Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,896,050 |
A→C |
N416H (AAC→CAC) |
pabB → |
aminodeoxychorismate synthase, subunit I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,896,050 | 0 | A | C | 99.3%
| 489.5
/ ‑4.2
| 144 | N416H (AAC→CAC) | pabB | aminodeoxychorismate synthase, subunit I |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (66/76); total (67/77) |
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.58e-01 |
Only 100 of 144 total aligned reads displayed.
ACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCC > NC_000913/1895953‑1896146
|
cGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCTGCACGCTGACTGCCATTCACgg < 1:3412429/100‑1 (MQ=255)
cGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACgg > 1:1587530/1‑100 (MQ=255)
cAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGAc < 2:1404770/100‑1 (MQ=255)
cAGCGACGCAATGCAAGGTGCGGAAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGAc < 2:188755/100‑1 (MQ=255)
aGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACa > 1:3063156/1‑100 (MQ=255)
gACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAAt > 1:1987972/1‑100 (MQ=255)
aCGCACTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAAtt > 2:1603077/1‑100 (MQ=255)
cAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtc < 2:506232/100‑1 (MQ=255)
cAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtc > 1:2570133/1‑100 (MQ=255)
cAATGCCTGGTGCGACAGCATTGGCTGTTTGAGCTTTTGCGGCAACAGGGATACGAGTATTACTATCCGCACGCTGACTGCCCTTCACGGACAAATTTtc > 2:3738087/1‑100 (MQ=255)
aaTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtct < 1:2882080/100‑1 (MQ=255)
aaTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtct < 2:2144012/100‑1 (MQ=255)
aTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctg > 1:1719802/1‑100 (MQ=255)
aTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctg > 2:124425/1‑100 (MQ=255)
aTGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctg > 2:347427/1‑100 (MQ=255)
ccTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctgctc > 2:2664341/1‑100 (MQ=255)
tGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTtctgctctg > 2:2957209/1‑100 (MQ=255)
gTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcg > 1:2442523/1‑100 (MQ=255)
cGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggc < 1:352721/100‑1 (MQ=255)
ggCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggcg > 1:2854379/1‑100 (MQ=255)
ggCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggcg > 2:1812468/1‑100 (MQ=255)
gcggcaGTGGCTATTTGAGCGTGTGCGGTAAGATGGATACCAGTATTACTATCCGCCCGCTGACTGCGATTCACGGACAAATTTTCTGCTCTgcgggcgg < 2:2468788/97‑1 (MQ=255)
gcagcaTTGGCTATTTGAGCTTTTGCGGCAACGTGGATACCAGTATTACTATCCGCAGGCTGACTGCCATTCATGGACAAATTTTCTGCTCTgcgggcgg > 2:1444946/1‑100 (MQ=255)
gcagcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTgcgggcgg > 1:49778/1‑100 (MQ=255)
gcaTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTgg < 2:2774080/100‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGa < 2:3435370/100‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGa < 1:2492326/100‑1 (MQ=255)
caTTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGa < 2:2534263/100‑1 (MQ=255)
ttGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAt < 2:1041295/100‑1 (MQ=255)
ttGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAt < 1:982290/100‑1 (MQ=255)
ctGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAAt < 2:1041372/99‑1 (MQ=255)
ggCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTg > 1:722280/1‑100 (MQ=255)
cTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTc < 1:2463807/100‑1 (MQ=255)
cTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTc < 1:561821/100‑1 (MQ=255)
tATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCg < 1:1284596/100‑1 (MQ=255)
aTTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGc > 1:3031138/1‑100 (MQ=255)
ttGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCg < 1:882034/100‑1 (MQ=255)
tGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGa > 1:3383809/1‑100 (MQ=255)
gAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGAt > 2:2587085/1‑100 (MQ=255)
gCTTTTGCGGCAACATGGATACCAGTATTACTATCTGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAg < 2:3942048/100‑1 (MQ=255)
gCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAg < 2:3566834/100‑1 (MQ=255)
cTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGc > 2:1735245/1‑100 (MQ=255)
ttttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGcc > 1:1077576/1‑100 (MQ=255)
ttttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGcc < 1:2283767/100‑1 (MQ=255)
ttttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGcc > 1:1488744/1‑100 (MQ=255)
tttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCa < 2:3308020/100‑1 (MQ=255)
ttGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAg < 2:2873049/100‑1 (MQ=255)
gCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGga < 2:3194708/100‑1 (MQ=255)
cGGCGACGTGGGTACGAGGATTACTATCCTCACGCTGACTGCCATTCACGGATAAATTTGCGTCGCTGCGGGCGGTGGAATTGTCGCCGATAGTCAGtaa > 2:2404670/1‑100 (MQ=255)
cGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaa > 2:1629240/1‑100 (MQ=255)
cGGCAACATGGATACCAGTATTACCATCCCCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGTATTGTCGCCGATAGCCAGgaa > 1:3805562/1‑100 (MQ=255)
ggCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGAGAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGgaag > 2:3619615/1‑100 (MQ=255)
ggCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCAGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCAAGgaag < 2:3069695/100‑1 (MQ=255)
aCATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGc < 1:3281785/100‑1 (MQ=255)
aCATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGc > 1:4069803/1‑100 (MQ=255)
aTGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCgg < 2:509944/100‑1 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa < 1:216707/100‑1 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa > 1:3908355/1‑100 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa < 2:323753/100‑1 (MQ=255)
tGGATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGa > 1:2780396/1‑100 (MQ=255)
ggATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGaa > 1:2168762/1‑100 (MQ=255)
ggATACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGaa < 1:3228529/100‑1 (MQ=255)
ttACCAATATTAAGATGCGCACGCGGACTGACATTCACTGACAAATTGTCTGCTCCGGGGGCGCTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAata < 2:3317711/99‑1 (MQ=255)
aTACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAata < 1:428695/100‑1 (MQ=255)
aTACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAata < 2:3106765/100‑1 (MQ=255)
tACCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAGGAAGCGGAatat > 1:1203607/1‑100 (MQ=255)
aCCAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATc < 1:1745956/100‑1 (MQ=255)
ccAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCa > 2:2888921/1‑100 (MQ=255)
ccAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCa > 1:3673200/1‑100 (MQ=255)
ccAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCa > 2:1020833/1‑100 (MQ=255)
cAGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAg < 2:1340016/100‑1 (MQ=255)
cAGTATTACTATCCGCACGCTGACTGCCACTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAg < 1:3726912/100‑1 (MQ=255)
aGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAgg < 1:1656874/100‑1 (MQ=255)
aGTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAgg < 1:2892394/100‑1 (MQ=255)
gTATTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGa < 2:1517756/100‑1 (MQ=255)
aTTACTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGaaa > 2:1765408/1‑100 (MQ=255)
aCTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATCTCAGGAAACtt > 2:1093538/1‑100 (MQ=255)
aCTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtt > 1:753037/1‑100 (MQ=255)
cTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACttt < 1:624818/100‑1 (MQ=255)
cTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACttt > 2:259709/1‑100 (MQ=255)
cTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACttt > 1:3165055/1‑100 (MQ=255)
cTATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACttt < 1:1042473/100‑1 (MQ=255)
tATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtttt < 2:1959188/100‑1 (MQ=255)
tATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtttt < 2:1922095/100‑1 (MQ=255)
tATCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACtttt < 2:1170272/100‑1 (MQ=255)
aTCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTg > 2:595885/1‑100 (MQ=255)
tCCGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGa < 2:558395/100‑1 (MQ=255)
ccGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGAt < 1:2709811/100‑1 (MQ=255)
ccGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGAt < 1:3961810/100‑1 (MQ=255)
cGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATa > 1:2201313/1‑100 (MQ=255)
cGCACGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATa > 1:1368115/1‑100 (MQ=255)
cGCTGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGt > 1:2523923/1‑100 (MQ=255)
tGACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTaa > 2:463987/1‑100 (MQ=255)
gACTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAAt < 2:1281013/100‑1 (MQ=255)
aCTGCCATTGACGGACAAGTTATCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCTGAATATCAGGAAGCTTTTGATAAAGTTAATc < 2:1548263/100‑1 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCg > 1:1468109/1‑100 (MQ=255)
cTGCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCg > 1:2100206/1‑100 (MQ=255)
gCCATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTa > 1:3695355/1‑100 (MQ=255)
ccATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTAt < 1:2705478/100‑1 (MQ=255)
cATTCACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATc > 1:1658937/1‑100 (MQ=255)
|
ACCGCAGCGACGCAATGCCTGGTGCGGCAGCATTGGCTATTTGAGCTTTTGCGGCAACATGGATACCAGTATTACTATCCGCACGCTGACTGCCATTAACGGACAAATTTTCTGCTCTGCGGGCGGTGGAATTGTCGCCGATAGCCAGGAAGAAGCGGAATATCAGGAAACTTTTGATAAAGTTAATCGTATCC > NC_000913/1895953‑1896146
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
