Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F1 I1 R1
|
83 |
73.5 |
3575638 |
92.3% |
3300313 |
107.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
NC_000913 |
3,736,663 |
(TTG)4→3 |
coding (513‑515/825 nt) |
bax ← |
putative glucosaminidase |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
NC_000913 |
3736653 |
3736655 |
3 |
92 [0] |
[0] 95 |
bax |
putative glucosaminidase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
3736656 = | 0 (0.000) | 90 (1.340) |
60/194 |
0.0 |
100% |
coding (522/825 nt) |
bax |
putative glucosaminidase |
| ? | NC_000913 |
= 3736652 |
0 (0.000) | coding (526/825 nt) |
bax |
putative glucosaminidase |
GATK/CNVnator alignment
N/A
