Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
917,078 |
T→G |
D202E (GAT→GAG) |
ybjD → |
putative OLD family ATP‑dependent endonuclease; DUF2813 family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 917,078 | 0 | T | G | 96.7%
| 401.7
/ 0.9
| 123 | D202E (GAT→GAG) | ybjD | putative OLD family ATP‑dependent endonuclease; DUF2813 family protein |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base G (66/52); total (69/54) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 125 total aligned reads displayed.
ACGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGG > NC_000913/916981‑917174
|
cGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAgggg < 1:789003/100‑1 (MQ=255)
ggCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGc < 2:1066064/100‑1 (MQ=255)
gCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCa < 1:3522053/100‑1 (MQ=255)
gCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCa < 1:3582708/100‑1 (MQ=255)
gCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCa < 1:566581/100‑1 (MQ=255)
cGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGAt > 2:1843907/1‑100 (MQ=255)
gTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCGCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTc > 2:799176/1‑100 (MQ=255)
aaaTGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAg < 2:676381/100‑1 (MQ=255)
aTGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAggg < 1:1692622/100‑1 (MQ=255)
tGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGa > 1:1129506/1‑100 (MQ=255)
gTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGAc > 1:1955142/1‑100 (MQ=255)
cccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACtt > 1:3362480/1‑100 (MQ=255)
cccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACtt > 2:455057/1‑100 (MQ=255)
cccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACtt > 1:2339147/1‑100 (MQ=255)
cccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACtt > 1:421526/1‑100 (MQ=255)
ccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACttt > 1:2967752/1‑100 (MQ=255)
ccTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACttt > 2:1031545/1‑100 (MQ=255)
ntAATGTGGAAGACACAACGCGCCAGCTCGAATAACTCGCACGTGAGTTATCCTAAAATCCGCAAAATCTCTATGAGGGGCAGATTCGTAAGGGACTTTc > 2:3593361/2‑100 (MQ=255)
cTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTc < 2:2303443/100‑1 (MQ=255)
tAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCACAGGTTACCCTCACACCCGCAAAATCTCTCTGCCGGGCCGATTCGTCAGGGACTTTcc > 2:1770424/1‑100 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCACAATCTCTATGAGGGGCAGATTCGTCCGGGACTTTCAGCac > 1:2873853/1‑99 (MQ=255)
gtgGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCaa > 1:3698677/1‑100 (MQ=255)
ggAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATg < 2:3556015/100‑1 (MQ=255)
ggAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCAGCAATg > 1:793079/1‑100 (MQ=255)
gAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATgg < 1:248245/100‑1 (MQ=255)
aGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTa > 2:3027392/1‑100 (MQ=255)
aGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTa > 1:1726149/1‑100 (MQ=255)
gTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATTTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTAc > 2:110195/1‑100 (MQ=255)
tCACCGCGCGCCAGCTCGGTCTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACa < 1:3822849/100‑1 (MQ=255)
tCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACa > 1:1754860/1‑100 (MQ=255)
cACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAg < 1:2815037/100‑1 (MQ=255)
ccGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgct > 1:970583/1‑100 (MQ=255)
ccGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgct > 2:908748/1‑100 (MQ=255)
cgcgcgCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgctg < 1:997914/100‑1 (MQ=255)
cgcgcgCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAgctg > 1:1209730/1‑100 (MQ=255)
gcCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCTCATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGAATTTCCGCAATGGTACAGCTGCTTGa > 1:3796243/1‑100 (MQ=255)
ccAGCTCGATTTCCTCGCCCGTGGGTTAGCCTCACATCCGCAAAATCTCTCTGCGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAg < 1:1247893/100‑1 (MQ=255)
ccAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAg > 2:2696828/1‑100 (MQ=255)
ccAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAg > 1:1229932/1‑100 (MQ=255)
cAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGc < 1:1473086/100‑1 (MQ=255)
aGCTAGATTTCCTCCCCCGTGAGTTAGCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATGCGTCAGTGACTTGCCGCAATGGTACAGCTGCTTGAGCa < 2:1804979/100‑1 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 1:1815883/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 1:1092279/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 1:2601398/1‑100 (MQ=255)
cTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatt > 2:3795176/1‑100 (MQ=255)
tCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatta > 1:3316165/1‑100 (MQ=255)
tCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCatta < 2:2352849/100‑1 (MQ=255)
taTTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCattatt < 2:1380757/99‑1 (MQ=255)
gATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCattatt > 2:1349388/1‑100 (MQ=255)
gATTTCCTCGCCCGTGAGTTATCCTCACACCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCattatt > 1:3911537/1‑100 (MQ=255)
gATTTCCTCGCCCGCGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGCGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCattatt > 2:191440/1‑100 (MQ=255)
aTTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCattatta > 1:1405618/1‑99 (MQ=255)
tttCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtc < 1:115793/100‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 1:3799979/100‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 1:2431715/100‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 2:1190350/100‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 2:56343/100‑1 (MQ=255)
tCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTtctc < 1:3469863/100‑1 (MQ=255)
cTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTg < 1:217189/100‑1 (MQ=255)
cTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTg > 1:91083/1‑100 (MQ=255)
cTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTg > 2:2624816/1‑100 (MQ=255)
tCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGa > 1:2856363/1‑100 (MQ=255)
gCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGc < 2:1206764/100‑1 (MQ=255)
gTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg > 1:391965/1‑100 (MQ=255)
gTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg > 1:584492/1‑100 (MQ=255)
gTGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggg < 1:2466629/100‑1 (MQ=255)
tGAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAgggg < 1:2869739/100‑1 (MQ=255)
gAGTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAggggg < 2:2715009/100‑1 (MQ=255)
gTTATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGcc > 1:3505434/1‑100 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCgg > 1:3110858/1‑100 (MQ=255)
tATCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCgg < 1:2147406/100‑1 (MQ=255)
tCCTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGAc > 2:1416938/1‑100 (MQ=255)
ccTCACATCCGCAAGGTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATTGTACAGCTGCTTGAGTATTATTTCTCTGAGCAGGGGGCCGGACa < 2:1690567/100‑1 (MQ=255)
ccTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACa > 2:766844/1‑100 (MQ=255)
ccTCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACa < 2:3307528/100‑1 (MQ=255)
tCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAgg < 2:835967/100‑1 (MQ=255)
tCACATCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAgg < 2:3426605/100‑1 (MQ=255)
acacaTCCGCGAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTGCCTCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAgg < 1:2033955/99‑1 (MQ=255)
cacaTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgc > 1:3627695/1‑100 (MQ=255)
acaTCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgcg < 2:1107166/100‑1 (MQ=255)
acaTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgcg > 1:396175/1‑100 (MQ=255)
acaTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGgcg < 1:847030/100‑1 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 2:1836298/100‑1 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 1:574162/100‑1 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg > 2:2418618/1‑100 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 2:143504/100‑1 (MQ=255)
aTCCGCAAAATCTCTCTGAGGGGCAGATTCGTAAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGcgcg < 2:2069340/100‑1 (MQ=255)
tCCGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGACGGACAGGCGCGa > 2:3130138/1‑100 (MQ=255)
ccGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGat < 2:1909143/100‑1 (MQ=255)
cGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGata > 1:1831269/1‑100 (MQ=255)
cGCAAAATCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGata > 2:268862/1‑100 (MQ=255)
gCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGatat > 1:2680453/1‑100 (MQ=255)
aTCTCTCTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGttt > 2:226561/1‑100 (MQ=255)
tctctcTGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTa > 2:556594/1‑100 (MQ=255)
tctGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgc < 1:2846959/100‑1 (MQ=255)
tctGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgc > 1:1791145/1‑100 (MQ=255)
tctGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgc > 1:1791309/1‑100 (MQ=255)
ctGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgcg > 1:3919353/1‑100 (MQ=255)
tGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgcgg > 2:58135/1‑100 (MQ=255)
tGAGGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATgcgg > 1:1155027/1‑100 (MQ=255)
|
ACGGCACGGTGCCAAATGTCCCTAATGTGGAAGTCACCGCGCGCCAGCTCGATTTCCTCGCCCGTGAGTTATCCTCACATCCGCAAAATCTCTCTGATGGGCAGATTCGTCAGGGACTTTCCGCAATGGTACAGCTGCTTGAGCATTATTTCTCTGAGCAGGGGGCCGGACAGGCGCGATATCGTTTAATGCGG > NC_000913/916981‑917174
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
