Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,896,050 |
A→C |
N416H (AAC→CAC) |
pabB → |
aminodeoxychorismate synthase, subunit I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,896,050 | 0 | A | C | 97.1%
| 588.7
/ ‑1.1
| 173 | N416H (AAC→CAC) | pabB | aminodeoxychorismate synthase, subunit I |
| Reads supporting (aligned to +/- strand): ref base A (1/4); new base C (85/83); total (86/87) |
| Fisher's exact test for biased strand distribution p-value = 3.68e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 173 total aligned reads displayed.
CCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCC > NC_000913/1895954‑1896146
|
ccGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACg < 1:4555114/100‑1 (MQ=255)
ccGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACg > 1:5425359/1‑100 (MQ=255)
ccGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACg < 1:1691936/100‑1 (MQ=255)
cGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACaaa < 2:708016/100‑1 (MQ=255)
gACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAAt > 2:1107433/1‑100 (MQ=255)
cGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAAttt < 1:839873/100‑1 (MQ=255)
cAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtc < 1:1934291/100‑1 (MQ=255)
tGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTGGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctgc < 2:1129283/100‑1 (MQ=255)
gCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTtctgct < 2:1712979/100‑1 (MQ=255)
ggTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctgctctgc < 1:4623986/100‑1 (MQ=255)
gTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcg < 1:2383486/100‑1 (MQ=255)
gTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcg < 2:501791/100‑1 (MQ=255)
tGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgg > 2:1317220/1‑100 (MQ=255)
gCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTTCTATCCGCACGCTGACTGCCGTTCACGGACAAATTTTCTGCTCTgcggg < 2:5280876/100‑1 (MQ=255)
cGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggc > 2:2284554/1‑100 (MQ=255)
ggCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggcg > 2:3179077/1‑100 (MQ=255)
gcagcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggcgg > 1:3268302/1‑100 (MQ=255)
agcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTg < 2:2092782/100‑1 (MQ=255)
gcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTgg < 2:5455943/100‑1 (MQ=255)
gcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTgg < 2:4351772/100‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGa < 2:3498483/100‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGa < 1:3601882/100‑1 (MQ=255)
ttGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAt > 2:1300790/1‑100 (MQ=255)
tGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAtt > 2:325276/1‑100 (MQ=255)
tGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAtt < 1:485163/100‑1 (MQ=255)
ggCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTg > 2:90587/1‑100 (MQ=255)
ggCTATTTGAGCTTTGGCGGCAACATGGATGCCAGTATTACTATCAGCACGCTGACTCCCATTCACGGACAAATTTACTGCTCTGCGGGCAGTGGAATTg > 1:4844525/1‑100 (MQ=255)
cTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTc > 2:399929/1‑100 (MQ=255)
tATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTTTGCGGGCGGTGGAATTGTCg < 2:2236799/100‑1 (MQ=255)
tATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCg > 1:1064759/1‑100 (MQ=255)
tATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCg < 2:88252/100‑1 (MQ=255)
aTTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGc > 1:85142/1‑100 (MQ=255)
tttGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGcc < 1:1028848/100‑1 (MQ=255)
ttGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCg > 1:990210/1‑100 (MQ=255)
ttGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCg < 2:1417955/100‑1 (MQ=255)
ttGAGCTTTTGCGGAAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCg < 2:570888/100‑1 (MQ=255)
aGCTTTTGAGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATa > 2:5266531/1‑100 (MQ=255)
gCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAg < 2:5352411/100‑1 (MQ=255)
cTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGTACAAATTTTCTGCCCTGCGGGCGGTGGAATTGTCGCCGATAGc > 2:5422280/1‑100 (MQ=255)
cTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGc > 1:4756562/1‑100 (MQ=255)
tttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCa > 1:3324407/1‑100 (MQ=255)
tttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCa < 1:2108369/100‑1 (MQ=255)
tttGCGGCAACATGGATACCAGTACTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCa < 1:5012377/100‑1 (MQ=255)
gCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGga < 2:4461957/100‑1 (MQ=255)
cGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAGATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaa > 2:5146001/1‑100 (MQ=255)
cGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaa < 2:2165167/100‑1 (MQ=255)
cGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaa < 1:416089/100‑1 (MQ=255)
cGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaa > 1:1465425/1‑100 (MQ=255)
ggCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaag > 2:2884096/1‑100 (MQ=255)
ggCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaag < 1:4321925/100‑1 (MQ=255)
gCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaaga > 1:3621915/1‑100 (MQ=255)
cAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaagaa < 2:4743947/100‑1 (MQ=255)
aaCATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGaagaag < 1:2363724/100‑1 (MQ=255)
aaCATGGATACCAGTATTACTATCCGCACGCTGACGGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGatgaag < 2:4640536/100‑1 (MQ=255)
cATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCg > 1:4261891/1‑100 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGTGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCggn < 1:532923/100‑2 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa > 2:34454/1‑100 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa < 2:4823641/100‑1 (MQ=255)
gttACCAGTAATACTATCCGCACGGTGAATGCCATTCACGGACAAATTTTCTGCACGGCGCACGGGGGAATTGTCGCCGATGTCCAGTAAGGAGCGGAat > 2:1909537/3‑100 (MQ=255)
gATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAat < 1:4567540/100‑1 (MQ=255)
tACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAatat < 1:3714940/100‑1 (MQ=255)
ccAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCa > 1:2154756/1‑100 (MQ=255)
ccAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCa > 1:934322/1‑100 (MQ=255)
cAGTATTACTATCCGCACGCTGGCTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAg < 1:1370896/100‑1 (MQ=255)
cAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAg > 1:490425/1‑100 (MQ=255)
aGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAgg > 2:4883654/1‑100 (MQ=255)
aGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAgg > 1:260559/1‑100 (MQ=255)
gTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGa > 1:2220361/1‑100 (MQ=255)
tATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGaa < 2:1194729/100‑1 (MQ=255)
tACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACt > 1:2097193/1‑100 (MQ=255)
tACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACt < 2:4692165/100‑1 (MQ=255)
aCTATCCTCACGCTTACGGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtt > 2:2771496/1‑100 (MQ=255)
aCTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtt > 1:391278/1‑100 (MQ=255)
cTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACttt > 2:4185757/1‑100 (MQ=255)
tATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtttt < 1:4576920/100‑1 (MQ=255)
tATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtttt < 1:2657921/100‑1 (MQ=255)
ccGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGAt < 2:3381918/100‑1 (MQ=255)
cGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATa < 2:2357085/100‑1 (MQ=255)
cGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATa > 2:4822141/1‑100 (MQ=255)
cGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATa > 1:478509/1‑100 (MQ=255)
gCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATaa > 2:25668/1‑100 (MQ=255)
gCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATaa > 2:4084085/1‑100 (MQ=255)
gCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATaa > 2:3287015/1‑100 (MQ=255)
cACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATaaa < 1:5274653/100‑1 (MQ=255)
cACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATaaa < 1:1346863/100‑1 (MQ=255)
aCGCTGACTGCCATTAACGGAGAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAg < 2:3327332/100‑1 (MQ=255)
cGCTGACTGCCATTCACGGACCAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGGCAGGAAGAAGCGGAATATCGGGAACCTTTTGATAAAGt < 2:3089041/100‑1 (MQ=255)
gCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGtt < 2:1925460/100‑1 (MQ=255)
gCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGtt < 2:4777455/100‑1 (MQ=255)
gCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGtt < 1:2011211/100‑1 (MQ=255)
tGACCGTCATTCACGGACACAGAGTCTGCTATGCGGTCTGGCGAATTGTCGCTTATAGCTACGACCGATCGTAATATCAGGAAACTTTTGATAAAGTTaa < 2:4174232/100‑1 (MQ=255)
gACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAAt < 2:5335017/100‑1 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGGAGAAGCGGAATAGCAGGAAACTGTGGATAAAGGTAAGCg > 1:1648655/1‑100 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAATAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCg < 2:3660512/100‑1 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCg > 2:2571193/1‑100 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCg > 1:3931401/1‑100 (MQ=255)
acATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTan < 1:4431281/99‑2 (MQ=255)
agtAACGGGCAAATTTTCTGCTGAGAGGGCGGTGGAATTGTTGCCGATAGCCAGGAAGAAGCGGAATATCCGGAAACTTTTGATAAAGTTAATCGTATcg < 1:130134/98‑2 (MQ=255)
aTTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATcc > 1:2933810/1‑100 (MQ=255)
aTTCACGGACAAATTTTCTGCTCTGCGGGCGGAGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATcc > 1:2933878/1‑100 (MQ=255)
|
CCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCC > NC_000913/1895954‑1896146
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
