Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,865,362 |
T→C |
V144A (GTC→GCC) |
yeaG → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,865,362 | 0 | T | C | 99.5%
| 638.7
/ ‑5.0
| 206 | V144A (GTC→GCC) | yeaG | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (100/105); total (101/105) |
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.21e-01 |
Only 100 of 212 total aligned reads displayed.
GGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG > NC_000913/1865272‑1865448
|
ggggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCa < 2:6188345/93‑1 (MQ=255)
ggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAAc > 1:341184/1‑93 (MQ=255)
ggTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAAc < 2:5698329/93‑1 (MQ=255)
gTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACg > 2:6294568/1‑93 (MQ=255)
tAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGa > 2:7420043/1‑93 (MQ=255)
aaaTCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGat < 1:5456789/93‑1 (MQ=255)
aaTCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatc > 2:7164949/1‑93 (MQ=255)
aaTCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatc < 1:7874412/93‑1 (MQ=255)
atcatcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatca < 1:4711086/93‑1 (MQ=255)
atcatcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatca < 1:7628716/93‑1 (MQ=255)
tcatcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatcat > 2:7028426/1‑93 (MQ=255)
catcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatcatc > 2:4926760/1‑93 (MQ=255)
catcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGatcatc < 1:4913143/93‑1 (MQ=255)
atcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATcc < 1:6480431/93‑1 (MQ=255)
atcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATcc < 1:3926708/93‑1 (MQ=255)
tcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCg < 2:2332300/93‑1 (MQ=255)
tcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCg < 1:93198/93‑1 (MQ=255)
tcGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCg > 1:5641834/1‑93 (MQ=255)
cGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGt < 1:143873/93‑1 (MQ=255)
gCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGtt < 2:5946442/93‑1 (MQ=255)
gCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGtt > 1:4875877/1‑93 (MQ=255)
ttGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCt < 2:4105344/93‑1 (MQ=255)
ttGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCt > 1:5531490/1‑93 (MQ=255)
ttGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCt > 2:7854342/1‑93 (MQ=255)
tGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGGTCTg > 1:3034332/1‑93 (MQ=255)
gCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGt < 2:5067467/93‑1 (MQ=255)
gAGCGACTGAAATCATTAATGCAGCTCGTACTGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCtt > 1:871970/1‑93 (MQ=255)
gAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCtt > 2:3611798/1‑93 (MQ=255)
gAGCGACTCAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCtt > 1:7151196/1‑93 (MQ=255)
aGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCttt > 1:2859837/1‑93 (MQ=255)
cGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTc < 1:570148/93‑1 (MQ=255)
gACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCa > 1:1232889/1‑93 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGCTTTATGCATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCAGTTCTGTCTTTTCat > 2:1044443/1‑92 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCaa < 1:4566315/93‑1 (MQ=255)
aCTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCaa > 2:21366/1‑93 (MQ=255)
tGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATc > 1:3464997/1‑93 (MQ=255)
tGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATc > 1:3667049/1‑93 (MQ=255)
aTCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCa < 1:4127545/93‑1 (MQ=255)
tCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAg < 2:6607946/93‑1 (MQ=255)
tCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAg < 2:3384779/93‑1 (MQ=255)
tCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAg < 2:3643215/93‑1 (MQ=255)
cATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAgg < 2:4280362/93‑1 (MQ=255)
cATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAgg < 2:6694366/93‑1 (MQ=255)
aTTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGa < 1:3966307/93‑1 (MQ=255)
ttAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGaa < 2:1474070/93‑1 (MQ=255)
ttAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGaa > 2:4808835/1‑93 (MQ=255)
tAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAg > 1:7539643/1‑93 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:1611616/93‑1 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:2271151/93‑1 (MQ=255)
aaTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGa < 1:2031534/93‑1 (MQ=255)
aTGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAt < 1:4972190/93‑1 (MQ=255)
tGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATg > 1:5586293/1‑93 (MQ=255)
gCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATgc > 1:742117/1‑93 (MQ=255)
gCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCa < 2:5297734/93‑1 (MQ=255)
cTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAg < 2:6975822/93‑1 (MQ=255)
cTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAg > 2:2390747/1‑93 (MQ=255)
tCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGa > 2:2359608/1‑93 (MQ=255)
gTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGAtt > 2:2156661/1‑93 (MQ=255)
tACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTc > 2:284795/1‑93 (MQ=255)
tACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTc < 1:4426149/93‑1 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg > 1:5154435/1‑93 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg < 1:1964137/93‑1 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg < 1:6100411/93‑1 (MQ=255)
ccGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTg > 2:4496657/1‑93 (MQ=255)
gATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGa > 2:1414430/1‑93 (MQ=255)
gATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGa < 1:1734921/93‑1 (MQ=255)
tttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaa > 2:2238524/1‑93 (MQ=255)
tttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaa > 2:7725019/1‑93 (MQ=255)
tttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaa > 1:2815411/1‑93 (MQ=255)
ttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaa > 1:5201408/1‑93 (MQ=255)
ttATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGaaaa < 1:6298208/93‑1 (MQ=255)
tGTATTGAGCGCGAACTGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga > 1:5741621/1‑93 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga > 2:1296224/1‑93 (MQ=255)
tGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAaga > 1:3239993/1‑93 (MQ=255)
gTATTGCGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAagag > 2:7786684/1‑93 (MQ=255)
gTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAagag > 2:622666/1‑93 (MQ=255)
gTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAagag < 2:5112945/93‑1 (MQ=255)
aTTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 2:3157260/93‑1 (MQ=255)
aTTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 1:5863892/93‑1 (MQ=255)
aTTGAGCGCGAACGGTGAGCGTAGCCCAGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTa < 2:3868113/93‑1 (MQ=255)
ttGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAt < 1:2163650/93‑1 (MQ=255)
tGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATg < 2:7516147/93‑1 (MQ=255)
aGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGc < 1:2620427/93‑1 (MQ=255)
aGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGc < 2:2983955/93‑1 (MQ=255)
gcgcGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCa > 1:2335628/1‑93 (MQ=255)
gcgaGAACGGTGAGAGTAACAAGGCCAACGATCATCAGTTATAACTTTACAATCCGCAGGAAGATGCGCAAATTCTGGAAAAAGAGTATGGCa < 1:6997814/93‑1 (MQ=255)
cgcgAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCAt < 1:6585192/93‑1 (MQ=255)
gAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTcc > 1:131620/1‑93 (MQ=255)
gAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTcc < 1:5784255/93‑1 (MQ=255)
gAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTcc < 2:2727333/93‑1 (MQ=255)
aCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTc > 2:6374515/1‑93 (MQ=255)
aCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTc < 1:7593805/93‑1 (MQ=255)
aCGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTc < 2:161134/93‑1 (MQ=255)
gTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGcc < 1:5547755/93‑1 (MQ=255)
tGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCACATTCTGGAAAAAGAGTATGGCATTCCTCGCCg > 1:3556155/1‑93 (MQ=255)
aGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGtt > 2:6350137/1‑93 (MQ=255)
aGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAtctc < 2:6515697/93‑1 (MQ=255)
gctcGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCg < 2:1007157/90‑1 (MQ=255)
gCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCg > 2:5132484/1‑93 (MQ=255)
gCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCg > 1:6181331/1‑93 (MQ=255)
|
GGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG > NC_000913/1865272‑1865448
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT > NC_000913/1865270‑1865455
|
TGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCC < SRR4302543.3759654/94‑1 (MQ=60)
GGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAAC > SRR4302543.344322/1‑94 (MQ=60)
AAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATC < SRR4302543.5506259/94‑1 (MQ=60)
AATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCA < SRR4302543.7948538/94‑1 (MQ=60)
ATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCAT > SRR4302543.3011054/1‑94 (MQ=60)
ATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCAT < SRR4302543.7701111/94‑1 (MQ=60)
ATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCAT < SRR4302543.4754139/94‑1 (MQ=60)
CATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCC < SRR4302543.4957918/94‑1 (MQ=60)
ATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCG < SRR4302543.3961366/94‑1 (MQ=60)
ATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCG < SRR4302543.6541490/94‑1 (MQ=60)
ATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCG < SRR4302543.626100/94‑1 (MQ=60)
ATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCG > SRR4302543.5693267/1‑94 (MQ=60)
TCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGT < SRR4302543.94066/94‑1 (MQ=60)
CGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTT < SRR4302543.145125/94‑1 (MQ=60)
CGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTT > SRR4302543.4920316/1‑94 (MQ=60)
CGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTT > SRR4302543.5838785/1‑94 (MQ=60)
CTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCT > SRR4302543.5581750/1‑94 (MQ=60)
CTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCT > SRR4302543.5581749/1‑94 (MQ=60)
TTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTG > SRR4302543.1445894/1‑94 (MQ=60)
TTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTG < SRR4302543.5455154/94‑1 (MQ=60)
TTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGGTCTG > SRR4302543.3061722/1‑94 (MQ=60)
TGAGCGACTGAAATCATTAATGCAGCTCGTACTGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTT > SRR4302543.879746/1‑94 (MQ=60)
TGAGCGACTCAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTT > SRR4302543.7220702/1‑94 (MQ=60)
GAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTT > SRR4302543.2885918/1‑94 (MQ=60)
GCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTC > SRR4302543.3226948/1‑94 (MQ=60)
CGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCA < SRR4302543.575367/94‑1 (MQ=60)
CGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCA > SRR4302543.1243989/1‑94 (MQ=60)
CGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCA > SRR4302543.4146817/1‑94 (MQ=60)
ACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAAT < SRR4302543.4607856/94‑1 (MQ=60)
CTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATC > SRR4302543.3496033/1‑94 (MQ=60)
CTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATC > SRR4302543.3699247/1‑94 (MQ=60)
TGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCC > SRR4302543.7617529/1‑94 (MQ=60)
TGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCC < SRR4302543.7970695/94‑1 (MQ=60)
GAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCC > SRR4302543.5941128/1‑94 (MQ=60)
ATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAG < SRR4302543.4164765/94‑1 (MQ=60)
ATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAG < SRR4302543.4806533/94‑1 (MQ=60)
TCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGG > SRR4302543.7672600/1‑94 (MQ=60)
CATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGA < SRR4302543.6461271/94‑1 (MQ=60)
ATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAA < SRR4302543.4001447/94‑1 (MQ=60)
ATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAA > SRR4302543.3659964/1‑94 (MQ=60)
ATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCAGTTATGTCTTTTCAATCCGCAGGAA > SRR4302543.1748171/1‑94 (MQ=60)
TTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAG > SRR4302543.7611509/1‑94 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT > SRR4302543.1251218/1‑94 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302543.2049788/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302543.2291905/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302543.5677363/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302543.6956192/94‑1 (MQ=60)
AATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGAT < SRR4302543.1625991/94‑1 (MQ=60)
ATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATG > SRR4302543.5637180/1‑94 (MQ=60)
ATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATG < SRR4302543.5017448/94‑1 (MQ=60)
TGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGC > SRR4302543.748738/1‑94 (MQ=60)
TGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGC < SRR4302543.468044/94‑1 (MQ=60)
CAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGC > SRR4302543.7808287/1‑94 (MQ=60)
AGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCA < SRR4302543.1750700/94‑1 (MQ=60)
AGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCA > SRR4302543.1479207/1‑94 (MQ=60)
CTCGTACCGATTTATGTATTGAGCGCGTACGGTGAGCGTAGCCCGGCCAACGATCCTGCGTTCTGTCTTTTCAATCCGCAGGAAGATGGGCAGA > SRR4302543.1750566/1‑94 (MQ=60)
CGTACCGATTTATGTATTGAGCGCGAACGGTGAGGGTAGCCCGGCCAACGATCATCCGTTCGGTCTTTTCAATCCGCAGGAAGAGGCGCAGctc > SRR4302543.4993245/1‑91 (MQ=60)
CGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATT > SRR4302543.4993246/1‑94 (MQ=60)
CGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATT > SRR4302543.6589165/1‑94 (MQ=60)
GTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTC < SRR4302543.2885181/94‑1 (MQ=60)
GTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTC > SRR4302543.4902366/1‑94 (MQ=60)
TACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCT < SRR4302543.5213900/94‑1 (MQ=60)
TACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCT < SRR4302543.6229413/94‑1 (MQ=60)
TACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCT > SRR4302543.5536948/1‑94 (MQ=60)
TACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCT < SRR4302543.4466252/94‑1 (MQ=60)
TCCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTG < SRR4302543.4937451/94‑1 (MQ=60)
ACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTG > SRR4302543.5201011/1‑94 (MQ=60)
CCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGG < SRR4302543.1981754/94‑1 (MQ=60)
CCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGG < SRR4302543.6158208/94‑1 (MQ=60)
CGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGA > SRR4302543.2079178/1‑94 (MQ=60)
CGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGA < SRR4302543.3362837/94‑1 (MQ=60)
GATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAA < SRR4302543.1750386/94‑1 (MQ=60)
ATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAA > SRR4302543.2841197/1‑94 (MQ=60)
TTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAA > SRR4302543.5248303/1‑94 (MQ=60)
TTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAA < SRR4302543.6357484/94‑1 (MQ=60)
TATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAG < SRR4302543.3526104/94‑1 (MQ=60)
TATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAG < SRR4302543.4221061/94‑1 (MQ=60)
ATGTATTGAGCGCGAACTGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGA > SRR4302543.5793969/1‑94 (MQ=60)
ATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGA > SRR4302543.3269298/1‑94 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302543.2676610/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG < SRR4302543.5075568/94‑1 (MQ=60)
TGTATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAG > SRR4302543.887043/1‑94 (MQ=60)
TATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTA > SRR4302543.4594340/1‑94 (MQ=60)
ATTGAGCGCGAACGGTGAGGGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATTCGCAGGAAGATGCGCAGATTCTCGAAAAAGAGaag > SRR4302543.3650792/1‑91 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT < SRR4302543.3487831/94‑1 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT > SRR4302543.7527589/1‑94 (MQ=60)
ATTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTAT < SRR4302543.5917268/94‑1 (MQ=60)
TTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATG < SRR4302543.2322489/94‑1 (MQ=60)
TTGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATG < SRR4302543.2183039/94‑1 (MQ=60)
TGAGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGG < SRR4302543.7120768/94‑1 (MQ=60)
AGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCA < SRR4302543.2644170/94‑1 (MQ=60)
AGCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCA > SRR4302543.2356820/1‑94 (MQ=60)
GCGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCAT < SRR4302543.202822/94‑1 (MQ=60)
CGCGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATT < SRR4302543.6647220/94‑1 (MQ=60)
CGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCC > SRR4302543.5803029/1‑94 (MQ=60)
CGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCC > SRR4302543.7448157/1‑94 (MQ=60)
CGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCC > SRR4302543.132795/1‑94 (MQ=60)
CGAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCC > SRR4302543.2228021/1‑94 (MQ=60)
GAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCT < SRR4302543.5836890/94‑1 (MQ=60)
GAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCT > SRR4302543.6475709/1‑94 (MQ=60)
GAACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCT < SRR4302543.3890657/94‑1 (MQ=60)
AACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTC > SRR4302543.3991782/1‑94 (MQ=60)
ACGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCG < SRR4302543.7665949/94‑1 (MQ=60)
CGGTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGC < SRR4302543.2554201/94‑1 (MQ=60)
GTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCG < SRR4302543.5598207/94‑1 (MQ=60)
GTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCG < SRR4302543.5773682/94‑1 (MQ=60)
GTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCG > SRR4302543.7939815/1‑94 (MQ=60)
GTGAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCACATTCTGGAAAAAGAGTATGGCATTCCTCGCCG > SRR4302543.3587671/1‑94 (MQ=60)
GAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTT > SRR4302543.3498748/1‑94 (MQ=60)
GAGCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTT < SRR4302543.5639322/94‑1 (MQ=60)
GCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAT > SRR4302543.5606962/1‑94 (MQ=60)
GCGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTAT < SRR4302543.5741496/94‑1 (MQ=60)
CGTAGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATC > SRR4302543.2355147/1‑94 (MQ=60)
AGCCCGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCG > SRR4302543.6239754/1‑94 (MQ=60)
CGGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCAC > SRR4302543.3097930/1‑94 (MQ=60)
GGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACC < SRR4302543.276093/94‑1 (MQ=60)
GGCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACC > SRR4302543.1622970/1‑94 (MQ=60)
GCCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCA > SRR4302543.4649868/1‑94 (MQ=60)
CCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT > SRR4302543.7448285/1‑94 (MQ=60)
CCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT > SRR4302543.4033264/1‑94 (MQ=60)
CCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT < SRR4302543.2361042/94‑1 (MQ=60)
CCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT > SRR4302543.3383157/1‑94 (MQ=60)
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TGGGGGTAAATCATCGCTTGCTGAGCGACTGAAATCATTAATGCAGCTCGTACCGATTTATGTATTGAGCGCGAACGGTGAGCGTAGCCCGGTCAACGATCATCCGTTCTGTCTTTTCAATCCGCAGGAAGATGCGCAGATTCTGGAAAAAGAGTATGGCATTCCTCGCCGTTATCTCGGCACCAT > NC_000913/1865270‑1865455
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
