Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F1 I0 R1 31 167.4 3047894 97.2% 2962552 264.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,528,108 T→G 49.1% L547R (CTG→CGG)  yrfF → putative RcsCDB‑response attenuator, inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,528,1080TG49.1% 3.0 / 262.0 150L547R (CTG→CGG) yrfFputative RcsCDB‑response attenuator, inner membrane protein
Reads supporting (aligned to +/- strand):  ref base T (48/28);  new base G (36/37);  total (84/66)
Fisher's exact test for biased strand distribution p-value = 1.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01

Only 100 of 150 total aligned reads displayed.

AAGCAGTTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCATAT  >  NC_000913/3527823‑3528390
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                          
aaGCAGTTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGa                                                                                                                                                                                                                                                                                         >  1:303185/1‑289 (MQ=255)
      ttAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATaa                                                                                                                                                                                                                                                                                      >  1:1013927/1‑286 (MQ=255)
       tAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCGCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAAcc                                                                                                                                                                                                                                                                                    <  2:1261284/287‑1 (MQ=255)
          tCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCtggtg                                                                                                                                                                                                                                                                               <  2:34546/289‑1 (MQ=255)
                        cgaaaCCGGAAGATGAATCACGCGTCAGTGGCTCATTACTGTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGA‑ATTTATGTTCTGCCAAAGATGACTGTGAGCGACTGAAAAATGCGCTGTTAAATCTCGGCAACAGTAAAGACTGGAACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTAGTACGCCCGGTGAGTGCGAAATCGCGGGATAACCTGGTGGCAACCTCCAc                                                                                                                                                                                                                                                                    <  2:1001117/284‑1 (MQ=255)
                                gAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTa                                                                                                                                                                                                                                                         >  2:150157/1‑289 (MQ=255)
                                 aaGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGCGTGCGGAATAGCTGGATCACCTGGTGGCAACCTCCACCGCGACGTGTa                                                                                                                                                                                                                                                         >  1:1236780/1‑288 (MQ=255)
                                 aaGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTa                                                                                                                                                                                                                                                         >  1:983694/1‑288 (MQ=255)
                                  ataTGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAAGCCGGCATGGTATTGCTTGATGATTTTGTCGACATTTTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATc                                                                                                                                                                                                                                                       <  2:42893/287‑1 (MQ=255)
                                     tGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCAc                                                                                                                                                                                                                                                     >  1:102343/1‑288 (MQ=255)
                                                     gCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGa                                                                                                                                                                                                                                     <  1:1221671/288‑1 (MQ=255)
                                                         cATTACGTTCAGCAATTCAAACATCCGGCCTGGTATTGCTTGATGATTTTGGCGACCTTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAACGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGCAGCTCGATGGCGTGAATGTGTTCTTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCCCCGCGCCGTTTCTCACGCCTGAAACGGcgcgctcgg                                                                                                                                                                                                                                 >  1:1142814/1‑283 (MQ=255)
                                                           ttgcGTTCAGCAATTAATAAATCCGGCATGTTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCAACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAGACGCGCCAACGCCGGGAAGCTCGAAGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGcac                                                                                                                                                                                                                              <  1:448873/286‑1 (MQ=255)
                                                           ttACGGTCAGCAATTCAAAAATCCGGCATGGTATTGCTGGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGcac                                                                                                                                                                                                                              <  1:843412/289‑1 (MQ=255)
                                                           attagTTCAGCAATTCAAAAATCCGGAAGGGTATTGTGTGATGGTTTGGGACGCATGTGACTGAAGACATCGG‑ATTTGTGTTCTGCGAAAGAGGACGGGTTGCGACGGAAACATGCGCTGGTGAATCTCGGCACAAGTAAATAGCGGGACGCGCTGGTGACACGGGCTAACGCCGGGAAGGTCGACGGCGTGAATGGGCTATTACGCCCGGTGACGGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATTAAACCGCGCGAGCGGcac                                                                                                                                                                                                                              <  2:1055211/285‑1 (MQ=255)
                                                                ttCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGCGAGTGCGGAATCGCGGGATGACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCAGAAAACGGCGCGAGCGGCACAAta                                                                                                                                                                                                                          >  1:1480874/1‑287 (MQ=255)
                                                                ttCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCCCGATGGCGTGACTGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTTCACCCCGCCGTTTACCACGCATGCAACGGCGCGAGCGGCACACTCa                                                                                                                                                                                                                         >  1:39068/1‑289 (MQ=255)
                                                                 tCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCCCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATc                                                                                                                                                                                                                          >  1:1038521/1‑287 (MQ=255)
                                                                 tCAGCAATTAAAAAATCCTGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGCGACGCGCTGGTAAAACGCGCCAACGCCGCGAAGCTCGATTGCGGCAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAAGCTGGTGGCAATCGCCACCGCGCCGTTTATCACGCATGAAACGTCGCGAGGGGCACTATCa                                                                                                                                                                                                                         <  2:827374/288‑1 (MQ=255)
                                                                   aGCAATTTAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTa                                                                                                                                                                                                                      >  1:34194/1‑289 (MQ=255)
                                                                    gCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGACAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCCTGAAACGGAGCGAGCGGCACAATCACTaa                                                                                                                                                                                                                     >  1:718253/1‑289 (MQ=255)
                                                                             aaaTCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCg                                                                                                                                                                                                             >  1:1291901/1‑288 (MQ=255)
                                                                                                 tgatgaTTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAGCCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGAtt                                                                                                                                                                                        >  2:1338212/1‑289 (MQ=255)
                                                                                                  gatgatTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTACACCGCCCCGTTTAGCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCCGATTCCCGATTg                                                                                                                                                                                       >  2:598878/1‑289 (MQ=255)
                                                                                                    tgatTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTc                                                                                                                                                                                     >  1:705484/1‑289 (MQ=255)
                                                                                                    tgatTTTGGCGACATTGTACTGAAGACAGCGG‑ATGTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATATCGGCAACAGTAAAGACTGGGACGCGCTGGTAACACGCGCAAACGCCGGGAAGATCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGTCAACTTACACCGAGACGTGTATCACGCATGACACGGCGCACGCGGAACAATCACCAAACAGTACGGACCACGGCCGATTCCTGATCGta                                                                                                                                                                                     >  2:193763/1‑288 (MQ=255)
                                                                                                     gatTTTGGCGGCATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTAAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCa                                                                                                                                                                                    <  1:1156106/289‑1 (MQ=255)
                                                                                                     gatTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCa                                                                                                                                                                                    <  2:983694/289‑1 (MQ=255)
                                                                                                      atttggacaaCATTATACTGAAGACAGAGG‑ATTCATGTTCTGCCAAAGATGACAGTGTGAGACTGAAAAATGCGGTGGTCAAGCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATCACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCa                                                                                                                                                                                    <  1:394408/279‑1 (MQ=255)
                                                                                                           ggcaccATTGTACTGAAGACAGCGG‑TTTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGcgacg                                                                                                                                                                              <  1:280568/284‑1 (MQ=255)
                                                                                                                  ttGTGCTGAAGA‑AGNGGTATTTATGTTCTGCCAAAAATGACTGCGAGCGACTGAAGAATGGGCGAGTGAATCTCGACAACAGTAAAGAGTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCGGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAg                                                                                                                                                                       <  2:1038521/289‑1 (MQ=255)
                                                                                                                  ttGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGcac                                                                                                                                                                                                                              >  1:892868/1‑234 (MQ=255)
                                                                                                                          aaGACAGTGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttg                                                                                                                                                               >  1:1942/1‑289 (MQ=255)
                                                                                                                          aaGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttg                                                                                                                                                               >  2:895154/1‑289 (MQ=255)
                                                                                                                          aaGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTttg                                                                                                                                                               >  2:56577/1‑289 (MQ=255)
                                                                                                                            gACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGACTttgtt                                                                                                                                                             >  1:441404/1‑289 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGCTTCCTGATTGTCAGCCACGAAGGCAACGATTTTGTTGa                                                                                                                                                           >  2:924678/1‑288 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGa                                                                                                                                                           >  1:319030/1‑288 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATCCCTGATTGTCAGCGACGAAGGCAGCGATTTTGCTGa                                                                                                                                                           >  1:220645/1‑288 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGa                                                                                                                                                                                                                                     <  1:881725/214‑1 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGa                                                                                                                                                                                                                                     >  2:881725/1‑214 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGa                                                                                                                                                           >  1:1267103/1‑288 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGAt                                                                                                                                                          >  1:1199660/1‑289 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGAt                                                                                                                                                          >  1:1279768/1‑289 (MQ=255)
                                                                                                                               aGCGG‑ATTTATGTTCTGCCAAAGATGACGGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCa                                                                                                                                                                                                                         <  2:876945/226‑1 (MQ=255)
                                                                                                                               aGCGG‑ATTATAGTGCTGCCAATGATTACGGTGTGCGACGGAAAAATTAGCTGGTCAATCACGGCAAAAGTAAAGACTGGGACGAGCTGGTAAAACGCGCCAAGGCCGGGAAGCTCGATGGAGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGAGAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGAt                                                                                                                                                          <  2:951735/289‑1 (MQ=255)
                                                                                                                                  gg‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGAt                                                                                                                                                          <  1:1147280/286‑1 (MQ=255)
                                                                                                                                  gg‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGa                                                                                                                                                           <  1:928582/285‑1 (MQ=255)
                                                                                                                                      tttATGTTCTGCCAAAGATGACGGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGcc                                                                                                                                                     <  1:1352458/288‑1 (MQ=255)
                                                                                                                                               tGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCg                                                                                                                                           >  2:1021006/1‑289 (MQ=255)
                                                                                                                                               tGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCg                                                                                                                                           >  2:304559/1‑289 (MQ=255)
                                                                                                                                               tGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCAGTTTATCACGCATGAAACGGCGCGAGCGGCCCAATCAATAAACAGTACGGCCCCCGGCGGATTCCTGATCGTCCGCGACGAAGGCAGCGATTTCTTTGATCAGCCCTGGCCTTCg                                                                                                                                           >  2:1244589/1‑289 (MQ=255)
                                                                                                                                                 ccAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGc                                                                                                                                         >  1:635788/1‑289 (MQ=255)
                                                                                                                                                   caaGATAGCTGTGTGCTACTGAAACATGCGCTAGCAAAGCTCGGGAAACGGAGAGATTGTGTCGCGCTGGTAAGACAGGGCATCGCCCGGAATGTCGATGGCGTGAATGTGTTAGTACGCCCGGCGTGTTCGGAATCGCTGGATAACCTGGTGGCAACTTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCTGCGGATTGCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCAt                                                                                                                                       <  2:1172843/288‑1 (MQ=255)
                                                                                                                                                   aaaactGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCATCAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCAt                                                                                                                                       <  2:34194/284‑1 (MQ=255)
                                                                                                                                                   aaaaATAACTGTGTGCGACTGAAAAATACGCTGGTCAAACTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAGACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCAt                                                                                                                                       <  1:842534/289‑1 (MQ=255)
                                                                                                                                                   aaaGATGGCTGTGTGAGGCTTAGAAATGCGCAGGTTAAGCTCAGCAACAGTAAAGACTGGGACGCGGGGGTAACACGCGCCAAGGCAGGGAAGCTCGATGGCGTGAATGTGTTATTACGCGCGGTGAGTGCGGAATCGCAGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTGTCACGCATGAAACGGCGCGAGCGGCACAATCACTGAACAGTCCGGCCCCCGGCGGATTCCCGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGGAt                                                                                                                                       <  2:814437/289‑1 (MQ=255)
                                                                                                                                                          actgttgtagACTGAAAAATGCGCTGTGCAATCTCGGCAACAGTAAAGACGGTGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGTTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACtt                                                                                                                                  <  2:710372/278‑1 (MQ=255)
                                                                                                                                                           cTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTa                                                                                                                                >  2:1088752/1‑288 (MQ=255)
                                                                                                                                                           cTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCAAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTACACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCACCGGCGGATTCCTGATTGTCAGAGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGACTTCGGCATCCATTTAc                                                                                                                               >  2:1274746/1‑289 (MQ=255)
                                                                                                                                                              tgtgCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACg                                                                                                                              >  1:226714/1‑287 (MQ=255)
                                                                                                                                                                tgCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGc                                                                                                                                                                                                                                   >  1:75105/1‑184 (MQ=255)
                                                                                                                                                                tgCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACCGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTCCGACt                                                                                                                           >  1:710372/1‑288 (MQ=255)
                                                                                                                                                                tgCGACTGAAAAATGCGCTGGTCAAGCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGc                                                                                                                                                                                                                                   <  2:75105/184‑1 (MQ=255)
                                                                                                                                                                 gCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATAGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGAGACAAAGGCAGCGAGTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTa                                                                                                                          >  1:521318/1‑288 (MQ=255)
                                                                                                                                                                 gCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTAAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCCCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCGTATTGTCAGCGACGAAGGCATCGACTTTGTCCATCAGCCCAGGCCTTCGGCATCCCTTTACgctta                                                                                                                          >  2:145489/1‑284 (MQ=255)
                                                                                                                                                                   gACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTAccc                                                                                                                       <  2:705484/289‑1 (MQ=255)
                                                                                                                                                                    acggAAAAATACGCGGGTCAAACTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAAGGTGTGATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATAACGAATGAAACGGGGCGAGCGGCACAATAACTAAACAGGCCGGCCCCCGGCGGATTCCGGATTGTAAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACGTTACGACTAccc                                                                                                                       <  2:1142814/285‑1 (MQ=255)
                                                                                                                                                                       gAAAAAGTCGCGGTTCAACCTCGGCAAAAGTAAAGATTGGGACGCGCTGGTAAAACGCGCCAACGCGGGGGAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACccgc                                                                                                                     <  2:441404/287‑1 (MQ=255)
                                                                                                                                                                        aaaaaTGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCAAACGCCGGGAAGATCGATGGCGTGAATGTGTTATTACGCACGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGGTTATCACGCATGAAACGGCGAGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGGAAGCGACGAAGGCAGCGATTTTGTTGAGCAGCCCTGGCCTTCGGCATCAATTTACGACtcacccccg                                                                                                                   >  2:1276221/1‑280 (MQ=255)
                                                                                                                                                                          aaaTGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTCCGGCATCACTTTACGACTACCCGCCGCac                                                                                                                >  2:1014720/1‑288 (MQ=255)
                                                                                                                                                                           aaTGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAg                                                                                                               <  1:952781/289‑1 (MQ=255)
                                                                                                                                                                            aTGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGa                                                                                                              <  1:924678/289‑1 (MQ=255)
                                                                                                                                                                             ggcgcCGGTAAATCGCGGGAGCATGAAAGACGGGGACGGGATGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCTGGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGaa                                                                                                             <  2:319030/288‑1 (MQ=255)
                                                                                                                                                                                          ctcGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCtt                                                                                                <  1:1088752/289‑1 (MQ=255)
                                                                                                                                                                                              gCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGCTCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCa                                                                                            >  2:437545/1‑289 (MQ=255)
                                                                                                                                                                                                           cTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGGGTGCGGAATCGCGGGATAACCGGGTGGCAACCTCCACCGGGCCGTTTATCACGCAGGAAACGGCGCGGGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGcac                                                                                 <  2:364449/287‑1 (MQ=255)
                                                                                                                                                                                                            tGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACaaa                                                                              >  1:158305/1‑289 (MQ=255)
                                                                                                                                                                                                             gggACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGCTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAAt                                                                             >  1:1103427/1‑289 (MQ=255)
                                                                                                                                                                                                              ggACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGa                                                                                                      <  2:1494813/263‑1 (MQ=255)
                                                                                                                                                                                                              ggACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGa                                                                                                      >  1:1494813/1‑263 (MQ=255)
                                                                                                                                                                                                                 cgcgCTGCTAAAACGGGCCAACGCCTGGAACCTCGATGGCGTCAAGTTGTTCTTACGCCCGGTGAGTGCTGAATCTCGGGAAAACCTGGTGGCAACCTCCACCGCGCCGTTGATCACGCATGAAGGGGCGCGAGCGGCACAATCAGTAAACAGTCCGCCCCCCGGCGGATTCCTCATTGTCAGCGACGAAGGAAGCGATTTTGTTGATCAGCCCTGGGCTTCGGCATCACTTTACGACTACCCGGCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCGCAAATGCt                                                                          <  2:1108361/288‑1 (MQ=255)
                                                                                                                                                                                                                    gcTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTAccc                                                                                                                       <  1:1017640/240‑1 (MQ=255)
                                                                                                                                                                                                                    gcTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATTCTGAt                                                                       >  1:1233081/1‑288 (MQ=255)
                                                                                                                                                                                                                          aaacggcgcCAAGGCGGGGAAGCTGGATGGCGTAAATTTGTTATTACGCCCGGTGAGGGCGGAATCGCGGGATAACCGGGTGGCAACCTCCACCGAGCCATTTATCCCGCATGAAACGGGGCGGGCGGCACAAACACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGGCGAAGGCAGCGATTTTGTTGGTCAGCCCTGGCCTTCGGCAGCACGTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGGATACg                                                                <  2:102343/284‑1 (MQ=255)
                                                                                                                                                                                                                          aaacggcgcCAAGGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGGGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACg                                                                <  2:635788/284‑1 (MQ=255)
                                                                                                                                                                                                                          aaaaCGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACg                                                                <  2:226714/289‑1 (MQ=255)
                                                                                                                                                                                                                              cgcgCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGCAACTGGCACAAATGCTGATGCATACGCCGt                                                            >  1:1128674/1‑289 (MQ=255)
                                                                                                                                                                                                                                cgcCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGttt                                                          >  1:1415625/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ccAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGCCGCGAGCGGCACACTCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTATGTTGATCAGCACTGGCCTTCGGCATAACTTTACGACTACCAGCCGCAAGAACAGTGGAACGCTTCCCAGAAACTGGCACAAATGCTGACGACTACCCCGttcac                                                        >  2:200710/1‑286 (MQ=255)
                                                                                                                                                                                                                                      cGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGcc                                                    <  1:1244589/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gtTATTACGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTc                            >  1:534183/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                  ttattaCGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTCGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTg                        >  1:650700/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                      taCGCCCGGTGAGTGCGGAATCGCGGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACg                     >  2:789008/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          cccGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACg                                                                >  2:907452/1‑241 (MQ=255)
                                                                                                                                                                                                                                                                          cccGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGACTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAAt                >  1:1518762/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccggggatggCGGAATCGCGGGATAACCTGGTGGCAACCCCCACCGCGCCGTTTATCACTCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATg               <  1:172434/280‑1 (MQ=255)
                                                                                                                                                                                                                                                                               tGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTAc           >  1:485229/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                gAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTAACGTCACAAAAATCTTCACTGACGCCAATGGTAc           >  1:476766/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        aaTCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGa                                                                                                      >  2:990917/1‑189 (MQ=255)
                                                                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                                                          
AAGCAGTTAATCGCCAGCTGCACCCTAAACCGGAAGATGAATCTCGCGTCAGTGCCTCATTACGTTCAGCAATTCAAAAATCCGGCATGGTATTGCTTGATGATTTTGGCGACATTGTACTGAAGACAGCGG‑ATTTATGTTCTGCCAAAGATGACTGTGTGCGACTGAAAAATGCGCTGGTCAATCTCGGCAACAGTAAAGACTGGGACGCGCTGGTAAAACGCGCCAACGCCGGGAAGCTCGATGGCGTGAATGTGTTATTACGCCCGGTGAGTGCGGAATCGCTGGATAACCTGGTGGCAACCTCCACCGCGCCGTTTATCACGCATGAAACGGCGCGAGCGGCACAATCACTAAACAGTCCGGCCCCCGGCGGATTCCTGATTGTCAGCGACGAAGGCAGCGATTTTGTTGATCAGCCCTGGCCTTCGGCATCACTTTACGACTACCCGCCGCAAGAACAGTGGAACGCTTTCCAGAAACTGGCACAAATGCTGATGCATACGCCGTTTAACGCCGAGGGTATCGTCACAAAAATCTTCACTGACGCCAATGGTACGCAGCATAT  >  NC_000913/3527823‑3528390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A