Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A14 F1 I2 R1 | 70 | 59.9 | 2639336 | 94.5% | 2494172 | 113.3 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,366,953 | G→A | G10R (GGA→AGA) | yhcF → | putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,366,953 | 0 | G | A | 100.0% | 406.4 / NA | 113 | G10R (GGA→AGA) | yhcF | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (60/53); total (60/53) | |||||||||||
Only 100 of 113 total aligned reads displayed.
AAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTC > NC_000913/3366820‑3367087 | aaaGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGt < 1:626183/139‑1 (MQ=255) ttAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCttt > 2:305382/1‑139 (MQ=255) aCAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAgc > 1:199486/1‑139 (MQ=255) aaTGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGc > 1:1016315/1‑119 (MQ=255) aaTGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGc < 2:1016315/119‑1 (MQ=255) aaTGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAgcgc < 2:114696/139‑1 (MQ=255) tGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGATCAATGTAAAATTACTGATTGCCAGAAGTGCCttt > 2:871000/1‑121 (MQ=255) tGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCaa < 2:1242057/139‑1 (MQ=255) tCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCg < 1:1069601/139‑1 (MQ=255) cAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCt > 2:785009/1‑139 (MQ=255) gCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGa < 2:316822/139‑1 (MQ=255) ttttAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATa < 1:608336/139‑1 (MQ=255) tAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATagag < 2:532773/139‑1 (MQ=255) aaGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGTTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc < 1:845613/127‑1 (MQ=255) aaGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCATTTTTGCCATGTCAGCGCAAGc > 2:845613/1‑127 (MQ=255) aTGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCa > 2:976212/1‑139 (MQ=255) aGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATag < 1:1009129/128‑1 (MQ=255) aGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATag > 2:1009129/1‑128 (MQ=255) aaCTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGCAAAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGt > 1:647912/1‑139 (MQ=255) aCTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTa < 2:551440/139‑1 (MQ=255) aaCCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATa > 1:614658/1‑118 (MQ=255) aaCCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATa < 2:614658/118‑1 (MQ=255) aaCCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAgg > 2:50809/1‑139 (MQ=255) aaCCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAgg > 1:884950/1‑139 (MQ=255) aaCCGACATGACAGATATTACAGGCAATCTGACGGTCCCGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGATGTTAAgg > 2:414086/1‑139 (MQ=255) cATGACAGATATTACAGGTAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCg < 2:106637/106‑1 (MQ=255) cATGACAGATATTACAGGTAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCg > 1:106637/1‑106 (MQ=255) tGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTg > 2:1299664/1‑139 (MQ=255) aGATATTACAGGCAATCTGACGGTCCTAGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGATGACTCTGGAAg > 1:785310/1‑139 (MQ=255) atTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGc > 1:311921/1‑139 (MQ=255) cAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGAc > 2:173172/1‑112 (MQ=255) cAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGAc < 1:173172/112‑1 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGTC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg < 2:735818/139‑1 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg < 1:785009/139‑1 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg < 2:322549/139‑1 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg < 2:199486/139‑1 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg > 2:634990/1‑139 (MQ=255) ggCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg > 2:346731/1‑139 (MQ=255) gCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGc < 2:523515/72‑1 (MQ=255) cAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGcc < 1:301124/87‑1 (MQ=255) cAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGcc > 2:301124/1‑87 (MQ=255) cAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTTATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa > 1:533214/1‑139 (MQ=255) cAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa > 1:1124944/1‑139 (MQ=255) cAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa > 2:615215/1‑139 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTg < 2:324852/60‑1 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTg > 1:324852/1‑60 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGa < 2:770888/91‑1 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGt > 1:864099/1‑115 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGt < 2:864099/115‑1 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTAc > 2:1316867/1‑139 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCATTTTTTGCCATGTCAGCGCAAGCCGCTGa > 1:770888/1‑91 (MQ=255) aaTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGA‑TGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACt > 2:962388/1‑139 (MQ=255) aTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATagag < 2:34465/95‑1 (MQ=255) aTCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATagag > 1:34465/1‑95 (MQ=255) cTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTcc > 2:925830/1‑139 (MQ=255) gACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTGTGGAAGCTGCAGCTTGTACTCCaa < 2:804233/139‑1 (MQ=255) aCGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGc > 2:418209/1‑127 (MQ=255) aCGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGc < 1:418209/127‑1 (MQ=255) ggTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCttt > 1:1166523/1‑57 (MQ=255) ggTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCttt < 2:1166523/57‑1 (MQ=255) cTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGc < 1:1132733/58‑1 (MQ=255) cTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGc > 2:1132733/1‑58 (MQ=255) cTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGAt > 2:964082/1‑80 (MQ=255) cTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGAt < 1:964082/80‑1 (MQ=255) gtggAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc > 2:360364/1‑70 (MQ=255) gtggAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc < 1:360364/70‑1 (MQ=255) gtggAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCaa > 2:163357/1‑139 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATa > 1:381600/1‑73 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCt > 2:762099/1‑114 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCt < 1:762099/114‑1 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg > 1:577531/1‑116 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTg < 2:577531/116‑1 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTc < 1:288415/121‑1 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTc > 2:288415/1‑121 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcg < 1:432773/139‑1 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcg > 1:861649/1‑139 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcg > 2:989077/1‑139 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcg > 1:491116/1‑139 (MQ=255) ggC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcg > 2:698011/1‑139 (MQ=255) gC‑AAAATGAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGCAAGCTGCAGCTTGTACTCCAATACTAAGCAAcggcgg > 1:316250/1‑139 (MQ=255) c‑AAAATGAACAATGT‑AAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGa < 1:912914/68‑1 (MQ=255) c‑AAAATGAACAATGT‑AAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGa > 2:912914/1‑68 (MQ=255) gAACAATGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAgttgtt < 1:99919/139‑1 (MQ=255) tGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc > 1:632988/1‑51 (MQ=255) tGTAAAATTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGc < 2:632988/51‑1 (MQ=255) aaaaTTACTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTg > 1:1299186/1‑92 (MQ=255) aCTGA‑TGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt < 1:962388/139‑1 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa < 1:972411/94‑1 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTa > 2:972411/1‑94 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTa > 2:105129/1‑133 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTa < 1:105129/133‑1 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt > 2:472777/1‑139 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt > 2:1177958/1‑139 (MQ=255) cTGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCAtt > 2:133231/1‑139 (MQ=255) cTGATTGCCAGAAGCGCCTTTTTTGCCATGTCAGCGCAAGc < 2:622796/41‑1 (MQ=255) cTGATTGCCAGAAGCGCCTTTTTTGCCATGTCAGCGCAAGc > 1:622796/1‑41 (MQ=255) tGATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTc < 1:305382/139‑1 (MQ=255) gATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTaa < 1:438395/123‑1 (MQ=255) gATTGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTaa > 2:438395/1‑123 (MQ=255) tGCCAGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTc > 2:241734/1‑139 (MQ=255) | AAAGCGTTAGCCTCACACTGACAATGGCTCCAGCTTTTAAGGATGAAGGGGAACTAACCGACATGACAGATATTACAGGCAATCTGACGGTCCTGGTGGAGGC‑AAAATGAACAATGTAAAATTACTGATTGCCGGAAGTGCCTTTTTTGCCATGTCAGCGCAAGCCGCTGATAGAGTATCAATTGACGTTAAGGTGACTCTGGAAGCTGCAGCTTGTACTCCAATACTAAGCAACGGCGGAGTTGTTAACTTCGGTAGTCATTCAGTC > NC_000913/3366820‑3367087 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |