Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F236 I1 R1
|
155 |
93.2 |
2393300 |
97.8% |
2340647 |
180.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,667,681 |
T→G |
S56R (AGT→CGT) |
hcaT ← |
putative 3‑phenylpropionic transporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,667,681 | 0 | T | G | 100.0%
| 250.5
/ NA
| 72 | S56R (AGT→CGT) | hcaT | putative 3‑phenylpropionic transporter |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (37/35); total (37/35) |
GCGGGAACTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACTCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGA > NC_000913/2667468‑2667913
|
gCGGGAACTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCt > 1:1042384/1‑239 (MQ=255)
gCGGGAACTGCTTTTGCCACGTATTCGCCAGTGCAACGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGAACGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAAACAGa > 1:1134078/1‑236 (MQ=255)
gggAACTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTg < 1:77798/238‑1 (MQ=255)
gAACTGATTTTTCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGcc < 2:894040/238‑1 (MQ=255)
aCTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGCCCTGccccc > 1:588249/1‑239 (MQ=255)
aCTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGcccc < 2:1145396/238‑1 (MQ=255)
ttttGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATaa < 1:694727/239‑1 (MQ=255)
ttttGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATaa < 1:1133877/239‑1 (MQ=255)
gCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCCAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGCAACGGGCAACCAGACCTGCCCCCACTAACAg > 1:755013/1‑238 (MQ=255)
gCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAgg < 1:606655/239‑1 (MQ=255)
tGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCCCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCCTCCCCCAATAACACGGCGGAGGATTCTGGCg > 2:238430/1‑239 (MQ=255)
tGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCg > 2:689923/1‑239 (MQ=255)
tGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGCGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGCAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGAGGGTTTCTGGCg > 1:858086/1‑239 (MQ=255)
gCATCGGTCAACGTTACCAGTGGTGAGAAAAAGGGGTTAAAGCCATTCATCACCAGCATCAGCCCCGCTACGGGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGt < 1:934158/239‑1 (MQ=255)
aaCGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAAt < 2:362678/239‑1 (MQ=255)
tACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATc > 1:403096/1‑235 (MQ=255)
ggtgAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCa > 2:199427/1‑239 (MQ=255)
gtgAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACgg > 1:855301/1‑173 (MQ=255)
gtgAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACgg < 2:855301/173‑1 (MQ=255)
gagaAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCCGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAAACAATCCCTTTAAGCCAGa > 2:1096073/1‑238 (MQ=255)
gagaAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGAc > 1:19195/1‑239 (MQ=255)
gaAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGc > 2:71247/1‑239 (MQ=255)
aaGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACGGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTCAGCCAGACGCTCCa > 2:716095/1‑239 (MQ=255)
aaGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCa > 1:53086/1‑239 (MQ=255)
tAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAgg < 1:949679/238‑1 (MQ=255)
tcatcaCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATg < 2:1042384/239‑1 (MQ=255)
caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGt < 2:53086/239‑1 (MQ=255)
caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGt < 2:403096/239‑1 (MQ=255)
caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGt < 1:1194436/239‑1 (MQ=255)
cATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTg > 1:277838/1‑152 (MQ=255)
cATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTg < 2:277838/152‑1 (MQ=255)
aTCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACt < 1:71247/236‑1 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAAt < 1:633113/176‑1 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAAt > 2:633113/1‑176 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGa > 1:75041/1‑190 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGa < 2:75041/190‑1 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAgg > 1:163566/1‑203 (MQ=255)
tGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAgg < 2:163566/203‑1 (MQ=255)
cccccGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAgg > 2:1022872/1‑146 (MQ=255)
cccccGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAgg < 1:1022872/146‑1 (MQ=255)
cccccGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCCATCCCTTTAAGCCAGACGCTCCAGAAATGTAGAAAAATGCCGTAACTACAAAAGTATGTGAAATAGACg > 2:625047/1‑239 (MQ=255)
cccccGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGCATGTGAAATAGCCg > 1:632298/1‑239 (MQ=255)
cccccGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCCCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGGTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCg > 2:61213/1‑239 (MQ=255)
ccAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGcc < 2:552860/238‑1 (MQ=255)
aGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCaa < 2:156726/235‑1 (MQ=255)
ggCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCgc > 2:242220/1‑239 (MQ=255)
gACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGcc < 1:739253/195‑1 (MQ=255)
gACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGcc > 2:739253/1‑195 (MQ=255)
aCAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGt > 1:202952/1‑239 (MQ=255)
tgtCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGcccc < 2:1047662/105‑1 (MQ=255)
tgtCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGcccc > 1:1047662/1‑105 (MQ=255)
tgtCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAgg < 1:1030604/115‑1 (MQ=255)
tgtCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAgg > 2:1030604/1‑115 (MQ=255)
gcagTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCCCCAGAAAGGGAGAAAAATGCCGTAACTAAAAAAGGATGTGAAATAGCCGAGCGCCAACCCGCGCGAGGATTGCAAAACCATGAg > 1:1105730/1‑238 (MQ=255)
aggggcAGCACGCGCAAGGCGGAAATCAGGGGGGAAGGGTCCCTGACGCGGGGCCCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGGCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCa < 2:1134078/227‑1 (MQ=255)
agTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGa > 1:1032252/1‑148 (MQ=255)
agTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGa < 2:1032252/148‑1 (MQ=255)
cAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAAt > 2:33445/1‑129 (MQ=255)
cAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAAt < 1:33445/129‑1 (MQ=255)
gCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGaaa < 2:80214/188‑1 (MQ=255)
gCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGaaa > 1:80214/1‑188 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGa > 2:759634/1‑145 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGa < 1:759634/145‑1 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTAtg > 2:941570/1‑178 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTAtg < 1:941570/178‑1 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagga > 1:271981/1‑239 (MQ=255)
cgcAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCagga > 2:1038196/1‑239 (MQ=255)
aGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCg < 2:202952/239‑1 (MQ=255)
aGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGGCAGGAGGCg < 1:199427/239‑1 (MQ=255)
aaTCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCt < 2:588249/239‑1 (MQ=255)
gCAAACGCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCCGCGCGTGGATTGCACAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGTGGCAAGTTGAAAAATAAGa > 2:579092/1‑239 (MQ=255)
aaaCGCCCGAGGAAACGGGCAACCAGCCCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAGCCCGCGCGTGGATTGCAAAACCATGAGTCCCGCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGa < 1:238430/237‑1 (MQ=255)
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GCGGGAACTGCTTTTGCCACGTATTCGCCAGTGCATCGGTCAACGGTACCAGTGGTGAGAAAAAGAGGTTAAAGCCAATCATCACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGTGCCAGCACGCGCAAGGCGGAAATCAGGCGGGAAGGATCGCTGACGCGGGGCGCGATGAGCAAACTCCCGAGGAAACGGGCAACCAGACCTGCCCCCAATAACAGGCCGATGGTTTCTGGCGTTAAACCAATCCCTTTAAGCCAGACGCTCCAGAAAGGTAGAAAAATGCCGTAACTAAAAAAGTATGTGAAATAGCCGAGCGCCAACCAGCGCGTGGATTGCAAAACCATGAGTCCCTCCCGTCAGGAGGCGTTAGTCTGGGGTTAATCGAATGTTGGTGCAAGTTGAAAAATAAGA > NC_000913/2667468‑2667913
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
