Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F48 I0 R1
|
217 |
96.9 |
3144200 |
97.2% |
3056162 |
148.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| JC JC |
NC_000913 |
4,640,551 |
IS1 (–) +9 bp |
100% |
intergenic (+9/‑383) |
yjjY → / → yjtD |
uncharacterized protein/putative methyltransferase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3583428 = | NA (NA) | 112 (1.240) |
91/276 |
NT |
100% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
4640551 = |
0 (0.000) | intergenic (+9/‑391) |
yjjY/yjtD |
uncharacterized protein/putative methyltransferase |
| * |
? |
NC_000913 |
= 3584195 | NA (NA) | 92 (1.020) |
73/274 |
NT |
100% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 4640559 |
0 (0.000) | intergenic (+17/‑383) |
yjjY/yjtD |
uncharacterized protein/putative methyltransferase |
Only 100 of 124 total aligned reads displayed.
GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583575‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTA > NC_000913/4640551‑4640698
GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTTGCAGCATCACCG > 2:933383/1‑149
AGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGA < 1:640748/149‑1
AGATAGCGCTCAAGTCCGGCGGTCGTTTTGCCGATACGCCCCACCCCGTCAGTAGCTGCACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCTGAAAGATGGCAGCATCCCCGA > 2:1253879/1‑149
GATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAG < 2:732347/149‑1
GCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGC > 2:1557577/1‑149
CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGG < 1:589564/149‑1
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGAC > 1:212060/1‑149
TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACAC < 1:28869/149‑1
GTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACC < 1:1300339/149‑1
TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC < 2:1456758/149‑1
CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGCAGCCACTGGTGCACCTCAAAAACCCCATCATACCCGAAATCAGTAAGATGGCAGCATCACCTCGGGGCCGGACACCCct > 2:1040437/1‑147
CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAA < 1:217754/149‑1
CGGTGCTTTTGCCGGTACGCACCACCCCGTCAGAAGCTGAACAGCAGCGACAGCTGAAAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAA < 1:1079293/149‑1
GTGCTTTTGCCGTTACGCACCACCCCGTCAGTCGCTGAACAGGAGGGACAGCTGATAGACACAGAAGCCACTGGAGCACCTCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAA < 2:328142/149‑1
GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAA > 1:777397/1‑149
GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAA < 1:527956/149‑1
GTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAA < 1:898649/149‑1
GCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACT > 1:467210/1‑149
TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGTGCACCTCAAAAACACCATCATACACTAAATCATTAAGTTGGCAGCATCACCGAGGGGCCGGCCCCCCAATAAAACTAag > 2:391942/1‑147
TTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCAACGCGGGGACGGACACCCAAAAAAACTACG > 1:1554273/1‑149
TGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCT < 1:352369/149‑1
GCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACGCTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTT > 1:122180/1‑149
TTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGGTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTT < 1:441712/149‑1
TTACGCACCACCCCGTCAGTAGCGGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTT < 2:507754/149‑1
TACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTG < 2:1128225/149‑1
CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCAACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGAC > 1:1166811/1‑149
CACCACCCAGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGACACTTGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGCCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACAT < 2:1434936/149‑1
ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATt > 2:444993/1‑148
ACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATA > 1:1151779/1‑149
ACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT > 1:361172/1‑149
TCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTT < 1:1213007/149‑1
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGCAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGCCATATATCAAGTTCAA > 1:531970/1‑149
GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAA < 1:1557577/149‑1
TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAT > 1:133726/1‑149
AGCTGAACAGGAGGGAACGCTGATAGAAACAGAAGCCACTGGAGCAACTCAAAAACACCATCATACACTAAATCACTAAGGTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATT < 2:1279334/149‑1
TGAACAGGAGTGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTA < 1:1228412/149‑1
GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACAAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACCCCCAATAAACCTACGCTTCGTTTACATAAATCAAGTTCAAATGTAt > 2:728276/1‑148
ACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCA < 2:931815/149‑1
CAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAAATACGCTTCGTTGACATATAGCAAGTTCAAGTGTCGCAC > 2:842369/1‑149
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACCCCCAATAAAACTACGCTTCGTTGACAGATATCAAGTTCAATTGTAGCACG > 1:255758/1‑149
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACG < 1:719133/149‑1
gtGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAATCACCATCATACACTAAATCAGTAAGTGTGCAGCATCACCGAGGCGCCGGACACCCAATAAAACTACGCTTCGGTGACATATATCAAGTTCAATTGTAGCACGTTAA < 1:295019/147‑1
gcGACAGCTGATAGAAACAGAAGCCACAGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGATGACATATATCAAGTTCAATTGTAGCACGTTAA < 2:1373626/147‑1
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAAC > 1:1276550/1‑149
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAAC < 1:1229600/149‑1
GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATT < 1:992189/136‑1
TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACCCCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGA > 1:889813/1‑149
AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAA > 1:767981/1‑149
ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCA < 2:1164516/149‑1
acGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCAT < 2:1282927/147‑1
AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATC > 1:791938/1‑149
GAAGCCACTGGCGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGAAGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCG < 2:884199/149‑1
ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCCCCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTGCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA > 1:1250938/1‑149
CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAA > 2:425811/1‑149
TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTATGTTGGCAGCATCACCGATGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAA < 2:191661/149‑1
GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGAGGAAATCATCGTATCTAAAT > 2:408559/1‑149
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACTCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTA < 2:8095/149‑1
CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTA < 2:212060/149‑1
ACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAG > 1:440303/1‑149
CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGC > 1:186356/1‑149
CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATTGTAGCT > 1:232850/1‑149
TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGGTGACATATATCAAGTTCAATTGTAGCCGGTTAACAGTTTGATCAAATCATCGTATCTAAATGCTAGCTT > 1:1379171/1‑149
CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTT > 2:804547/1‑149
CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACCTGAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCATT > 1:1239418/1‑149
AAAAACACCATCATACACTAACTGAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTC < 2:1462398/149‑1
AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGGTAACAGTTTGAGGAAATCATCGTATCTAAATGGTAGCTTTC > 2:379008/1‑149
AAAAACACCATAATACACTAAATCAGTACGTTGGAAGCATCACCGAGGGGCCGGAGACCGATTAAAACTACTCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTC < 2:1147694/149‑1
AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCG < 2:633089/149‑1
aACCATCATACACTAAATCAGTAAGTTGGCCGCATCACCGAGGGGCCGGACACCCCATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCAC < 1:1040437/148‑1
ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCTATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACA < 1:504851/149‑1
ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACA > 1:1245840/1‑149
CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACAT < 2:133726/149‑1
CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATT > 2:1110919/1‑149
CATACACTAACTCAGTAAGTTCGCAGCATCACCGAGGGGCCGGACATCCAATAAAACTACGCTTCGTTGACATATATAAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATT < 2:1030436/149‑1
TACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAATTCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTT > 1:1070173/1‑149
TACACTAAATCAGTAAGTTGGCAGCATCAACGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTT < 2:773106/149‑1
ACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTA > 2:1293503/1‑149
ACACTAAATCAGTAAGTTGGCAGCAGCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGATCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTA < 2:1514513/149‑1
ACACTAAATCAGTAAGTTGGAAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGTCATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTA < 1:497179/149‑1
AAATCAGTAAGTTGGCAGCATCAGCGAGGGGCCGGACACCCAATTAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT < 2:58052/149‑1
AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTGAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTAACTAAAGGCTAGCTTTCGTCACATTATTTTAATAATC > 2:1031903/1‑149
ATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCC < 2:777397/149‑1
TCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCA > 1:1263290/1‑149
CAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAA < 2:361172/149‑1
AGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAAC < 2:950649/149‑1
TAAGTTTGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTA < 1:94853/149‑1
AAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAG < 1:379008/149‑1
AGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCCCGGTAACAGTTTGTTGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAAGAATCCACCTAGT > 1:149741/1‑149
GTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTTAATGCTAGCTTTCGTCACATTATTTTAATAATCAAACTAGTT > 2:429567/1‑149
GTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTT < 1:437727/149‑1
gctGCATCACCGAGGGGCCGGACACCCAATAAAACTACGAGTCGTTGACATATATCAAGTTCAAGTGTAGCACGTTAAAAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCAT < 1:842369/146‑1
CAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATC < 2:198505/149‑1
GCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAAAGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCAT > 2:574087/1‑149
CATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATA < 2:388730/149‑1
ATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCAAACTAGTTGCATCATAC > 2:863787/1‑149
TCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACA > 1:566740/1‑149
TCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACA > 1:53270/1‑149
ACCGAGGGGCCGGTCACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCTCGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAAC > 1:932329/1‑149
CGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTATCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTA > 2:1398286/1‑149
CGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCAAACTAGTTGCATCATACAACTA > 2:1343396/1‑149
GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3583575‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATACAACTA > NC_000913/4640551‑4640698
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
