Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
783,757 |
A→C |
I198L (ATT→CTT) |
pnuC → |
nicotinamide riboside transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 783,757 | 0 | A | C | 99.2%
| 852.8
/ ‑2.5
| 235 | I198L (ATT→CTT) | pnuC | nicotinamide riboside transporter |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base C (124/109); total (125/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 235 total aligned reads displayed.
ATGATGGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCA > NC_000913/783661‑783852
|
atgGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTg < 1:2229264/100‑1 (MQ=255)
tgGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGc < 1:2347170/100‑1 (MQ=255)
gtgtTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCAc > 1:4562904/1‑100 (MQ=255)
gtgtTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCAc < 1:3137340/100‑1 (MQ=255)
tgtTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACt > 1:582468/1‑100 (MQ=255)
tgtTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGATGATTGTTAACGTGATTAGCGTCGTTCTTTTTGCACt > 2:4305310/1‑100 (MQ=255)
gtTATCTATCGTGGCAATGATTCTGATGACGCGGAAGTAGGTGGAAAACTGGCTGTTGTGGGTGATGATTAACGTGATTATCGTCGTTCTTTTGGCACtg > 2:248915/1‑99 (MQ=255)
tatctatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCa > 2:116349/1‑100 (MQ=255)
atctatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAg > 2:2686544/1‑100 (MQ=255)
ctatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAggg > 1:1257327/1‑100 (MQ=255)
ctatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAggg > 2:1572306/1‑100 (MQ=255)
tatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGc > 1:5095760/1‑100 (MQ=255)
tatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGc > 1:3565170/1‑100 (MQ=255)
tatcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGc > 1:2954002/1‑100 (MQ=255)
atcGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCg > 2:4935219/1‑100 (MQ=255)
gTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGttt < 2:1660245/100‑1 (MQ=255)
gTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGttt > 1:190258/1‑100 (MQ=255)
gTGGCAATGATTCTGATGACGAGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGCTTATTAACGTCATTAGCGACGTTCTTTTTGCACTTCAAGGCCttt > 2:3151293/1‑100 (MQ=255)
ggCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTAc > 2:2529602/1‑100 (MQ=255)
ggCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTAc < 1:4781743/100‑1 (MQ=255)
ggCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTAc > 2:4139019/1‑100 (MQ=255)
cAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGc > 2:5338641/1‑100 (MQ=255)
aaTGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGcc > 1:2033729/1‑100 (MQ=255)
aaTGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGcc > 1:4177147/1‑100 (MQ=255)
aaTGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGAGTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGcc < 2:4866417/100‑1 (MQ=255)
tGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCAt < 1:2365034/100‑1 (MQ=255)
gATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATg > 2:4735523/1‑100 (MQ=255)
gATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATg < 2:4342244/100‑1 (MQ=255)
tCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGtct < 2:1874398/100‑1 (MQ=255)
tCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGtct > 2:4209112/1‑100 (MQ=255)
cTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGtctc > 2:1744016/1‑100 (MQ=255)
tgatgaCGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTctct < 1:1784009/100‑1 (MQ=255)
gatgaCGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTg < 1:5004573/100‑1 (MQ=255)
tgaCGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGa > 1:1006209/1‑100 (MQ=255)
gaCGCGTAAGTATGTGGAAAACTGGCTGTTGTGTGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAg < 2:1522046/100‑1 (MQ=255)
gaCGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAg < 2:2751847/100‑1 (MQ=255)
aCGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGt < 1:2595089/100‑1 (MQ=255)
cgcgTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTa > 2:4081728/1‑100 (MQ=255)
cgcgTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGCTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTa > 2:3243819/1‑100 (MQ=255)
gcgTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTAc < 2:1017795/100‑1 (MQ=255)
cgTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTAca > 2:1088024/1‑100 (MQ=255)
tAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGTCATGTCTCTGGAGTAcatc < 1:1761652/100‑1 (MQ=255)
aaGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTAcatca < 2:3786555/100‑1 (MQ=255)
gTATGTGGAAAACTGGCTGTTGTGGGGGATTAGTAACGTGATTAGCGTCGTTCGGTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACatcatc > 2:5225516/1‑100 (MQ=255)
tATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATcc > 2:4432769/1‑100 (MQ=255)
tATGGGGAAAACGGGGTGGGGGGGGTGATGGGTAACGTGAGTAGCGGCGTTCGTTTTGCTCTTCAGGGCGGTTTCGCCGGGTCTCTGGAGTACATCATcc < 2:2301132/100‑1 (MQ=255)
aTGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCt > 1:3509391/1‑100 (MQ=255)
tgtgGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTg > 1:3809166/1‑100 (MQ=255)
tgGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGAc < 2:5128865/100‑1 (MQ=255)
tgGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGAc < 2:3641772/100‑1 (MQ=255)
aaaaCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCtt < 1:869174/100‑1 (MQ=255)
aaaaCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCtt < 1:869672/100‑1 (MQ=255)
aaaCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCttt > 2:4574921/1‑100 (MQ=255)
aaaCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCttt < 1:440407/100‑1 (MQ=255)
aCTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTAt < 2:2926220/100‑1 (MQ=255)
ggCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTgc > 1:3852219/1‑100 (MQ=255)
ggCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTgc > 1:2017747/1‑100 (MQ=255)
cTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTgcgc < 2:1716623/100‑1 (MQ=255)
tgttgtGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCt < 1:5411483/100‑1 (MQ=255)
tgttgtGGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCt > 2:3570517/1‑100 (MQ=255)
gtgGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAAc < 2:3268609/100‑1 (MQ=255)
gtgGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAAc < 2:728563/100‑1 (MQ=255)
gtgGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAAc > 1:3954250/1‑100 (MQ=255)
tgGGTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACg > 2:1138228/1‑100 (MQ=255)
gggTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGCACATCATCCTGACCTTTATTGCGCTCAACgg > 1:5233321/1‑100 (MQ=255)
ggTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGc > 1:98765/1‑100 (MQ=255)
ggTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGc < 2:4621743/100‑1 (MQ=255)
ggTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGc > 2:304409/1‑100 (MQ=255)
gTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCa < 1:5020330/100‑1 (MQ=255)
gTGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCa > 2:670418/1‑100 (MQ=255)
tGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAg > 2:1378299/1‑100 (MQ=255)
tGATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAg < 1:1821639/100‑1 (MQ=255)
gATTATTAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGc > 1:4060249/1‑100 (MQ=255)
attattAACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGcc < 1:5153773/100‑1 (MQ=255)
ttattaACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCg > 2:336563/1‑100 (MQ=255)
ttattaACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCg > 1:3420641/1‑100 (MQ=255)
attaACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGa > 1:5318118/1‑100 (MQ=255)
taACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGAtg < 1:1520193/100‑1 (MQ=255)
taACGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGAtg < 2:4128512/100‑1 (MQ=255)
aaCGTGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGCGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGCtgt > 2:4820405/1‑100 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGag > 1:3593684/1‑99 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGag > 1:4967870/1‑99 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGAt > 1:1076641/1‑100 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGAt < 1:3682074/100‑1 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGAt < 1:4475497/100‑1 (MQ=255)
tGATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGAt < 2:3508558/100‑1 (MQ=255)
gATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATc > 2:448576/1‑100 (MQ=255)
gATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATc < 1:4493713/100‑1 (MQ=255)
gATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATc < 1:5514478/100‑1 (MQ=255)
gATTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATc < 2:715205/100‑1 (MQ=255)
aTTAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCa < 1:2605472/100‑1 (MQ=255)
ttAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCaa > 1:2800254/1‑100 (MQ=255)
tAGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAAc > 1:4334863/1‑100 (MQ=255)
aGCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACa > 1:2274904/1‑100 (MQ=255)
gCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAg < 1:3298216/100‑1 (MQ=255)
gCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAg < 1:2502908/100‑1 (MQ=255)
gCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAg > 1:5534175/1‑100 (MQ=255)
gCGTCGTTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAg > 1:764667/1‑100 (MQ=255)
gtcgtTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAgcg > 1:1198131/1‑100 (MQ=255)
cgtTCTTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCa < 2:5479522/100‑1 (MQ=255)
|
ATGATGGTGTTATCTATCGTGGCAATGATTCTGATGACGCGTAAGTATGTGGAAAACTGGCTGTTGTGGGTGATTATTAACGTGATTAGCGTCGTTATTTTTGCACTTCAGGGCGTTTACGCCATGTCTCTGGAGTACATCATCCTGACCTTTATTGCGCTCAACGGCAGCCGGATGTGGATCAACAGCGCA > NC_000913/783661‑783852
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
