Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
917,078 |
T→G |
D202E (GAT→GAG) |
ybjD → |
putative OLD family ATP‑dependent endonuclease; DUF2813 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 917,078 | 0 | T | G | 96.7%
| 608.8
/ 6.4
| 181 | D202E (GAT→GAG) | ybjD | putative OLD family ATP‑dependent endonuclease; DUF2813 family protein |
| Reads supporting (aligned to +/- strand): ref base T (4/2); new base G (89/86); total (93/88) |
| Fisher's exact test for biased strand distribution p-value = 6.83e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.89e-01 |
Only 100 of 182 total aligned reads displayed.
CGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGG > NC_000913/916982‑917174
|
gCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCa > 1:4233033/1‑100 (MQ=255)
cACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAg > 1:2890609/1‑100 (MQ=255)
ggTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGAtt > 2:3998395/1‑100 (MQ=255)
ggTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAgcat > 2:1580408/1‑97 (MQ=255)
tGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCg < 1:1937710/100‑1 (MQ=255)
gCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGt > 1:5017119/1‑100 (MQ=255)
ccAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTc < 2:3937711/100‑1 (MQ=255)
aaTGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAgg < 2:4426574/100‑1 (MQ=255)
aTGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGCCAggg < 1:5282572/100‑1 (MQ=255)
tGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGa < 1:1870744/100‑1 (MQ=255)
cccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACtt < 1:4958363/100‑1 (MQ=255)
ccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAACATCTCTCTGAGGGGCAGATTCGTCAGGGACttt > 1:5518881/1‑100 (MQ=255)
ccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACttt > 1:2140225/1‑100 (MQ=255)
tAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAAGCTCTCTGAGGGGCAGATTCGTCAGGGACTTTcc < 2:359839/100‑1 (MQ=255)
aTGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGc < 1:2372613/100‑1 (MQ=255)
tgtgGAAGTCACCGCGCGCCCGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCa > 1:4349585/1‑100 (MQ=255)
tgtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCa > 2:2457553/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCaa > 2:3336819/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCaa > 2:3418018/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCaa > 1:5080317/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCCCTCTGCGGGGCAGATTCGTCAGGGACTTTCCGCaa > 2:821755/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCAGTGAGTTATCATCACATCCGCAAAATCTCTCTGAGGCGCAGATTCGTCAGGGACTTTCCGcga > 2:3603936/1‑98 (MQ=255)
tgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAAt > 1:1622427/1‑100 (MQ=255)
tgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAAt < 2:4689626/100‑1 (MQ=255)
tgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAAt < 1:4299104/100‑1 (MQ=255)
tgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGAATTTCCGCAAt > 2:1079589/1‑100 (MQ=255)
ggAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATg > 2:3564367/1‑100 (MQ=255)
ggAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATg > 1:2845409/1‑100 (MQ=255)
gAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATgg < 1:1688746/100‑1 (MQ=255)
gAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATgg > 2:366279/1‑100 (MQ=255)
aGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTa < 2:2519329/100‑1 (MQ=255)
gTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCCCATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCCGGGACTTTCCGCAATGGTAc < 2:1308430/100‑1 (MQ=255)
gTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTAc > 1:2314014/1‑100 (MQ=255)
gTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTAc > 1:4029269/1‑100 (MQ=255)
gTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTAc > 1:5093953/1‑100 (MQ=255)
cACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAg > 1:4112211/1‑100 (MQ=255)
cACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCACAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAg > 2:3819344/1‑100 (MQ=255)
aCCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgc < 1:2236123/100‑1 (MQ=255)
ccGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgct < 2:5000282/100‑1 (MQ=255)
gcgcgcCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgctgc < 1:3890199/100‑1 (MQ=255)
cgcCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTg < 1:2886483/100‑1 (MQ=255)
cgcCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTg < 1:1413209/100‑1 (MQ=255)
gcCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGCCTTTCCGCAATGGTACAGCTGCTTGa > 2:5382678/1‑100 (MQ=255)
ccAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAg < 2:4795760/100‑1 (MQ=255)
cAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGc < 1:1032676/100‑1 (MQ=255)
aGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCa < 2:4799449/100‑1 (MQ=255)
gCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCat > 2:1950155/1‑100 (MQ=255)
gCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCat > 1:3623991/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt < 2:4208721/100‑1 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 2:1164712/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 2:1585492/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt < 2:2779424/100‑1 (MQ=255)
aTTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTAttt > 2:4376853/1‑100 (MQ=255)
tttCCTCGCCCGTGTGTTATCCTCACATCCGCAAAATCTCTCAGAGGGGCAGATTCGTCAGGGACTGTCCGCAATGGTACAGCTGCTTGAGCATTATTtc < 1:126457/100‑1 (MQ=255)
ctCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtct < 1:2435051/99‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 2:2679953/100‑1 (MQ=255)
ccTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctca > 1:2703486/1‑99 (MQ=255)
cTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGTACTTTCCGCGATGGTACAGCTGCTTGAGCATTATTTCTCTg < 2:5232267/100‑1 (MQ=255)
cTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTg > 1:3081331/1‑100 (MQ=255)
tCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGa < 2:2687132/100‑1 (MQ=255)
cccGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCa > 1:3028472/1‑100 (MQ=255)
cccGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCa > 1:543646/1‑100 (MQ=255)
ccGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAg < 2:2261046/100‑1 (MQ=255)
cGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg > 1:1584778/1‑100 (MQ=255)
cGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgg < 2:2818326/100‑1 (MQ=255)
gTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg > 1:5245222/1‑100 (MQ=255)
gTGAGTTATCCTCACATCCGCAAAAGCTCTCTGAGGGGCAGATTCGCCAGGGACTTTCCGCAATGTTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg < 1:5169925/100‑1 (MQ=255)
tGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgggg > 1:1362507/1‑100 (MQ=255)
tGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgggg > 1:2406328/1‑100 (MQ=255)
aGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGc > 2:3148092/1‑100 (MQ=255)
gTTATCCTCACATCCGCAAAATCGCTCTGAGGGGCAGATTCGTCAGGGGCTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGcc < 2:3239291/100‑1 (MQ=255)
ttATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGTTTGAGCATTATTTCTCTGAGCAGGGGGCCg < 2:3953566/100‑1 (MQ=255)
ttATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCg < 1:639722/100‑1 (MQ=255)
aTCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCTCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGa > 2:3892907/1‑100 (MQ=255)
tCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGAc < 2:2127838/100‑1 (MQ=255)
tCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGAc < 1:541836/100‑1 (MQ=255)
tCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGAc < 1:997077/100‑1 (MQ=255)
ccTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACa < 1:5332815/100‑1 (MQ=255)
ccTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACa > 2:691932/1‑100 (MQ=255)
cTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAg < 2:3012066/100‑1 (MQ=255)
cTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAg < 2:1502489/100‑1 (MQ=255)
acaTCCGCAAAATCTCTCTGAGGGGCAGATTAGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgcn < 1:1889661/100‑2 (MQ=255)
caTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgcgc < 2:2368639/100‑1 (MQ=255)
caTACGCAAAATCTCTCTGAGGGGCAGATTCGTCAGAGACTTTCTGCAATGGTACAGCTGCTTGAGCATGATTTCTTTGAGCAGGGGGCCGGACAGgcgc > 2:2925017/1‑100 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 1:1072717/100‑1 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 2:189959/100‑1 (MQ=255)
tCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGa > 2:4111981/1‑100 (MQ=255)
tCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGa > 1:2524709/1‑100 (MQ=255)
ccGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGat > 2:2604208/1‑100 (MQ=255)
cGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGata < 2:4077334/100‑1 (MQ=255)
gCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGatat > 1:2016042/1‑100 (MQ=255)
gCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGatat > 1:2017605/1‑100 (MQ=255)
aaaaTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCg < 1:3780867/100‑1 (MQ=255)
aaaaTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCg > 2:1246936/1‑100 (MQ=255)
aaaTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGt < 1:4800648/100‑1 (MQ=255)
aaTCTCTCTGAGGGGCAGATTCGGCAGGGACTTTCCGCAATGGTACAGCTGCTTAAGCATTCTTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGtg < 2:3897678/100‑2 (MQ=255)
aTCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGttt < 2:2023670/100‑1 (MQ=255)
aTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGttt < 1:3300651/100‑1 (MQ=255)
tctctGAGGGGGAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTACTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAAt > 2:5092948/1‑100 (MQ=255)
tctGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGCGCAGGGGGCCGGCCAGGCGCGATATCGTTTAATgc > 1:811406/1‑100 (MQ=255)
|
CGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGG > NC_000913/916982‑917174
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
