Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,571,816 |
T→G |
D77A (GAT→GCT) |
gadB ← |
glutamate decarboxylase B, PLP‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,571,816 | 0 | T | G | 97.9%
| 470.5
/ ‑2.1
| 142 | D77A (GAT→GCT) | gadB | glutamate decarboxylase B, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base G (62/77); total (64/78) |
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 142 total aligned reads displayed.
ATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCATTGATA > NC_000913/1571719‑1571911
|
aTGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCCTTGTCGATCCAGTTTTTGTTAATGGATAAAGcc < 2:365431/100‑1 (MQ=255)
tGCCACAGCTCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTCATGGATAAAGCCa < 2:2570168/100‑1 (MQ=255)
gCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCAt > 2:2435198/1‑100 (MQ=255)
cacaGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCa < 1:818806/100‑1 (MQ=255)
caGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTACGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAAt > 1:4036109/1‑100 (MQ=255)
tCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTtgt > 1:166513/1‑100 (MQ=255)
tCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTtgt < 1:1637712/100‑1 (MQ=255)
cGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTtgtg < 1:37678/100‑1 (MQ=255)
cGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTtgtg > 2:2054863/1‑100 (MQ=255)
ggCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTgg < 1:2473239/100‑1 (MQ=255)
ggCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTgg < 1:1861184/100‑1 (MQ=255)
ggCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTgg > 1:1428464/1‑100 (MQ=255)
gCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGa < 1:3963729/100‑1 (MQ=255)
cgaCCATATTTACGCAACGCAGGTCGGTGGCTGCGGATTGCGGATATTCTTCTTGGTCGGTCCAGTTGTTGTTAAGGGGGAAAGCCATCAATTTGTGTAc < 2:3975314/98‑1 (MQ=14)
aaCCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACa < 2:2756052/100‑1 (MQ=255)
atatTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACAtttt < 1:802854/100‑1 (MQ=255)
tatTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtc < 1:363765/100‑1 (MQ=255)
atTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtcg > 2:1703365/1‑100 (MQ=255)
atTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtcg < 2:3931948/100‑1 (MQ=255)
atTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtcg > 1:569457/1‑100 (MQ=255)
atTTACGCAACGCAGGTCGATGGCTGCGAATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtcg < 2:1532794/100‑1 (MQ=255)
tttACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTtcgt > 1:3200302/1‑100 (MQ=255)
tACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGAGCCAGTTTTTGTTAGTGGATCAAGCCATCAATTTGTGGACATTTtcgtcg > 2:3941112/1‑100 (MQ=17)
acgcaacgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTcgtcgt > 1:3316924/1‑100 (MQ=255)
cgcaacgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCgtcgtc < 1:138974/100‑1 (MQ=255)
gctacgcaGTTCTATGGCTTCTGATTGCGAATATTCTTATTTGTCGATCCACTTTTTTTTCCTGCATAAAGCCATCAATGTGTGGACATTTTCGTCGTcc < 2:3983955/97‑1 (MQ=255)
gcaacgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCgtcgtct < 2:3124206/100‑2 (MQ=255)
gcaacgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTcc < 1:2325338/100‑1 (MQ=255)
caacgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTccc > 2:3261709/1‑100 (MQ=255)
acgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAg < 2:3158213/100‑1 (MQ=255)
acgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAg > 1:3207419/1‑100 (MQ=255)
cgcaGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAgg > 1:1562967/1‑100 (MQ=255)
cgcaGGACCATGGCGGCGGATTGCCGAGATTCTTCCTGGGCGATCCAGTTTTTGTTAATGAATAAAGCCATCCATTTGTGGACATTTTCGTCGTCCCAgg < 1:3891832/100‑1 (MQ=17)
ggTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCAATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTg > 2:3909346/1‑100 (MQ=255)
tCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCCGTTGTTGTTAATGGATAATGCCATCAATTTGTGGACATTTTCGTCGTCCCGGGTCTGGc < 2:766481/100‑1 (MQ=17)
tCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATCGATAAAGCCATCAATTTGTGGACATTTTCGTCGTTCCAGGTCTgac < 2:3708391/100‑3 (MQ=14)
tCGATGGCTGCGGATTGCAGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGc < 2:1217294/100‑1 (MQ=255)
cGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCa > 1:3230399/1‑100 (MQ=255)
cGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCa < 2:2189396/100‑1 (MQ=255)
gATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAg > 2:2910351/1‑100 (MQ=255)
aTGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGa > 1:2873470/1‑100 (MQ=255)
gCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAg > 1:4046243/1‑100 (MQ=255)
cTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTTATGGATAAAGCCATCAATTTGTGGACTTTTTCGTCGTCCCAGTTCTTGCAGAAAGt < 2:3301177/100‑1 (MQ=14)
cTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGt > 2:3431486/1‑100 (MQ=255)
cggattgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGc < 1:3119632/100‑1 (MQ=255)
ggattgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGcc < 1:4005888/100‑1 (MQ=255)
gattgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCa > 1:730687/1‑100 (MQ=255)
tgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGt < 1:1110132/100‑1 (MQ=255)
tgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGt < 2:2218599/100‑1 (MQ=255)
tgcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGt > 2:2005526/1‑100 (MQ=255)
gcggatATTCTTCTTTGTCGATCCAGTTTTTTTTTTTTTTTAAAGCCATCAATTTGTGGACATTTTCGTCTTTTCAGGTTTGGCAGAAAGTGGTCAGGtt > 2:1633423/1‑100 (MQ=14)
gcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAACCTGGCCacttt > 2:3352752/1‑96 (MQ=18)
gcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGtt > 1:1908079/1‑100 (MQ=255)
gcggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGtt > 2:548274/1‑100 (MQ=255)
cggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTc > 1:1278233/1‑100 (MQ=255)
ggctatTCTTTTTTATCGATCCAGTTTGTGTTCATGGATAAAGCCATGATCTTAGTGACATTGTCGTCGTCTCAGGTTTGGGAGAAAGTGGCCAGGTTCt < 2:134532/97‑1 (MQ=9)
ggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCt > 2:157795/1‑100 (MQ=255)
ggatATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCt < 2:2328395/100‑1 (MQ=255)
atatTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGa < 2:1332601/100‑1 (MQ=255)
atatTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGa < 2:3082515/100‑1 (MQ=255)
tatTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGAc < 1:3591750/100‑1 (MQ=255)
tatTCTTCTGTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGAc < 1:187201/100‑1 (MQ=255)
atTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACg > 2:1453667/1‑100 (MQ=255)
atTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACg > 1:1769275/1‑100 (MQ=255)
atTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACg < 1:3829/100‑1 (MQ=255)
tcttctTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGac > 2:2504548/1‑99 (MQ=255)
tcttctTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAg < 1:1652090/100‑1 (MQ=255)
tcttctTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAg < 1:1479371/100‑1 (MQ=255)
tcttctTTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAg < 1:2037418/100‑1 (MQ=255)
cttTGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGtt < 2:2900826/100‑1 (MQ=255)
tttGTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTg < 2:3760611/100‑1 (MQ=255)
gTCGATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCa > 1:521695/1‑100 (MQ=255)
gATCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTAACGAGCGTTGCCATCa > 1:3353083/1‑100 (MQ=255)
aTCCAGTTTTTGTTTTTTTTTAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCaa > 2:1734967/1‑100 (MQ=14)
aTCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCaa < 2:1622233/100‑1 (MQ=255)
aTCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCaa < 2:2589336/100‑1 (MQ=255)
tCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAg > 1:4013142/1‑100 (MQ=255)
tCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAg > 1:3099381/1‑100 (MQ=255)
tCCAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAg < 1:1237797/100‑1 (MQ=255)
ccAGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGa < 1:2817087/100‑1 (MQ=255)
aGTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGata < 1:322538/100‑1 (MQ=255)
gTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGatat > 2:1006184/1‑100 (MQ=255)
gTTTTTGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGatat > 2:359350/1‑100 (MQ=255)
tttttGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGAtata < 2:1882607/100‑1 (MQ=255)
ttttGTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATaa > 1:2084323/1‑100 (MQ=255)
gTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCg < 2:1068506/100‑1 (MQ=255)
gTTAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCg > 1:2179391/1‑100 (MQ=255)
ttAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGt < 2:1769470/100‑1 (MQ=255)
tAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTc > 2:2340518/1‑100 (MQ=255)
tAATGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTc < 1:2089600/100‑1 (MQ=255)
aaTGGATAAATCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCa > 2:149991/1‑100 (MQ=255)
aTGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCAt < 1:2818274/100‑1 (MQ=255)
aTGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCAt < 1:1172399/100‑1 (MQ=255)
tGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCAtt < 1:1594075/100‑1 (MQ=255)
tGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCAtt > 1:374674/1‑100 (MQ=255)
tGGATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCAtt < 1:1103610/100‑1 (MQ=255)
ggATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATCATTCGTCATTg > 2:299744/1‑100 (MQ=255)
gATAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCATTGa > 1:2040093/1‑100 (MQ=255)
aTAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCATTGAt < 1:3534684/100‑1 (MQ=255)
tAAAGCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCATTGATa > 1:358619/1‑100 (MQ=255)
|
ATGCCACAGATCGGCAACCATATTTACGCAACGCAGGTCGATGGCTGCGGATTGCGGATATTCTTCTTTGTCGATCCAGTTTTTGTTAATGGATAAATCCATCAATTTGTGGACATTTTCGTCGTCCCAGGTCTGGCAGAAAGTGGCCAGGTTCTGACGAGCGTTGCCATCAAGATATAATTCGTCATTGATA > NC_000913/1571719‑1571911
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
