Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F433 I3 R1
|
16 |
161.1 |
8199666 |
93.6% |
7674887 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
2,470,173 |
IS5 (–) +4 bp |
coding (1043‑1046/1332 nt) |
gtrS → |
serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 2290113 | NA (NA) | 214 (1.330) |
109/196 |
0.0 |
95.8% |
noncoding (1/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
2470173 = |
9 (0.060) | coding (1043/1332 nt) |
gtrS |
serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
| * |
? |
NC_000913 |
= 2470176 | 9 (0.060) | 172 (1.070) |
96/196 |
0.2 |
94.8% |
coding (1046/1332 nt) |
gtrS |
serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage |
| ? | NC_000913 |
= 3131340 |
NA (NA) | noncoding (1195/1195 nt) |
IS5 |
repeat region |
Only 100 of 214 total aligned reads displayed.
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2290016‑2290113
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCA > NC_000913/2470173‑2470270
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCC > 2:349190/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCC > 1:2764019/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCC < 1:208320/99‑1
CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCT < 2:3551702/99‑1
CTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCT < 1:968570/99‑1
TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA > 2:2922457/1‑99
TGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTA > 1:3814279/1‑99
TCGGCGAAGGTAAGTTGATGGCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAC < 2:1485685/99‑1
TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAC < 2:3992817/99‑1
TCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAAC < 1:1570287/99‑1
CGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACA < 1:502271/99‑1
GGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACAT > 1:1208369/1‑99
GGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACAT > 1:3010206/1‑99
GCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATA > 1:3430182/1‑99
CGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAA < 1:1838423/99‑1
CGAACGTAAGTTGATGACTCATGATGAACCCTGGTCTAGGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAA < 1:2059384/99‑1
GAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAA > 1:1778994/1‑99
AAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAA < 1:72921/99‑1
GGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGA < 1:1984451/99‑1
GGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGA < 1:3066310/99‑1
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAA < 1:3462376/99‑1
AAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAA < 1:1496675/99‑1
TTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTTAGATCAGGGACTTCTTCGCACCTTCCCTCACATAAAAGACAATAT > 2:12058/1‑99
TGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATA < 1:2588019/99‑1
GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATAT > 2:6595/1‑99
GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATAT > 1:2540417/1‑99
GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATAT < 1:166149/99‑1
GATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATAT < 1:1213191/99‑1
ATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATT > 1:2933779/1‑99
TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATGTCATATCAGGGGCTGGTTCGCGCCTTCCCTAACATAAAAGACAATATAggt < 2:512428/99‑4
TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATATAAGACAATATATTT > 2:443018/1‑99
TGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTT > 2:2655973/1‑99
TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAA < 2:3516012/99‑1
TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAA > 1:2191483/1‑99
TCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAA > 1:1903948/1‑99
CATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAA < 1:1942429/99‑1
TGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACA > 2:2366116/1‑99
GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACAT < 2:2219923/99‑1
GATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACAT > 1:372754/1‑99
ACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGAT > 1:2412131/1‑99
CCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATT > 2:1119521/1‑99
CCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTT > 1:2227839/1‑99
CTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTA > 1:181346/1‑99
TATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCAT > 1:1392758/1‑99
CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTA < 2:1446938/99‑1
CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTA > 1:2207809/1‑99
CTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTA > 2:2979718/1‑99
TCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTAT > 2:119338/1‑99
AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTAT > 1:13023/1‑99
AGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTAT > 2:1391125/1‑99
GATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATT < 2:1055760/99‑1
GACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTT < 2:1743971/99‑1
CAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTA > 2:1753691/1‑99
CAAACATGATCGCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTA > 1:3554106/1‑99
CAAACATGATATCATATCAGGGACTTGTTCGCACCTTCCCTAATATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTA < 2:626527/99‑1
AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAT > 1:803324/1‑99
AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAT > 2:3795937/1‑99
AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTAT > 1:545680/1‑99
AAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGAGTTATAACATTGTTATTAATTTTTAT > 1:1223116/1‑99
AACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATT < 2:2545014/99‑1
AACATGATCGCATATCAGGAACTTGTTCGCACCTTCTCTAACATAAAAGACAATATATTTAATAACATTAGATTTATATCATTGTTATTATTTTTTATT < 2:2592206/99‑1
ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTG > 1:227963/1‑99
ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTG > 2:3037276/1‑99
ACATGATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTCTTTATTTTTTATTG > 2:3704755/1‑99
GATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTACATCTATATCATTGTTATTATTTTTTATTGCTTC > 2:1207843/1‑99
ATCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCT > 2:3070736/1‑99
TCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTA > 1:210118/1‑99
TCTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTA > 1:3590027/1‑99
CTCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTAT < 1:451191/99‑1
TCATATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTTCTTCTATT > 2:1886973/1‑99
TATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTT > 1:415293/1‑99
ATCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTA > 1:907728/1‑99
tccGGGACTTGTTCGCTCCTTCTCTAACATAAAAGATATTATATTTACAAACTTTAGATTTTTATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 2:3325925/96‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 2:787153/99‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 1:1004302/99‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 1:2989034/99‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 1:1421497/99‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT < 1:993278/99‑1
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTAT > 2:2184030/1‑99
TCAGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATCAGCATTATATCATTGTGATTATTTTTTATTGCTTCTATTTTTAT > 2:3872445/1‑99
AGGGACTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTA > 1:2436191/1‑99
GACTTGTTCGCACCTTCCCTAACATAAACGACAATATATTTAAAAACATTAGAGTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAA > 2:2095030/1‑99
caTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAATACATTAGAGTTATATCATTGTTATAATTTATTATTGATTCTATTTTTATTAGAAAT < 2:4044226/97‑1
CTTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAAT < 2:862518/99‑1
TTGTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATA < 1:2683231/99‑1
TGTTCGCAACTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAA < 2:3828725/99‑1
GTTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAAT > 2:2597942/1‑99
TTCGCACCTTCCCTAACATAAAAGACAATATTTTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATA < 2:3226028/99‑1
TTCGCACCTTCCCTAACATAAAAGACAATATCTTTAACAACATTACATTTATATCATTGTTATTATTTTTTATTGCTTCGATTTTTATTAGAAATAATA > 1:3666588/1‑99
TTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATA > 2:901997/1‑99
TTCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATA < 2:2995730/99‑1
TCGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAA < 2:831873/99‑1
CGCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAA < 2:3648620/99‑1
GCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAA > 1:3159867/1‑99
GCACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAA > 1:106765/1‑99
CACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAAT > 2:1548975/1‑99
ACCTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATA > 1:743561/1‑99
CTTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAA < 2:692346/99‑1
TTCCCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTTCTTCTATTTTTATTAGAAATAATAAAATAAAG > 2:3399922/1‑99
CCTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCA > 1:2919015/1‑99
ACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2290016‑2290113
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAACATAAAAGACAATATATTTAAAAACATTAGATTTATATCATTGTTATTATTTTTTATTGCTTCTATTTTTATTAGAAATAATAAAATAAAGGCA > NC_000913/2470173‑2470270
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
