Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,183,048 |
T→G |
L191F (TTA→TTC) |
potC ← |
spermidine/putrescine ABC transporter permease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,183,048 | 0 | T | G | 96.9%
| 415.8
/ 0.2
| 128 | L191F (TTA→TTC) | potC | spermidine/putrescine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (0/4); new base G (63/61); total (63/65) |
| Fisher's exact test for biased strand distribution p-value = 1.19e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 128 total aligned reads displayed.
CTTTGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTTAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTCGCCGCTTCC > NC_000913/1182951‑1183144
|
cTTTGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGaa < 1:1388564/100‑1 (MQ=255)
tttGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAac < 1:833043/100‑1 (MQ=255)
tttGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAac < 2:2967534/100‑1 (MQ=255)
tttGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAac < 2:2107374/100‑1 (MQ=255)
ttGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAaca > 2:1975639/1‑100 (MQ=255)
ttGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAaca > 2:3783149/1‑100 (MQ=255)
tGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTTAacac < 1:1069041/100‑1 (MQ=255)
aTCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCCTCGACAGGGTAAAGCTGAACACCCAGc > 1:3540179/1‑100 (MQ=255)
aTCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGc < 1:2487466/100‑1 (MQ=255)
aTCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGc > 1:2160933/1‑100 (MQ=255)
tCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGcc < 1:1248628/100‑1 (MQ=255)
cGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGccc > 1:2355587/1‑100 (MQ=255)
gAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCccg < 1:1740192/100‑1 (MQ=255)
aTAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCccgcc > 2:3672566/1‑100 (MQ=255)
tAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAATCTTAACACCCAGCccgccg < 2:3095363/100‑1 (MQ=255)
tAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCccgccg > 1:3457481/1‑100 (MQ=255)
aaTTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCgccgcc < 2:2630504/100‑1 (MQ=255)
aaTTTTTAACGGCAGAATTGCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCgccgcc < 2:859376/100‑1 (MQ=255)
tttttAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCAc < 2:370591/100‑1 (MQ=255)
ttttAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCAcc < 2:927954/100‑1 (MQ=255)
ttAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCCCACCGTACATCGACAGGGTAAAGCGGAACACGCAGCCCGCCGCCACCGc > 2:3358078/1‑100 (MQ=255)
aCGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTgg > 1:3870459/1‑100 (MQ=255)
cGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTTAACACCCAGCTCGCCTCCACCGCTGGc < 2:3876225/100‑1 (MQ=255)
cGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGc > 1:615969/1‑100 (MQ=255)
cGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCGGGc > 2:2303783/1‑100 (MQ=255)
cGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCCTCCATCAACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGc > 2:2763975/1‑100 (MQ=255)
ggCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCa > 2:2398980/1‑100 (MQ=255)
ggCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCa < 1:1447208/100‑1 (MQ=255)
gCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCAt < 2:3423317/100‑1 (MQ=255)
gCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCAt > 1:510791/1‑100 (MQ=255)
gCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCAt > 2:2328144/1‑100 (MQ=255)
cAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCAtt > 2:261652/1‑100 (MQ=255)
aGAATTGCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTg < 2:3454379/100‑1 (MQ=255)
gAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGc > 2:2367824/1‑100 (MQ=255)
aaTTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGcc < 2:1797043/100‑1 (MQ=255)
aTTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCa > 1:2697062/1‑100 (MQ=255)
aTTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCa < 2:1261226/100‑1 (MQ=255)
tttCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAg > 1:3019998/1‑100 (MQ=255)
cATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTgg > 1:579353/1‑100 (MQ=255)
ntAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGc > 1:225533/2‑100 (MQ=255)
aTAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGc < 2:1941080/100‑1 (MQ=255)
aTAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGc < 1:2492262/100‑1 (MQ=255)
tAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCa > 2:3109822/1‑100 (MQ=255)
tAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCa < 1:849276/100‑1 (MQ=255)
tAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCa < 1:3157618/100‑1 (MQ=255)
aaCTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAg < 1:2765966/100‑1 (MQ=255)
aaCTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGGGGCAg > 2:2118668/1‑100 (MQ=255)
ttGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAAt < 1:1711692/100‑1 (MQ=255)
tGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATg > 1:2178806/1‑100 (MQ=255)
ggTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACCGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGa > 2:1297175/1‑100 (MQ=255)
ggTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGa < 2:1988723/100‑1 (MQ=255)
gTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGAt > 1:4033217/1‑100 (MQ=255)
gTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGAt > 2:357796/1‑100 (MQ=255)
gTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGAt < 1:4059997/100‑1 (MQ=255)
tCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGAtt < 2:481566/100‑1 (MQ=255)
ccGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGAttt > 2:482729/1‑100 (MQ=255)
gTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTc > 1:1786404/1‑100 (MQ=255)
tGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCg < 2:645979/100‑1 (MQ=255)
tGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCg < 1:2444733/100‑1 (MQ=255)
cgaacgaaGACACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAg < 1:233375/100‑1 (MQ=255)
cgaacgaaGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAg > 2:2296374/1‑100 (MQ=255)
aacgaaGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGaa < 2:3546286/100‑1 (MQ=255)
acgaaGAAACGACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCGGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAAt < 1:2799971/100‑1 (MQ=255)
cgaaGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATg < 2:2319362/100‑1 (MQ=255)
cgaaGAAACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATg > 2:2654946/1‑100 (MQ=255)
gaagaaACTACCACATCGTCCATCGACAGGGTAAAGCTGAACCCCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATgg < 2:567630/100‑1 (MQ=255)
agaaACTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTa < 2:3485404/100‑1 (MQ=255)
aaCTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAAt < 2:2017159/100‑1 (MQ=255)
aaCTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAAt < 2:3081980/100‑1 (MQ=255)
aaCTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAAt > 2:2836664/1‑100 (MQ=255)
cTACCACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTc < 2:2065595/100‑1 (MQ=255)
ccACATCGTCCATCGACAGGGTAAAGCTTAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCt < 2:3387720/100‑1 (MQ=255)
ccACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCt < 2:1798155/100‑1 (MQ=255)
ccACATCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCt > 1:3695842/1‑100 (MQ=255)
caTCGTCCATCGACAGGGTAAAGCTGAACACGCAGCCCGCCGCCACCGCTGGCATTGCCGGTGGCAGAATGAGTTTACGCAGAATGGTAAATTCGCTGGc < 2:1799672/100‑1 (MQ=255)
caTCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGc > 2:1107513/1‑100 (MQ=255)
caTCGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGc < 2:2288636/100‑1 (MQ=255)
cGTCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCAcc < 2:3622394/100‑1 (MQ=255)
tCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCga > 1:1147440/1‑100 (MQ=255)
tCCATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCga < 2:3768145/100‑1 (MQ=255)
cATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCgaga > 1:1626464/1‑100 (MQ=255)
cATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCgaga > 1:2118786/1‑100 (MQ=255)
cATCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGAGGCAGAATGATTTTTCCCAGAATGGTAAATTCGCTGGCACAgaga > 1:1626685/1‑100 (MQ=255)
aTCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGAt < 1:1094767/100‑1 (MQ=255)
tCGACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATc < 1:2322545/100‑1 (MQ=255)
ngACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCACAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCt > 2:477690/2‑100 (MQ=255)
cGACAGTGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGAGCt > 2:1195693/1‑100 (MQ=255)
gACAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCtt > 2:2999889/1‑100 (MQ=255)
cAGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTc < 2:1176942/100‑1 (MQ=255)
agtgTAAAGCTGAACACCCAGCCCGCCTCCACCGCTGGCATTGCCAGTGGCATAATGATTTTTCGCTGAATGGTAAATTCGCTGGCACCGAGATCTTTcg < 2:3320584/97‑1 (MQ=255)
aGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcg < 1:2880006/100‑1 (MQ=255)
aGGGTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcg < 1:2331981/100‑1 (MQ=255)
gggTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcgc > 1:3285083/1‑100 (MQ=255)
ggTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcgcc < 2:622728/100‑1 (MQ=255)
gTAAAGCTGCACACCCAGCCCGCCGCCACCGCTGGCATTGCAAGTGGCAGAATGATTTTTCGCAGATTAGTAAATTCGCTAGCACCGAGATCTTTcgccg < 2:221895/100‑1 (MQ=255)
gTAAAGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcgccg > 2:3782852/1‑100 (MQ=255)
tAAAGCTGAACATCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATGTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTcgccgc > 2:543898/1‑100 (MQ=255)
aGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCTTTTTTTTTTAAATTCGCTGGCACCGAGATCTTTCGCCGCCTc > 2:901525/1‑100 (MQ=255)
aGCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTCGCCGCTTc > 1:2948536/1‑100 (MQ=255)
gCTGAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTCGCCGCTTcc > 2:1016919/1‑100 (MQ=255)
|
CTTTGACCATCGAATAAATTTTTAACGGCAGAATTTCATAACTTGGTCCGGTGACGAACGAAGAAACTACCACATCGTCCATCGACAGGGTAAAGCTTAACACCCAGCCCGCCGCCACCGCTGGCATTGCCAGTGGCAGAATGATTTTTCGCAGAATGGTAAATTCGCTGGCACCGAGATCTTTCGCCGCTTCC > NC_000913/1182951‑1183144
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
