Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A9 F1 I2 R1	78	48.0	2243616	94.8%	2126947	114.4

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,143,783	T→C	L173P (CTG→CCG)	yegE →	putative diguanylate cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,143,783	0	T	C	100.0%	256.6 / NA	68	L173P (CTG→CCG)	yegE	putative diguanylate cyclase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (31/37); total (31/37)

ACTCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCTGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTACTTT  >  NC_000913/2143649‑2143918

aCTCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGa                                                                                                                                     <  2:891271/139‑1 (MQ=255)

  tCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGAtt                                                                                                                                   <  1:434582/139‑1 (MQ=255)

   cGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  <  1:1085503/139‑1 (MQ=255)

   cGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  <  2:600914/139‑1 (MQ=255)

       aGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTAt                                                                                                                              <  2:472589/139‑1 (MQ=255)

                         ctGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATctgc                                                                                                            >  1:588385/1‑139 (MQ=255)

                         ctGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATctgc                                                                                                            <  1:895037/139‑1 (MQ=255)

                                    tgtTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTgcgc                                                                                                       <  2:424748/133‑1 (MQ=255)

                                    tgtTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTgcgc                                                                                                       >  1:424748/1‑133 (MQ=255)

                                     gtTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCa                                                                                                <  2:325750/139‑1 (MQ=255)

                                      ttCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCaa                                                                                               >  1:805608/1‑139 (MQ=255)

                                      ttCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCaa                                                                                               >  2:507044/1‑139 (MQ=255)

                                         tGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCgg                                                                                                                                       >  2:788026/1‑96 (MQ=255)

                                           gTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGTTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCAc                                                                                          >  1:389856/1‑139 (MQ=255)

                                             tGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACgg                                                                                        <  1:507044/139‑1 (MQ=255)

                                              gTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGt                                                                                       >  1:141499/1‑139 (MQ=255)

                                                ccTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTg                                                                                     >  1:1047608/1‑139 (MQ=255)

                                                ccTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGAAATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTg                                                                                     >  2:62807/1‑139 (MQ=255)

                                                         gCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAg                                                                            >  2:154481/1‑139 (MQ=255)

                                                                  cGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTc                                                                   <  2:457120/139‑1 (MQ=255)

                                                                   gATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCa                                                                  >  2:550509/1‑139 (MQ=255)

                                                                   gATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCa                                                                  <  2:1047608/139‑1 (MQ=255)

                                                                     tCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACg                                                                <  2:141499/139‑1 (MQ=255)

                                                                         ctcAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAg                                                            <  2:359567/139‑1 (MQ=255)

                                                                         ctcAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAg                                                            >  2:213929/1‑139 (MQ=255)

                                                                           cAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGcc                                                          >  2:788244/1‑139 (MQ=255)

                                                                                 aTTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATcaca                                                    >  2:505930/1‑139 (MQ=255)

                                                                                 aTTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATcaca                                                    >  2:48365/1‑139 (MQ=255)

                                                                                   ttttGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCACTGCTCACGTTAGCCATca                                                      <  1:411665/135‑1 (MQ=255)

                                                                                   ttttGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCACTGCTCACGTTAGCCATca                                                      >  2:411665/1‑135 (MQ=255)

                                                                                    tttGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATGTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTg                                                 >  2:664324/1‑139 (MQ=255)

                                                                                        atatGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  <  2:94684/54‑1 (MQ=255)

                                                                                        atatGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  >  1:94684/1‑54 (MQ=255)

                                                                                        atatGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGt                                                                                       >  2:945491/1‑97 (MQ=255)

                                                                                        atatGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGt                                                                                       <  1:945491/97‑1 (MQ=255)

                                                                                        atatGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGt                                             >  2:269409/1‑139 (MQ=255)

                                                                                           tGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTaa                                          >  2:472121/1‑139 (MQ=255)

                                                                                             ggTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  <  2:94601/49‑1 (MQ=255)

                                                                                             ggTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTg                                                                                                                                  >  1:94601/1‑49 (MQ=255)

                                                                                             ggTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTT‑‑AGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTg                                      <  2:826350/139‑1 (MQ=255)

                                                                                               tACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTg                                      <  2:805608/139‑1 (MQ=255)

                                                                                                    tccgAATCCATCGTCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCCCACTAACCGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCttt                                 <  1:423590/136‑1 (MQ=255)

                                                                                                    tCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGGTTGTTATTTaa                                                                                                                          >  1:24482/1‑50 (MQ=39)

                                                                                                    tCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTaa                                                                                                                          <  2:24482/50‑1 (MQ=255)

                                                                                                          tCCATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGc                           <  2:588385/139‑1 (MQ=255)

                                                                                                            cATCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTg                         >  2:164868/1‑139 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAAcc                                                                                                                       <  1:845236/43‑1 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAAcc                                                                                                                       >  2:845236/1‑43 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCAt                                                        >  1:262569/1‑106 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCAt                                                        <  2:262569/106‑1 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATg                            >  2:273611/1‑134 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATg                            <  1:273611/134‑1 (MQ=255)

                                                                                                              tCGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTa                       >  2:1005165/1‑139 (MQ=255)

                                                                                                               cGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTAt                      <  1:505930/139‑1 (MQ=255)

                                                                                                               cGGCGCTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTAt                      <  1:269409/139‑1 (MQ=255)

                                                                                                                  cgcTCTGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTg                   >  1:933206/1‑139 (MQ=255)

                                                                                                                     tctGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCg                <  2:1054268/139‑1 (MQ=255)

                                                                                                                     tctGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCg                <  1:213929/139‑1 (MQ=255)

                                                                                                                      ctGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGt               <  1:525008/139‑1 (MQ=255)

                                                                                                                      ctGGCACTGGTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGt               <  1:989450/139‑1 (MQ=255)

                                                                                                                               gTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGtt                                                              <  2:93131/83‑1 (MQ=255)

                                                                                                                               gTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGtt                                                              >  1:93131/1‑83 (MQ=255)

                                                                                                                               gTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTa                                                             >  2:875564/1‑84 (MQ=255)

                                                                                                                               gTGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTa                                                             <  1:875564/84‑1 (MQ=255)

                                                                                                                                tGCCGCCGGGATTGTTATTTAAACCACATTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGACCTTTTAc     <  2:671969/139‑1 (MQ=255)

                                                                                                                                tGCCGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTAc     <  1:550509/139‑1 (MQ=255)

                                                                                                                                   cGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTACttt  <  1:1072576/139‑1 (MQ=255)

                                                                                                                                   cGCCGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTATCGATGCTGTATCTGCCGTGGCCTTTTAtttt  <  1:664324/139‑1 (MQ=255)

ACTCGGCAGCGCCATTGTTCCGCCTCTGTTGGGGGGTGTTCTGGTTGTCCTGCTGACGCCCGGAGACGATCCTCTCAGGGCATTTTTGATATGGGTACTGTCAGAATCCATCGGCGCTCTGGCACTGGTGCCGCTGGGATTGTTATTTAAACCACACTATCTGCTGCGCCATCGCAACCCACGGTTGCTTTTTGAGTCGCTGCTCACGTTAGCCATCACACTGACGTTAAGCTGGCTTTCGATGCTGTATCTGCCGTGGCCTTTTACTTT  >  NC_000913/2143649‑2143918

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A