Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,987,280 |
A→G |
R78R (CGT→CGC) |
yecH ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,987,280 | 0 | A | G | 99.5%
| 677.2
/ NA
| 214 | R78R (CGT→CGC) | yecH | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (114/99); minor base T (1/0); total (115/99) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 218 total aligned reads displayed.
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
tATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCCGCGGCAGGGTTACTGCCGCCGGTTCAAATCCGTggcggc > 2:4752885/1‑93 (MQ=255)
ttttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaa > 2:1490278/1‑93 (MQ=255)
ttttATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCaa > 1:3372219/1‑93 (MQ=255)
tATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAtt > 1:961808/1‑92 (MQ=255)
tCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCtt > 2:2465692/1‑93 (MQ=255)
caaCAAAGACCTCCCTCCCCGCGACACACAAACCTAAGGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTa < 2:3069938/91‑1 (MQ=255)
cGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTa < 2:3322766/93‑1 (MQ=255)
gACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTAc < 1:5518838/93‑1 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct < 2:2761710/93‑1 (MQ=255)
aaaGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTActct < 1:7875765/93‑1 (MQ=255)
aGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGa < 1:2774637/93‑1 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt > 2:2559889/1‑93 (MQ=255)
gAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAt < 1:3904346/93‑1 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc > 2:5280324/1‑93 (MQ=255)
aaCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATc < 1:7268297/93‑1 (MQ=255)
aCTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTgctag > 2:5862857/1‑89 (MQ=255)
ctctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCgg < 2:2558259/93‑1 (MQ=255)
tctctACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGt > 2:7203357/1‑93 (MQ=255)
ctACCCTCGACACACAAAACTAATGCTCCCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGa < 1:3582892/93‑1 (MQ=255)
tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaa > 1:4247324/1‑93 (MQ=255)
tACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaa > 1:633482/1‑93 (MQ=255)
cccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaa > 1:2563376/1‑93 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa > 1:3599928/1‑93 (MQ=255)
ccTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGaaaaa < 1:230170/93‑1 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc > 1:6155321/1‑93 (MQ=255)
cTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAc < 2:2253046/93‑1 (MQ=255)
cGACACACAAAACTAAGCCTCCCCGGCGGCAGGTTTCCTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg < 2:1654538/93‑1 (MQ=255)
cGACACAAAAAACAAAGGCTCTCCGGCGGCGGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCg < 1:1436747/93‑1 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 2:1580968/1‑93 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 2:4663275/1‑93 (MQ=255)
gACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGt > 2:7921628/1‑93 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 1:908043/93‑1 (MQ=255)
acacacAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 2:6769663/93‑1 (MQ=255)
acacacAAAACTAATGCTCGCCGACGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGGTCGGTCGAAAAACCGTc < 2:5405150/93‑1 (MQ=255)
acacacAAAACTAATGCTATCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTc < 2:824178/93‑1 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt < 2:7711129/93‑1 (MQ=255)
cacacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCt < 1:3714790/93‑1 (MQ=255)
acacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCtt < 1:125523/93‑1 (MQ=255)
cacaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCttt > 2:4936644/1‑93 (MQ=255)
acaAAACTAGTGCTCTCGGGCGGCAGTTTTACGGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc < 2:2880077/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCATGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc < 2:7368466/93‑1 (MQ=255)
acaAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTc > 1:6454261/1‑93 (MQ=255)
caAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCg < 2:6602440/93‑1 (MQ=255)
caAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAACGTCTTTCg > 2:4066354/1‑93 (MQ=255)
aaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa < 1:3444177/93‑1 (MQ=255)
aaaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa < 1:2237298/93‑1 (MQ=255)
aaaCTAATGCTCTCCGGAGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGaa > 1:3203367/1‑93 (MQ=255)
aaCTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAg > 2:7839586/1‑93 (MQ=255)
cTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGt > 1:2844793/1‑93 (MQ=255)
tAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta > 2:4221459/1‑93 (MQ=255)
tAATGCTCGCCGGCGGCAGGTTTACTGCTGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGta < 1:1870594/93‑1 (MQ=255)
aaTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat > 2:208370/1‑93 (MQ=255)
aaTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat < 1:7150135/93‑1 (MQ=255)
aaTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGtat > 2:2310765/1‑93 (MQ=255)
aTGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTCCGAAGGtata < 2:5092381/93‑1 (MQ=255)
tGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaa > 2:2045809/1‑93 (MQ=255)
gCTCTCCGGCGGCAGGTTTACTGCCGCCGGTTCAAATCAGTGGCGGCAAATCTTACTCTGCTCGGTCGAAAAACCGTCTTTCGGAGGGATaat > 2:3166295/1‑92 (MQ=255)
gCTCTCCGGCGGCAGGTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATaaa < 1:4230214/93‑1 (MQ=255)
ctctCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt < 1:233883/93‑1 (MQ=255)
cccgccGGCGCAAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAt < 2:3233991/89‑1 (MQ=255)
ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt > 2:5450418/1‑93 (MQ=255)
ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt > 2:1927541/1‑93 (MQ=255)
ctcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAttt < 2:1105978/93‑1 (MQ=255)
tcCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTg > 2:5740119/1‑93 (MQ=255)
cggcggCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGcc < 2:6096220/93‑1 (MQ=255)
gcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtt > 1:6949652/1‑93 (MQ=255)
gcggcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCtt < 2:6898000/93‑1 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 1:3981909/1‑93 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 1:5637984/1‑93 (MQ=255)
gcAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtg > 1:4121299/1‑93 (MQ=255)
cAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgc < 2:2555696/93‑1 (MQ=255)
aGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgct > 1:5235393/1‑93 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATACATTTGCCTTTtgctc > 1:4127735/1‑92 (MQ=255)
ggTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctc > 1:4069731/1‑92 (MQ=255)
gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc < 2:2629360/93‑1 (MQ=255)
gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc < 2:7519013/93‑1 (MQ=255)
gTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTtgctgc < 2:7557802/93‑1 (MQ=255)
cTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaa < 1:2403896/93‑1 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAACACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa > 2:7392004/1‑93 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa < 1:4914669/93‑1 (MQ=255)
tGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGaaa > 1:4420002/1‑93 (MQ=255)
tGCCGCCGTGTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAGGGTATAAATTTGCCTTTTGCTGCCAGaaa < 2:7880403/93‑1 (MQ=255)
gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAc > 2:1774569/1‑93 (MQ=255)
gccgccGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAc < 2:2231612/93‑1 (MQ=255)
cgccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGc > 1:187448/1‑93 (MQ=255)
gccgTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCCGAAACGCt > 1:2969182/1‑93 (MQ=255)
gTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGTCTTTTGCTGCCAGAAACGCTAcc > 2:4426602/1‑93 (MQ=255)
gTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAcc < 1:7429252/93‑1 (MQ=255)
tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa > 1:5856182/1‑93 (MQ=255)
tttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAACGTCTTTCGAAGGGATAAATTTGCCTTTTGCTGCCAGAAACGCTACCa > 2:6315060/1‑93 (MQ=255)
ttCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAg < 2:7152064/93‑1 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct < 2:3689906/93‑1 (MQ=255)
cAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGct < 2:3689908/93‑1 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc > 2:3632906/1‑93 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc > 2:6554296/1‑93 (MQ=255)
aaaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctc > 1:1751454/1‑93 (MQ=255)
aaTCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGctct > 1:5295060/1‑93 (MQ=255)
tCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTcc < 2:213408/93‑1 (MQ=255)
tCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTcc > 1:1959335/1‑93 (MQ=255)
tCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTcc < 2:4052480/93‑1 (MQ=255)
|
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > NC_000913/1987190‑1987369
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTG > NC_000913/1987188‑1987371
|
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC < SRR4302543.1111037/94‑1 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC > SRR4302543.5744684/1‑94 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGC > SRR4302543.5744683/1‑94 (MQ=60)
TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGGTTACTGCCGCCGTTTCAAATCAGTGGC > SRR4302543.2245153/1‑94 (MQ=60)
TGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGG > SRR4302543.2907907/1‑94 (MQ=60)
GTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGC > SRR4302543.3617486/1‑94 (MQ=60)
ATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAA > SRR4302543.3402503/1‑94 (MQ=60)
TTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAAT < SRR4302543.2804518/94‑1 (MQ=60)
TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATT > SRR4302543.970248/1‑94 (MQ=60)
TTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATC > SRR4302543.970247/1‑94 (MQ=60)
GACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACT < SRR4302543.5568960/94‑1 (MQ=60)
acaacgcccctctcCCCTCGACACACAAACCTAATGCTCTCCGGCGGCAGGTGTACTGCCGCCGTTACAAATCAGAGGCGGCAAATCTTACTCT < SRR4302543.5875640/80‑1 (MQ=60)
AAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCT < SRR4302543.5875639/94‑1 (MQ=60)
AAAGAGCGCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302543.4782460/94‑1 (MQ=60)
AAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302543.7949900/94‑1 (MQ=60)
AAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTG < SRR4302543.3691334/94‑1 (MQ=60)
AAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGAGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGA > SRR4302543.3516559/1‑94 (MQ=60)
AGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGAT < SRR4302543.2799900/94‑1 (MQ=60)
GAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATC < SRR4302543.3938817/94‑1 (MQ=60)
AACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCG < SRR4302543.7338515/94‑1 (MQ=60)
CTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCG > SRR4302543.5203995/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA > SRR4302543.639272/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA > SRR4302543.4285866/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA > SRR4302543.4285865/1‑94 (MQ=60)
CTACCCTCGACACACAAAACTAATGCTCCCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAA < SRR4302543.3614541/94‑1 (MQ=60)
ACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAA > SRR4302543.2586795/1‑94 (MQ=60)
CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA > SRR4302543.3631698/1‑94 (MQ=60)
CCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAA < SRR4302543.2553460/94‑1 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302543.2134539/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302543.7257415/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC < SRR4302543.232159/94‑1 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAAC > SRR4302543.6213591/1‑94 (MQ=60)
CCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCAGTCGAAAAAC < SRR4302543.3488241/94‑1 (MQ=60)
CTCGACACGTAAAACTAATGCTCTCCGGCGGCAGGGTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302543.2288665/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC < SRR4302543.6929743/94‑1 (MQ=60)
CTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACC > SRR4302543.3460821/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCACATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302543.7414109/1‑94 (MQ=60)
CGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT > SRR4302543.2649161/1‑94 (MQ=60)
CGACACAAAAAACAAAGGCTCTCCGGCGGCGGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGT < SRR4302543.1449735/94‑1 (MQ=60)
GACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC > SRR4302543.2130947/1‑94 (MQ=60)
GACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTC < SRR4302543.997667/94‑1 (MQ=60)
ACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCT < SRR4302543.916035/94‑1 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT > SRR4302543.744468/1‑94 (MQ=60)
CACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTT < SRR4302543.3747459/94‑1 (MQ=60)
ACACAAAACTAATGCTCTCTGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT > SRR4302543.4310539/1‑94 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302543.126659/94‑1 (MQ=60)
ACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTT < SRR4302543.3289429/94‑1 (MQ=60)
CACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTC > SRR4302543.6515078/1‑94 (MQ=60)
acaaaacgaatgagtcgccgcggcagttttgccgcccctggtgCAAATCAGTGGCGGCACATCTTACTCTGATCGGTCGAAAACCCGTCTTTCG < SRR4302543.414002/51‑1 (MQ=47)
ACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCG < SRR4302543.414003/94‑1 (MQ=60)
CAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGA > SRR4302543.3771572/1‑94 (MQ=60)
CAAAACTAATGCTCTCCGGCGGCAGGGTTACTGCCGCCGTTTCAAATCAGTGTCGGCAAATCTTACTCTGTACGGTCGAATAACCGTCTTTCGA > SRR4302543.7085263/1‑94 (MQ=60)
AAAACTAATGCTCTCCGGAGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAA > SRR4302543.3232265/1‑94 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG > SRR4302543.2373411/1‑94 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG < SRR4302543.3475018/94‑1 (MQ=60)
AAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAG < SRR4302543.2257552/94‑1 (MQ=60)
AACAAGTGCTCTCGGGCGGAGGGTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGG < SRR4302543.6642458/94‑1 (MQ=60)
ACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGT > SRR4302543.2870776/1‑94 (MQ=60)
CTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTA > SRR4302543.5618151/1‑94 (MQ=60)
TAATGCTTACAGGCGGCAGTTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302543.1887400/94‑1 (MQ=60)
TAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT > SRR4302543.4217747/1‑94 (MQ=60)
TAATGCTCGCCGGCGGCAGGTTTACTGCTGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTAT < SRR4302543.1887399/94‑1 (MQ=60)
AATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATA < SRR4302543.7219632/94‑1 (MQ=60)
agccctgCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAA < SRR4302543.6159325/87‑1 (MQ=60)
TGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAA < SRR4302543.5996541/94‑1 (MQ=60)
GCTCTCCGGCGGCAGGTTTACTCCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAAT < SRR4302543.4268588/94‑1 (MQ=60)
CTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT > SRR4302543.3165241/1‑94 (MQ=60)
CTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATT < SRR4302543.235902/94‑1 (MQ=60)
TCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTT > SRR4302543.2857870/1‑94 (MQ=60)
CTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTG > SRR4302543.4149130/1‑94 (MQ=60)
CTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTG > SRR4302543.1435576/1‑94 (MQ=60)
TCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGC < SRR4302543.6370718/94‑1 (MQ=60)
CGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCT < SRR4302543.5539268/94‑1 (MQ=60)
GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT > SRR4302543.7015033/1‑94 (MQ=60)
GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT > SRR4302543.7743882/1‑94 (MQ=60)
GGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTT > SRR4302543.6465576/1‑94 (MQ=60)
CGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTT < SRR4302543.3965819/94‑1 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG > SRR4302543.1896008/1‑94 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG > SRR4302543.1666860/1‑94 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG > SRR4302543.4017227/1‑94 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG > SRR4302543.5689378/1‑94 (MQ=60)
GGCAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTG > SRR4302543.4158446/1‑94 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT > SRR4302543.5282562/1‑94 (MQ=60)
CAGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCT > SRR4302543.4549537/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATACATTTGCCTTTTGCTC > SRR4302543.4164960/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCTTTTTGCTG > SRR4302543.4164959/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG > SRR4302543.607605/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTG > SRR4302543.818674/1‑94 (MQ=60)
AGGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTC > SRR4302543.4106183/1‑94 (MQ=60)
GGTTTACTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGC > SRR4302543.7955911/1‑94 (MQ=60)
CTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA < SRR4302543.2425640/94‑1 (MQ=60)
CTGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAA > SRR4302543.4460063/1‑94 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC < SRR4302543.4082088/94‑1 (MQ=60)
TGCCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAAC < SRR4302543.4959454/94‑1 (MQ=60)
CCGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGC > SRR4302543.189041/1‑94 (MQ=60)
cacgtgTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCTTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCT < SRR4302543.7121769/88‑1 (MQ=60)
CGCCGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCCGAAACGCT > SRR4302543.2996147/1‑94 (MQ=60)
CGTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACC < SRR4302543.1828527/94‑1 (MQ=60)
GTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCA < SRR4302543.7500489/94‑1 (MQ=60)
GTTTCAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCA > SRR4302543.5909488/1‑94 (MQ=60)
CAAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTC > SRR4302543.1767102/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302543.5342868/1‑94 (MQ=60)
AAATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCT > SRR4302543.5342869/1‑94 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTAGCAGCTCTCC > SRR4302543.235058/1‑94 (MQ=60)
ATCAGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCC > SRR4302543.1976911/1‑94 (MQ=60)
AGTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGC > SRR4302543.7290458/1‑94 (MQ=60)
GTGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCT > SRR4302543.60777/1‑94 (MQ=60)
TGGCGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTG < SRR4302543.6494991/94‑1 (MQ=60)
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TCTGTATTTTATCGACAAAGAACTCTCTACCCTCGACACACAAAACTAATGCTCTCCGGCGGCAGGTTTACTGCCGCCGTTTCAAATCAGTGACGGCAAATCTTACTCTGATCGGTCGAAAAACCGTCTTTCGAAGGTATAAATTTGCCTTTTGCTGCCAGAAACGCTACCAGCTCTCCCGCTG > NC_000913/1987188‑1987371
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
