATTGGCTCCCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGAAGGATCCTTCGCCGAAGATCTCTTGAAATGCCTg > 1:940128/1‑149 (MQ=255)
tctGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTg < 2:521590/149‑1 (MQ=255)
ctGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGc > 1:884774/1‑149 (MQ=255)
ctGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCGCTTGACGGAAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGc < 2:171579/149‑1 (MQ=255)
tGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCa < 1:948285/149‑1 (MQ=255)
gAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGa > 2:619282/1‑149 (MQ=255)
aaaCGGCGGGCATTGGCTACCCGATTTCGGGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGc < 1:353895/149‑1 (MQ=255)
gcggGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGaa < 1:1554968/149‑1 (MQ=255)
gcggGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGaa < 1:363872/149‑1 (MQ=255)
gcggGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGaa > 1:468397/1‑149 (MQ=255)
gggCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCGTCACTGACAAAGGGCTGTTCCGGTACACCTCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGGCTGCAGAATGGCCTGAAtt < 1:1416475/149‑1 (MQ=255)
cATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGCATTTTa > 2:56294/1‑149 (MQ=255)
cATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTa < 1:24168/149‑1 (MQ=255)
tGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCGGGATCATTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCg < 1:92677/149‑1 (MQ=255)
ggCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCgg > 1:45585/1‑149 (MQ=255)
ccGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCATAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGCTGCAATATGGCAGGATCCTTCGCCGAAGCTCTCGTGAAAAGCCTGCAGAATGGCCTGAATTTTAGCGGGATggg > 1:1501393/1‑149 (MQ=255)
ccGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATtgg < 1:745586/149‑1 (MQ=255)
ccGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATtgg < 1:855904/149‑1 (MQ=255)
ccGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGATCTTGCCGGCCACGGATGGATTATGGCAGGCTCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGCATGGCCTGAATTTTAGCGGGTTtgg > 1:321662/1‑149 (MQ=255)
cGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATtggt > 1:216309/1‑149 (MQ=255)
ttCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTc < 1:1388956/149‑1 (MQ=255)
gTGCGCCAGCGCGCGTTTCCTCACTGCCACAGGGCTGTTCCGGTTCACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGATTTTTAGCGGGATTGGTGGTCGca < 2:515507/149‑1 (MQ=255)
gTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGca > 1:1341314/1‑149 (MQ=255)
gTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGca > 1:189939/1‑149 (MQ=255)
gcgcCAGCGCGCGTTTCCTCACAGCCAAACGGCGGTTCCGGTACACCGCTCTTGACGGCACCGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGcaca < 2:232006/149‑1 (MQ=255)
gcCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGa < 2:798126/149‑1 (MQ=255)
gcCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGa < 1:922667/149‑1 (MQ=255)
ccAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTGCGGTACACCGCGCTTGACGGCAACGGATGGAATATGGGAGGATACGTCGCCGCAGATCTCGTGAAATGCCGGCAGAATGGCCTGAATTTTAGCGGGTTTGGGGGTCGCACAGAc > 2:257503/1‑149 (MQ=255)
gcgTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCTGGATCCTTCGCCGAAGATCTCGTGAAATGCCAGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTgg > 2:452241/1‑149 (MQ=255)
gTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCACCGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGTATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTg < 1:149043/149‑1 (MQ=255)
tttCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGc < 1:609042/149‑1 (MQ=255)
tCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCAt > 1:16784/1‑149 (MQ=255)
tCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAAt > 1:545334/1‑149 (MQ=255)
tgcacacgggATGTTCCGGTACACCGCTCTTGCCGGCAACGGATGCAATATGGCCGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGCATGGCCGGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGc < 2:1305054/142‑1 (MQ=255)
tGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGc < 1:588239/149‑1 (MQ=255)
tGCCAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGc > 1:917228/1‑149 (MQ=255)
ccAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCAt > 2:1152021/1‑149 (MQ=255)
ccAAAGGGCTGTTCCGGTACACCGCTCTGGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCAt > 1:185700/1‑149 (MQ=255)
cAAAGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCAtt > 2:496674/1‑149 (MQ=255)
aaaGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAAGATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGATTTGCCTGAAGTTTCGCGGGATTGTTGGTCGCACTGAGAACTTGTTGCATACTCAGCATTa > 2:880898/1‑149 (MQ=255)
aaGGGCTGTTCCGGTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTAc < 2:884774/149‑1 (MQ=255)
ccGGTACACCGCTCTTGACGGCAACGGATGCAATATGCCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGGCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAAtt < 2:1461005/149‑1 (MQ=255)
ggTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTaa > 1:873144/1‑149 (MQ=255)
gTACACCGCTCTTGACGGCAACGTATGCAATATGGCAGTTTCCTTCGCCGAAGATCTCGTGAAATTCCTGAAGTATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACATCTTGGTGCTTAATCAGCATTACTCAGAAAATTAAc < 2:862290/149‑1 (MQ=255)
gTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAAc < 2:462786/149‑1 (MQ=255)
gTACACCGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTAGCCGAAGATCTCGAGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTGGGTGCATAATCAGAATTACTCAGAAAATTaaa > 2:1316099/1‑148 (MQ=255)
ccGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAc > 1:610256/1‑149 (MQ=255)
ccGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAc < 2:1360361/149‑1 (MQ=255)
ccGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAc < 1:1557145/149‑1 (MQ=255)
cGCTCTTGACGTCAACGGAAGCAATATGGCAGGATCCTTCGCAGAAGATATCGTGAAATGCCTGCAGAATGGCCTGAATTATAGCGGGATTGGTGGACGCACAGACAACTTGGTGCTTAAAAAGCATTACTCAGAAAATTAACGTTAca > 2:1087553/1‑149 (MQ=255)
cGCTCTTGACGGCAACGGATGCAATATGGCAGGTTCCTTCGCCGATGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCCCAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAca > 1:226620/1‑149 (MQ=255)
cGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTTGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAATTTAACGTTAca < 1:10461/149‑1 (MQ=255)
cGCTCTTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGAGTGGTGGTCGCACAGACAACGTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAcc > 2:30339/1‑148 (MQ=255)
ctctTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTAcagc > 2:165496/1‑149 (MQ=255)
ctctTGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGAGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAAATAACGTAAcacc > 2:1339092/1‑147 (MQ=255)
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ACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCACTGCCAAAGGGCTGTTCCGGTACACCGCTCTCGACGGCAACGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGC > NC_000913/4633488‑4633778
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
