Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A11 F46 I0 R1
|
97 |
59.2 |
2066676 |
97.0% |
2004675 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
NC_000913 |
4,633,785 |
C→A |
21.9% |
intergenic (‑40/‑12) |
yjjX ← / → ytjC |
non‑canonical purine NTP phosphatase, ITPase/XTPase/phosphatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,633,785 | 0 | C | A | 21.9%
| 112.1
/ 25.3
| 75 | intergenic (‑40/‑12) | yjjX/ytjC | non‑canonical purine NTP phosphatase, ITPase/XTPase/phosphatase |
| Reads supporting (aligned to +/- strand): ref base C (34/24); new base A (8/9); total (42/33) |
| Fisher's exact test for biased strand distribution p-value = 4.20e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCAACCCGTGCCAAAGAG > NC_000913/4633643‑4633931
|
cGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGaaaa > 1:222146/1‑149 (MQ=255)
ggATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATCGCCTGAATTATAGCGGGATTGGTGGTCGCACAGACAACTTCGTCTATAATCAGCAATACTCATAAAATTAACGTTACAGCATTCAACGaaaaaa > 2:665590/1‑149 (MQ=255)
gATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCGGAATTTTAGCGGGAGTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGaaaaaa > 2:153221/1‑149 (MQ=255)
aTGCAATATGGCAGGATCAGTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACATCTTGGTGCATAATCAGCATTACTCAGAATATTAACGTTACAGCAGAATACGGaaaaaaa < 2:354643/149‑1 (MQ=255)
gCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGc < 1:808439/149‑1 (MQ=255)
gCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGc < 1:217832/149‑1 (MQ=255)
aaTATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCTGAATCGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGAATACTTCGTGCAGAATCAGCATTACTAAGAAAATTAACGTTACAGCATTATACGGAAAAAAAGCag > 1:596189/1‑148 (MQ=255)
atGGCAGGATCCTTCGCCGAAGATCTCGAGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATGTCTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGtt > 2:560498/1‑149 (MQ=255)
ggCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTCCTCAGAAAATTAACGTTACAGCAGTATACGCAAAAAAAGCATGTTAc > 2:98866/1‑149 (MQ=255)
gCAGGATCCTTCGCCGAAGAGCTCGTGAAATGCCTGCACAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTTCAGCAGTATACGGAAAAAAAGCAAGTTACa > 2:721666/1‑149 (MQ=255)
aGGTTCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAgg < 1:405764/149‑1 (MQ=255)
ggATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGAGTGGGGGTCGCACAGACAACTTGGTGCATAATCAGCATAACTCACAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGt < 2:245055/149‑1 (MQ=255)
aTCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGtat < 2:813145/149‑1 (MQ=255)
ccTTAGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATAc < 1:237172/149‑1 (MQ=255)
cTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATAcc > 1:48185/1‑149 (MQ=255)
ttCGCCGAAGATCTCGTGTAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCt > 1:554363/1‑149 (MQ=255)
ttCGCCGAAGATCTCGTGAAATGCCTGCTGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTATCGTTACAGCAGTAGACGGAAAAAAAGCATGTTTCAGGTATACCt > 2:871401/1‑149 (MQ=255)
tCGCCGAAGATCTCGTTAAATTCCAGCAGAATTGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTTCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTa < 2:1003442/149‑1 (MQ=255)
gCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGCCAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAACAAGCATGTTACAGGTATACCTAGt > 2:742020/1‑149 (MQ=255)
ccGAACATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCTGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACCGCAGTATACGGAAAAAAAGCATGTTACAGGGATACCTAGTc < 1:1023148/149‑1 (MQ=255)
ctaaGATCTGGTGAAATCCCTGCAGAATTGCCTGAATTTTAGCGTGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTcc < 2:288912/147‑1 (MQ=255)
cGAAGATCTAGTGAAATGCCTGCAGAATGGCCTGAATTATAGCGGGATTGGTGGTCGCACTGACAACTTGGTGCATAATCAGCATTACTCAGAAATTTAACGTTACAGCAGTTTAATGAAAAAAAGCATGTTACAGGTATACCTAGTcc > 2:863166/1‑149 (MQ=255)
gATCTCGGGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCa < 2:345853/149‑1 (MQ=255)
tcaaaTGCCTGCATAATGGCAGGAATTTAAGCGTGATTGGTGGTCGCAAAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACCGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGaa < 2:234337/147‑1 (MQ=255)
tGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGaa < 1:420796/149‑1 (MQ=255)
gAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGaaa < 1:272442/149‑1 (MQ=255)
aaaTGCCTGCAGAATGGCCTGAATTTTAGCCTGATGGGTGGTCGCACAGACAACTTGGTGCATACTCAGCATTACTCAGAAAATGAACGTTACAGCAGGAGACGGAACAAAAGCATGTTACATGTATACCTAGTCCGCAACGGAGCAAc > 2:662306/1‑149 (MQ=255)
cTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTg < 1:22848/149‑1 (MQ=255)
tGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGt > 1:17444/1‑137 (MQ=255)
tGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGt < 2:17444/137‑1 (MQ=255)
gCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCGGCATAACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATCTTACAGGTATACCTAGTCCGCCACGCTGAAACGCAGTggc > 1:805751/1‑148 (MQ=255)
gCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGa > 2:523765/1‑149 (MQ=255)
aTGGCCTGAATTTTATCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCAATACTCAGAAAAATAACGTTACAGCAGTATACGGAAAAAAAGCCTGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGcc < 1:728637/149‑1 (MQ=255)
cTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATCCCTAGTCCGCCACGGTGAACCGCAGTGGACCGCcgcgcg > 2:645117/1‑149 (MQ=255)
cTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCg > 2:549375/1‑149 (MQ=255)
tGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGa > 1:870180/1‑149 (MQ=255)
aTTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATAAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGt < 1:530364/149‑1 (MQ=255)
cGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAATGAAAAAAAGCATGTTTCAGTTATACCTTGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCCgg > 2:462161/1‑149 (MQ=255)
cGGGAGTGGTGGGAGCACAGACAACTTGGTGCATAATCAGCATTACTCAGACAATTCACGTTACAGCAGTATACGGAAAAAACGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAgg < 1:98866/149‑1 (MQ=255)
tggtttGGTGGTCGCACAGAAAACTTGGTGTATTTTGAGGATTACTCAGAAAATTAACGTTAGAGCAGTATACGGTAATAAAGCATGTTACATGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTAAggg < 1:665590/145‑1 (MQ=255)
ggATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTACGCGACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGc > 2:56621/1‑149 (MQ=255)
ggATTGGTGGGCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGc < 1:698366/149‑1 (MQ=255)
gtCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAAGGTTACAGCAGTATACGGAAAAAACGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTAGTCAGGGCCAGTCTGAc > 2:203228/1‑149 (MQ=255)
tCGGACAGACAACTTGGTGCATAATCAGCATTAATCAGAAATTTAACGGTACAGCTGTATACGGAATAAATGCATGTTACAGGTATTCCTAGTCCGCCACGGGGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACa < 2:77491/149‑1 (MQ=255)
tCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAATCATGTTACAGGTATACCAAGTCCGCCACGGTGAAACGCAGTGTAACGCCGAGCGAAGTATTCAGGGCCAGTCTGACa < 2:718250/149‑1 (MQ=255)
acaGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGCAAAAAAAGCATGTTACAGGTATACCAAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCGGACAGccc > 2:693331/1‑149 (MQ=255)
aGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGc > 2:804149/1‑149 (MQ=255)
aaCTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGAc > 2:817461/1‑149 (MQ=255)
aaCTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATCCCTAGTCCGCCACGGGGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGACAGTCTGACAGCCCGCTGAc > 2:469242/1‑149 (MQ=255)
gTGCATAATCAGCATTACTCAGAAAATTAACGGTACAGCAGGTTAAGGAAAAAAAGCATGTTACTGGATTACCTAGTCGGCCACGGTGAAGCGCAGGGGATCGCCGAGCGGCGGGGTCCGGGGCGGGGGGCCGGCCCGCTGACCGccga > 2:1002945/1‑147 (MQ=255)
gaaTAATCAGCATTACTCATAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAg < 2:468090/147‑1 (MQ=255)
gCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGGATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAg > 2:9853/1‑149 (MQ=255)
cATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAgg > 1:458519/1‑149 (MQ=255)
aaTCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGa < 1:153221/149‑1 (MQ=255)
aaTCAGCATTACTCAGAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGa < 1:877568/149‑1 (MQ=255)
tCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGc > 2:132022/1‑149 (MQ=255)
gCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGAAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAAc < 2:222146/149‑1 (MQ=255)
aTTACTCAGAAAATTAACGTTACAGCAGTATACGGACAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGGGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAg < 2:422998/149‑1 (MQ=255)
aTTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAg > 1:557677/1‑149 (MQ=255)
ttACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGAATGTTACAGGTATAACTAGTCCGCCCCGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAgg > 1:68011/1‑149 (MQ=255)
tACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGc > 1:111708/1‑149 (MQ=255)
aCTCAGAAAACTAACGTTACAGCAGTATACGGAAAAAAAGCATGATACAGGTATACCTAGTCCGCCACGGGGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCg < 1:645117/149‑1 (MQ=255)
tCAGAAAATTAACGGTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTCGTCCGCCACGGGGAAACGCAGTTGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGAt < 1:560498/149‑1 (MQ=255)
aGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGCCAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGc > 2:334074/1‑149 (MQ=255)
aGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGc > 2:339124/1‑149 (MQ=255)
gAAAATTAACGTTACAGCAGTATAAGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCa > 1:298541/1‑149 (MQ=255)
aaaaTTTACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAg > 1:258022/1‑149 (MQ=255)
aaaaTTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGccg > 1:364812/1‑147 (MQ=255)
aatacaCGATACAGCAGTATACGGAAACAAAGCATGTTACAGGTATACCTAGTCCGCCCCGGGGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGt < 1:721666/144‑1 (MQ=255)
aTTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGAAGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTg > 1:423469/1‑149 (MQ=255)
tttaagTTACTCCATTATAAGGAAAAATATCATGTAACATGTATTCCTAGTCCTCCACGGTGAAAAGCAGTGTAACGAGGAGCGACGTTATCAGGGCAAGTCTGACAGCCCGCTGACCGCCATAGTTGAGCAACAGGCGATGCAGGTgg < 1:983551/144‑1 (MQ=255)
aCAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGTAGGTGGCAACCCGt < 2:870180/149‑1 (MQ=255)
agcagTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCAACCCGTGc > 1:178900/1‑149 (MQ=255)
gTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGAGAAGTATTCAGGGCCAATCTGACAGCCCGCTGACCGACAAAGGTGAGCAACAGGCGATGAATGTGGCAACACGTGCCaaa > 1:644455/1‑149 (MQ=255)
taCGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCCGGTGGCCACCCGTGCCCAcgag > 1:127429/1‑149 (MQ=255)
|
CGGATGCAATATGGCAGGATCCTTCGCCGAAGATCTCGTGAAATGCCTGCAGAATGGCCTGAATTTTAGCGGGATTGGTGGTCGCACAGACAACTTGGTGCATAATCAGCATTACTCAGAAAATTAACGTTACAGCAGTATACGGAAAAAAAGCATGTTACAGGTATACCTAGTCCGCCACGGTGAAACGCAGTGGAACGCCGAGCGACGTATTCAGGGCCAGTCTGACAGCCCGCTGACCGCCAAAGGTGAGCAACAGGCGATGCAGGTGGCAACCCGTGCCAAAGAG > NC_000913/4633643‑4633931
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
