Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F9 I0 R1
|
58 |
62.8 |
1514203 |
84.7% |
1282529 |
220.3 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑C‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATA > NC_000913/4296142‑4296624
|
GATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGCCGGATAAGCCGTTTACGC‑CG‑CATCCG > M01186:129:000000000‑A5M8V:1:1101:25842:7894/1‑250 (MQ=17)
ATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTCTTAGGTCGGATAAGGCGTTTACGC‑CG‑CAACCGACATCAATGCCTGATGggc > M01186:129:000000000‑A5M8V:1:1107:28332:11722/1‑247 (MQ=16)
gcgtattatcagggacacgccagacatgccaattggcttattttgtgtggatttgtaggcgGGATAAGGAGTTTAC‑GCCGCATCCGACATCAACGCATGATGCAACGCTTAACGCGTCTTATCAGGCTTACGCCAGACAGCGCAATAGCATGATTTAGCGTGATTTTGTCGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAAC < M01186:129:000000000‑A5M8V:1:2103:21378:8526/189‑1 (MQ=0)
gtgttatcgggtctgCGCCAGACAGCCCAATAGTCTGATTTAGCGTGATTTTGT‑AGGTCGTATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGTCGCTTAACTCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCG < M01186:129:000000000‑A5M8V:1:2111:22465:15674/235‑1 (MQ=3)
GGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGCTTTTGTAGGTCGGATCAGGCGTTTACGC‑CG‑CATCCGCCATCAATGCCTTGTGCGACGCTTGCCGCGACTTATCAGGCCTATCTTACCCGGTGGTTAATT > M01186:129:000000000‑A5M8V:1:1114:4583:11275/1‑251 (MQ=3)
GGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGGCAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGGGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACGTTTGGTTAATT > M01186:129:000000000‑A5M8V:1:2101:27270:21407/1‑251 (MQ=3)
GGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATT > M01186:129:000000000‑A5M8V:1:2105:25117:11889/1‑251 (MQ=24)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGTCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGCCGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGAGCAATAGCCTGCTTTAGCGGGGTTTTTTAGGTCGGATAAGGAGTTTA‑‑CGCGCCATCCGACATCAATGCCTGCTTCGACGCTTGCCGCGGCTTATCAGGCCATTCTTAACCGCTGGTTAATTTTTCA > M01186:129:000000000‑A5M8V:1:2111:28569:13644/1‑251 (MQ=13)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGAGGCTTGCCCCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCA > M01186:129:000000000‑A5M8V:1:1109:17145:16510/1‑251 (MQ=32)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCATGATTTTGTATGCCGGATAAGCCGTTTACGC‑CG‑CATCCGACATCAATACCTGATGCGCCGCTTGCCGCTTCTTATCAGGCCTATCTTACCCGTTGGTTCATTTTTCA > M01186:129:000000000‑A5M8V:1:2110:8227:9321/1‑251 (MQ=13)
CCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTCCAAAT > M01186:129:000000000‑A5M8V:1:1103:28155:10613/1‑251 (MQ=27)
GCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCA > M01186:129:000000000‑A5M8V:1:2107:20186:27107/1‑250 (MQ=48)
gcatgGCCTGATTTAGCGTTATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGGTTAACGAGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAC < M01186:129:000000000‑A5M8V:1:1110:14463:14423/245‑1 (MQ=51)
caagtgccttatttagcttgattcggtgtggcggatagggcgtgtatccccCATCCGACATCAACGCCTGATTCGCCGATTAACGCGTCTTATCAGTGCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTTTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACTCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACGCC < M01186:129:000000000‑A5M8V:1:2111:15597:13129/200‑1 (MQ=46)
CTGATTTGGCGTGATTGTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCCACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATC < M01186:129:000000000‑A5M8V:1:1108:26313:13021/251‑1 (MQ=60)
TTTAGCGTGATTTTGG‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAC < M01186:129:000000000‑A5M8V:1:1106:11688:13770/251‑1 (MQ=60)
tttgggtgtatttggtaggcgggttacagcctttttgcagaatccaccatgaacggctgactccACGCTTAATGCGTCTTTTCAGGGCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTGGTAGGTCGGATTAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAC < M01186:129:000000000‑A5M8V:1:2113:16274:23810/187‑1 (MQ=60)
tgggggtATTTTGT‑AGGGCGGATAAGGGGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCC < M01186:129:000000000‑A5M8V:1:1108:23254:9652/244‑1 (MQ=60)
TTTTGT‑AGGTCGGATAAGGGGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGGTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:2106:21112:23286/251‑1 (MQ=60)
TTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGACTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:2109:25122:7950/251‑1 (MQ=60)
TTTTGT‑AGGTCGGATAAGGCGTTTAA‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:1102:8401:6102/251‑1 (MQ=60)
TTTTGT‑AGGGCGGATAAGGCTTTTAA‑GCCGCATCCGACATCAACGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:2108:16823:12562/251‑1 (MQ=60)
TTTTGG‑AGGTCGGATAAGGCGTTTAG‑GCCGCATCCGACATCAACGCCTGCTGCGACGCTTAACGCGTCTTATCAGGGCTACGCAAGACAGCGCAATAGCCTGATTTAGCTGTATTTTGTAGGTCGGAGAAGGTGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:1114:7044:20040/251‑1 (MQ=60)
TTTGTGAGTTCGGATAAGTGGTTTAG‑GCCGCATCCGACATGAACGCCTGATGCGACGCTTAACTCGTTTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:2111:15941:12558/251‑1 (MQ=60)
tgtttgagggcggagtaggcgtttaaggccgatgCGACATCAACGCCTGGTGCGAAGGTTAACGGGTCTTATAAGGCCTACGCCAGACAGCGCAATAGCCTTATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAC < M01186:129:000000000‑A5M8V:1:1110:14621:10352/217‑1 (MQ=60)
tggagggtGGATAAGGCTTTTTT‑GCCGCATCCGAACTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCACGTAAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGC < M01186:129:000000000‑A5M8V:1:2104:12063:21896/243‑1 (MQ=60)
GATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTAACAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAGCCCTTCCATAC < M01186:129:000000000‑A5M8V:1:1104:23064:10522/239‑1 (MQ=60)
GGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCTTACAGCTCAGGTTCAACCAA > M01186:129:000000000‑A5M8V:1:1105:19083:11711/1‑251 (MQ=60)
GCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCCAACCCGGTATCAAACCCTTCAATACAGTTCAGGTTCAACaacg > M01186:129:000000000‑A5M8V:1:1101:15377:16299/1‑247 (MQ=60)
TTTATCGCCGCATCCTACAGCAACGCCTGATGAGACGCTGAACGGGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGC < M01186:129:000000000‑A5M8V:1:2114:17273:11296/251‑1 (MQ=60)
ctgcctgaaacgctagatgtgacgcttaactggtcttggCAGGCCTACGCGAAAGAGCGCAATAGCCTGATTTAGGGTGATTTTGTAGGTCGTATAAGGCGTTTACGC‑CG‑CATCCGAAATTAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCT < M01186:129:000000000‑A5M8V:1:1112:24297:23504/212‑1 (MQ=60)
ccgacatcaacgccttacgcagcgcttgatgtgtttttTCAGGTCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCT < M01186:129:000000000‑A5M8V:1:2113:24349:7239/213‑1 (MQ=60)
CCGGCATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCT < M01186:129:000000000‑A5M8V:1:1103:6657:6928/251‑1 (MQ=60)
ACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCCCACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTAT > M01186:129:000000000‑A5M8V:1:2107:19734:16022/1‑251 (MQ=60)
ctaAACGCCGGATGCGACGCTTAGCGCGTTGTATCAGTCCTACGCCAGACAGCGCAATAGCCGGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACTCCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTC < M01186:129:000000000‑A5M8V:1:1113:27135:15285/248‑1 (MQ=60)
CTCAACGCCTGATGCAGCGTCTAACGCGTCTTAGTCGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGTTTTGGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTC < M01186:129:000000000‑A5M8V:1:2113:14925:25801/251‑1 (MQ=60)
CGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCT > M01186:129:000000000‑A5M8V:1:2102:22141:21367/1‑250 (MQ=60)
GCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTT > M01186:129:000000000‑A5M8V:1:2107:19351:14329/1‑249 (MQ=60)
CTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTCTCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGTTAAAACCTTCTT > M01186:129:000000000‑A5M8V:1:2102:15649:5167/1‑251 (MQ=60)
TTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTC < M01186:129:000000000‑A5M8V:1:1104:13113:19673/251‑1 (MQ=60)
TCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGCTATCAAACCCTTCCATAAAGGTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCATTTA > M01186:129:000000000‑A5M8V:1:1108:15897:28570/1‑251 (MQ=60)
TCGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCC < M01186:129:000000000‑A5M8V:1:2102:19538:24677/251‑1 (MQ=60)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGTTCAGGTTCAACCAGTGC > M01186:129:000000000‑A5M8V:1:1107:14792:16241/1‑192 (MQ=60)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGCTTAAGAAatcccttc > M01186:129:000000000‑A5M8V:1:1109:24008:13740/1‑242 (MQ=60)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTAAGGTTCAACCAGGGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTC > M01186:129:000000000‑A5M8V:1:2110:9109:20211/1‑250 (MQ=60)
ACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATAATGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGACCATCATTC > M01186:129:000000000‑A5M8V:1:1102:12823:4767/1‑250 (MQ=60)
cggccggGCAATTGCCTGATTTAGCGTGATTTTGGAGGTCGGATAAGGCGTTTACCC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCGTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCC < M01186:129:000000000‑A5M8V:1:2105:7766:19901/244‑1 (MQ=60)
ATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTACCC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGA < M01186:129:000000000‑A5M8V:1:2102:16534:12197/251‑1 (MQ=60)
ttatttgggtgggCGGATAAGGCTTTTACGC‑CG‑CATCCGACATCAATTCCTGATGCCACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAA < M01186:129:000000000‑A5M8V:1:1109:24121:6658/238‑1 (MQ=60)
TGATTTTGTAAGTCGGATTAGGCGTTTACCC‑CG‑CATCCGACAATAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAA < M01186:129:000000000‑A5M8V:1:1112:22351:11816/251‑1 (MQ=60)
ATTTTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAAT > M01186:129:000000000‑A5M8V:1:2103:13477:21591/1‑251 (MQ=60)
TTGTAGGTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGC < M01186:129:000000000‑A5M8V:1:2103:13258:23819/251‑1 (MQ=60)
GTCGGATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTACCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCCCACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGC < M01186:129:000000000‑A5M8V:1:2110:16063:22558/250‑1 (MQ=60)
GTCGGATAAGGCATTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGC < M01186:129:000000000‑A5M8V:1:1110:18675:4022/250‑1 (MQ=60)
GATAAGGCGTTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCATCGCCTTTTGCTTGTTCTTCTCGCTAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTCCGT > M01186:129:000000000‑A5M8V:1:1105:23763:6178/1‑251 (MQ=60)
ATAAGGCGTTTAACC‑CG‑CCTCCGGCATCAATGCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTGCTCGATAAAACCTGCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGT < M01186:129:000000000‑A5M8V:1:2102:6131:14543/250‑1 (MQ=60)
TTTACGC‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCTCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATA > M01186:129:000000000‑A5M8V:1:1102:17808:12035/1‑250 (MQ=60)
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GATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGT‑AGGTCGGATAAGGCGTTTAT‑GCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTA‑‑C‑CG‑CATCCGACATCAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTGAAATA > NC_000913/4296142‑4296624
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
