Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F46 I0 R1 166 60.6 2059618 97.1% 1999889 148.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp 100% intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)73 (1.230) 58/276 NT 100% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 0 (0.000)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)61 (1.040) 50/274 NT 100% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 0 (0.000)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583575‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATA  >  NC_000913/4640551‑4640692
                                                                                                                                                                                                                                                                                                  
GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCG                                                                                                                                               >  1:890512/1‑149
   ATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCCCCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCACCGAGG                                                                                                                                            >  1:18964/1‑149
    TAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTATGTTGGCAGCATCACCGAGGG                                                                                                                                           >  1:1023020/1‑149
       CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGTCAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCCGCCTCACCGAGGGGCC                                                                                                                                        >  1:877588/1‑149
       CGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAACCCGAAGCCACTGGAGCACCTCAAAAACACCCTCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCC                                                                                                                                        <  2:690504/149‑1
        GCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAATCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCG                                                                                                                                       <  2:19135/149‑1
         CTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGG                                                                                                                                      <  2:411257/149‑1
             TGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGGAGCCACTGGAGCGCCTCAATCACGCCATCATGCCCTAACTCAGTTAGTTGGCAGCATCGCCGAGGGGCCGGCCAC                                                                                                                                  >  1:475547/1‑149
               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGGTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACGAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC                                                                                                                                >  1:88106/1‑149
               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC                                                                                                                                <  2:625347/149‑1
               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC                                                                                                                                <  1:382461/149‑1
               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC                                                                                                                                <  1:889680/149‑1
               TCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCC                                                                                                                                >  1:897730/1‑149
                    CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAA                                                                                                                           >  1:501953/1‑149
                       TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACAATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAAC                                                                                                                        >  1:692733/1‑149
                         cctaTGCCGTCACCCACCACCCCGTCACTAGCTGAACAGGACGGACAGCTGATACAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTA                                                                                                                      <  1:1025374/145‑1
                          TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTAC                                                                                                                     >  1:855013/1‑149
                          TTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCAGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAGATCAGTAAGTTGGCAGCTTCACCGTCGGGCCGGACACCGATTAAAAGTAC                                                                                                                     >  1:212557/1‑149
                                CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATATAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCCTCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCG                                                                                                               >  2:287728/1‑149
                                CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGCGGGGCCGGCCACCCAATAACACTACGCTTCG                                                                                                               >  2:161877/1‑149
                                CGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCG                                                                                                               <  2:851819/149‑1
                                    ACGCACCACCGCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACTGAAGCCACTGGAGCACCTCAAAAACCCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGA                                                                                                           <  2:831363/149‑1
                                     CGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGAC                                                                                                          <  1:734116/149‑1
                                      GCACCACCCCGTCAGTAGCTGAACAGGATGGACAGCTGATAGAAACAGAAGCCACTGGATCACCTCAAAAACACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACA                                                                                                         <  1:222462/149‑1
                                      GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGATCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGGATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACA                                                                                                         <  2:48790/149‑1
                                      GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACA                                                                                                         <  2:182349/149‑1
                                            CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACCCCCAATAAAACTACGCTTCGTTGACATATATC                                                                                                   >  1:208981/1‑149
                                            CCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATC                                                                                                   <  1:493600/149‑1
                                                GTCAGTAGCTGAACAGGAGTGACAGCTTATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACTCCCAATAAAACTACGCTTCGTTGACATATATCAAGT                                                                                               <  2:255687/149‑1
                                                  CAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTC                                                                                             <  2:599968/149‑1
                                                      AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATT                                                                                         <  2:144710/149‑1
                                                       GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCGCCGAGGGGCCGGACCCCCAATAAAACTACGCTTCGTTGACATATATCAAGATCAATTG                                                                                        >  1:846193/1‑149
                                                       GCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCAGCATACACTAAATCAGTAAGTTGGCAACATCACCGAGGGGCCGGCCACCCAATAAAACTACGCTTCGTTGACATATAACAAGTTCAATTG                                                                                        >  2:1006758/1‑149
                                                        CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGT                                                                                       <  1:1008815/149‑1
                                                        CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGT                                                                                       >  1:455885/1‑149
                                                         TGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTAAGCTTCGTTGACATATATCAAGTTCAATTGTt                                                                                      >  2:858081/1‑148
                                                          GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAAGACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAG                                                                                     >  1:903216/1‑149
                                                          GAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAG                                                                                     >  1:513788/1‑149
                                                                GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTT                                                                               <  1:721483/149‑1
                                                                  tGGACAGATGATATAAACAGAAGACACTGGAGCACCTCAAAAACACAATCATACACTAAATAAGTAAGTTGGAAGCATCACAGAGGGGCCGGACACCAAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAA                                                                             <  1:674647/148‑1
                                                                  GGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAA                                                                             >  2:597653/1‑149
                                                                   GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGAGATATATCAAGTTCAATTGTAGCACGTTAAC                                                                            >  2:684586/1‑149
                                                                       AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTT                                                                        >  2:436923/1‑149
                                                                       AGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTT                                                                        >  1:56841/1‑149
                                                                         CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGGTCAATTGTAGCACGTTAACAGTTTt                                                                      >  2:803840/1‑148
                                                                          TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGA                                                                     <  2:890512/149‑1
                                                                           tATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGAT                                                                    <  1:486534/148‑1
                                                                             TAGAAACAGAAGCCACTGGAGCACCTCAAAAACAACATCATACACTAAATAAGTAAGTTTGCAGAATCACCGAGGGGCCGGACAACCAATAAAACTACGCTTCGTAGACATATATCAAGTGCAATTGTAGCACGTTAACAGTATCATGA                                                                  >  1:62089/1‑149
                                                                                 AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATC                                                              >  1:917590/1‑149
                                                                                        GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTAT                                                       <  1:888130/149‑1
                                                                                            CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAGGTTTGCAGCCTCACCGAGGGGCTCGACACCAAATAACACTACGCTTCGTTGACATATATCAAGTTCAATTCTCGCACGTTACCAGTTTGATGAAATCATCGTATCTta                                                   >  2:535958/1‑147
                                                                                                  CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTA                                             >  1:847039/1‑149
                                                                                                  CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGACGGACACCCAATAAAACAACGCATAGATGACATATATCAAGTTCAATTGTAGCAAGTTAACAGTATGATGAAATCATCGTTTCAAAATGCTA                                             >  1:741809/1‑149
                                                                                                     CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCT                                          >  1:504318/1‑149
                                                                                                      TCAAAACCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTT                                         >  2:284880/1‑149
                                                                                                      TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCCGCATCACCGAGGCGCCGGCCACCCAATAAAACGACGCTTCGTTGACATTTATCAAGTGCAATTGGAGCACGTTAACAGTTTGTTGACATCATCGTATCTAAATGCTCGCTT                                         >  2:424628/1‑149
                                                                                                       CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTT                                        >  2:221953/1‑149
                                                                                                       CAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTT                                        >  1:805078/1‑149
                                                                                                        AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTC                                       >  1:440467/1‑149
                                                                                                         AAAACAACATAATACACTAAATCAGTAAGTTTGCAGCATCACCGATGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCG                                      <  2:692733/149‑1
                                                                                                          AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGT                                     <  1:642522/149‑1
                                                                                                             CACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAACACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCAC                                  >  1:353248/1‑149
                                                                                                                CATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGCGGCCGGACACGCAATAAAACTACGCTTCGTTGACATATAACAAGTTCAATTGTAGCAAGTTAACAGTTTGATGAAATCATCGTATATATATGCTAGATATCGACAGATT                               >  2:610400/1‑149
                                                                                                                        ACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAAT                       >  1:283104/1‑149
                                                                                                                           AAATCAGTAAGTTTGCAGCATCAACGAGGGGACGGACAGCCAATAATACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGTTGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT                    <  2:404144/149‑1
                                                                                                                            AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGCCACCCAATAAACCTACGCTTCGTTGACATATATCAAGGTCAATTGTAGCACGTGAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTTTTTTAATAATa                   >  1:195814/1‑148
                                                                                                                               CAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATAAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAA                <  2:855013/149‑1
                                                                                                                                AGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAAC               >  1:659039/1‑149
                                                                                                                                AGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAAC               >  2:842948/1‑149
                                                                                                                                  TAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTA             <  1:597653/149‑1
                                                                                                                                      TTGGCAGCATCACCGAGGGGCCGGACACCCAATAATACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTG         >  1:1027610/1‑149
                                                                                                                                      TTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTACAATTGTAGCACGTTATCAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTACTTG         >  1:388106/1‑149
                                                                                                                                        GGCAGCATCACCGAGGGGCCGGACACACAATAAAACTACGCTTCGTTCACATATATCAAGTTAAATTGTAGCACGTTAACAGTTTGATGAAATCATCGAATCAAAATGCTATCTTTCGTCAAATTATTTTAATAATCCAACTAGTTGCA       >  1:933826/1‑149
                                                                                                                                         GCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCAT      >  1:1023842/1‑149
                                                                                                                                           AGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCA    >  1:967958/1‑149
                                                                                                                                             CATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGTTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATA  <  1:436923/149‑1
                                                                                                                                                                                                                                                                                                  
GAGATAGCGCTGATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583575‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCATCATA  >  NC_000913/4640551‑4640692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A