Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,995,916 |
T→C |
Y196C (TAC→TGC) |
yecS ← |
putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,995,916 | 0 | T | C | 100.0%
| 701.0
/ NA
| 218 | Y196C (TAC→TGC) | yecS | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/84); total (134/84) |
Only 100 of 223 total aligned reads displayed.
AATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGTAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTG > NC_000913/1995826‑1996004
|
aaTGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCcagcag > 1:3512515/1‑93 (MQ=255)
aTGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACCGTCGCCATGATCCAGCAGa > 2:1897426/1‑93 (MQ=255)
aTGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGa > 1:6324225/1‑93 (MQ=255)
tGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGAt < 2:5772093/93‑1 (MQ=255)
cACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAg < 1:2846326/93‑1 (MQ=255)
cTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCg > 1:7868769/1‑93 (MQ=255)
cTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCg > 2:7852326/1‑93 (MQ=255)
tCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAGAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGa < 2:7723606/93‑1 (MQ=255)
ttttGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAgc > 2:6937547/1‑93 (MQ=255)
ttttGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAgc > 2:456097/1‑93 (MQ=255)
ttttGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAgc < 1:3749596/93‑1 (MQ=255)
ggTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAgccgcc > 2:7884399/1‑93 (MQ=255)
tctctctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGa < 2:4224366/93‑1 (MQ=255)
tctctctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGa < 2:1656812/93‑1 (MQ=255)
tctctctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGACGCCATGATCCAGCAGATGAGCGAAGCCGCCAGa > 1:5080768/1‑93 (MQ=255)
tctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACa < 1:5093832/93‑1 (MQ=255)
tctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACa > 2:7646799/1‑93 (MQ=255)
ctcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACAt < 2:5509473/93‑1 (MQ=255)
tcCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATg > 1:2182327/1‑93 (MQ=255)
ccTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATgg > 1:4697502/1‑93 (MQ=255)
cTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGt < 2:3567450/93‑1 (MQ=255)
tGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTg > 1:6191956/1‑93 (MQ=255)
tGGCGATTAAGTTGATTCTCAAAATGGGTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTg > 1:3485996/1‑93 (MQ=255)
ggCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGa > 2:7480979/1‑93 (MQ=255)
gCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGaa < 2:524361/93‑1 (MQ=255)
gATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAaca > 2:6649477/1‑93 (MQ=255)
gATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAaca > 2:5962268/1‑93 (MQ=255)
gATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAaca > 1:4922795/1‑93 (MQ=255)
aTTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAacac > 2:4427058/1‑93 (MQ=255)
aaGTTGATTCTCAAAATGGTTCTGCAAAGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTc > 2:5100359/1‑93 (MQ=255)
gTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCa > 2:3055708/1‑93 (MQ=255)
gTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCa > 1:7533706/1‑93 (MQ=255)
ttGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAg > 1:4853163/1‑93 (MQ=255)
ttGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAg > 1:7539118/1‑93 (MQ=255)
ttGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAg < 1:4480457/93‑1 (MQ=255)
ttaTTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCAGGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGATCACCTCCAGc < 2:1434443/91‑1 (MQ=255)
tGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGc < 1:1889097/93‑1 (MQ=255)
tGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGc < 2:3800666/93‑1 (MQ=255)
gATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCg < 1:71521/93‑1 (MQ=255)
aTTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGt < 2:2637386/93‑1 (MQ=255)
aTTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGt > 1:2321196/1‑93 (MQ=255)
aTTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGt > 1:6833823/1‑93 (MQ=255)
ttCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACCCCTCCAGCGTa < 1:7783874/93‑1 (MQ=255)
tctcAAAATGTTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAc < 2:2121649/93‑1 (MQ=255)
tctcAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAc < 1:1558718/93‑1 (MQ=255)
tctcAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAc < 1:6397606/93‑1 (MQ=255)
tcAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAcgc < 1:1725473/93‑1 (MQ=255)
tcAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAcgc > 2:4236524/1‑93 (MQ=255)
tcAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTAcgc > 2:3637608/1‑93 (MQ=255)
aaaaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGa < 1:7654804/93‑1 (MQ=255)
aaaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAg < 1:813412/93‑1 (MQ=255)
aaaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAg > 1:3266167/1‑93 (MQ=255)
aaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAgg > 2:4902543/1‑93 (MQ=255)
aaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAgg < 1:1397000/93‑1 (MQ=255)
aaTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAgg < 1:7463937/93‑1 (MQ=255)
aTGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGt < 2:3419569/93‑1 (MQ=255)
tGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTa > 2:4827318/1‑93 (MQ=255)
ggTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTaa < 1:4355101/93‑1 (MQ=255)
gTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAAt > 2:7315835/1‑93 (MQ=255)
ttCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATc > 1:6550838/1‑93 (MQ=255)
cTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCaa > 2:1432450/1‑93 (MQ=255)
cTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCaa < 1:5367839/93‑1 (MQ=255)
cTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCaa > 2:3277805/1‑93 (MQ=255)
tGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAAc > 1:1227286/1‑93 (MQ=255)
tGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAAc < 1:2897646/93‑1 (MQ=255)
gCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACt > 2:713246/1‑93 (MQ=255)
aaCGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTgc > 2:2893479/1‑93 (MQ=255)
aCGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTgcg > 1:1280088/1‑93 (MQ=255)
aCGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTgcg > 1:2616616/1‑93 (MQ=255)
cGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTgcgc < 2:7524248/93‑1 (MQ=255)
gTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGcc > 1:6449679/1‑93 (MQ=255)
gTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGcc < 1:2232136/93‑1 (MQ=255)
tCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCt > 2:585979/1‑93 (MQ=255)
aTAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGAc < 1:3155185/93‑1 (MQ=255)
aTAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGAc > 2:2805019/1‑93 (MQ=255)
aTAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGAc > 2:6332238/1‑93 (MQ=255)
tAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACg > 1:7400692/1‑93 (MQ=255)
acacAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGACCACCTCCAGCGTACGCGAGGTCATCAACTCCGCCGGACgaa > 1:6148798/1‑91 (MQ=255)
cacaGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGaa < 1:4158904/93‑1 (MQ=255)
acaGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAAc < 2:6793724/93‑1 (MQ=255)
acaGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAAc < 2:645860/93‑1 (MQ=255)
caGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACa < 2:3218573/93‑1 (MQ=255)
caGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACa < 1:5578754/93‑1 (MQ=255)
aGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAg < 1:7815259/93‑1 (MQ=255)
aGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAg > 1:5448491/1‑93 (MQ=255)
gTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGc < 2:6248369/93‑1 (MQ=255)
gTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGc > 2:1026076/1‑93 (MQ=255)
gTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGc > 1:7083257/1‑93 (MQ=255)
gTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGc > 1:5244625/1‑93 (MQ=255)
gCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTcc < 2:1523128/93‑1 (MQ=255)
gCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTcc > 1:2784266/1‑93 (MQ=255)
gCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTcc < 2:795605/93‑1 (MQ=255)
ccATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCg > 2:1838621/1‑93 (MQ=255)
tGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCa < 2:5618124/93‑1 (MQ=255)
gATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCAc > 1:4392183/1‑93 (MQ=255)
tCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCt > 1:5393185/1‑93 (MQ=255)
ccAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTg < 1:1046621/93‑1 (MQ=255)
ccAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTg < 1:3912930/93‑1 (MQ=255)
ccAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTg < 1:1647642/93‑1 (MQ=255)
ccAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTg < 2:90498/93‑1 (MQ=255)
|
AATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGTAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTG > NC_000913/1995826‑1996004
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGTAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGGATTG > NC_000913/1995823‑1996009
|
TTCAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGC < SRR4302543.4036866/94‑1 (MQ=60)
TTCAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGC > SRR4302543.3702197/1‑94 (MQ=60)
TCAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCA < SRR4302543.1054609/94‑1 (MQ=60)
CAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAG > SRR4302543.3543894/1‑94 (MQ=60)
CAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAG > SRR4302543.2510997/1‑94 (MQ=60)
CAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAG > SRR4302543.4381252/1‑94 (MQ=60)
AATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGA > SRR4302543.6383704/1‑94 (MQ=60)
AATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGA < SRR4302543.4779004/94‑1 (MQ=60)
GCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAG > SRR4302543.5138410/1‑94 (MQ=60)
GCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAG < SRR4302543.5480098/94‑1 (MQ=60)
GCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAG < SRR4302543.1319457/94‑1 (MQ=60)
CACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGC < SRR4302543.2872316/94‑1 (MQ=60)
ACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCG > SRR4302543.7933362/1‑94 (MQ=60)
ACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCG > SRR4302543.6283445/1‑94 (MQ=60)
ACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCG > SRR4302543.7942862/1‑94 (MQ=60)
ACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCAAGCAGATGAGCG > SRR4302543.5393925/1‑94 (MQ=60)
CATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACTCAGTCGCCATGATCCAGCAGATGAGCGAAG < SRR4302543.3270504/94‑1 (MQ=60)
CATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAG > SRR4302543.4596915/1‑94 (MQ=60)
CATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAG < SRR4302543.1417462/94‑1 (MQ=60)
TTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCC < SRR4302543.3782587/94‑1 (MQ=60)
GGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCA > SRR4302543.2297241/1‑94 (MQ=60)
TTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGACGCCATGATCCAGCAGATGAGCGAAGCCGCCAGA > SRR4302543.5126847/1‑94 (MQ=60)
TCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGAT > SRR4302543.3542899/1‑94 (MQ=60)
TCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACAT < SRR4302543.5139973/94‑1 (MQ=60)
TCTCCTGGCGATTAAGTTAATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACAT > SRR4302543.833568/1‑94 (MQ=60)
CTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATG > SRR4302543.2201891/1‑94 (MQ=60)
CTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATG > SRR4302543.2201890/1‑94 (MQ=60)
CTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATG < SRR4302543.766015/94‑1 (MQ=60)
TCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGG > SRR4302543.4740406/1‑94 (MQ=60)
TCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGG < SRR4302543.1665478/94‑1 (MQ=60)
CCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGT > SRR4302543.3798360/1‑94 (MQ=60)
CTGGCGATTAAGTTGCTTCTCAAAATGGTTCTGCCACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCCGATACATGGTG > SRR4302543.6250459/1‑94 (MQ=60)
CTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTG < SRR4302543.655055/94‑1 (MQ=60)
CTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTG > SRR4302543.6250460/1‑94 (MQ=60)
CTGGCGATTAAGTTGATTCTCAAAATGGGTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTG > SRR4302543.3517210/1‑94 (MQ=60)
TGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGA < SRR4302543.4491430/94‑1 (MQ=60)
GGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAA > SRR4302543.6877802/1‑94 (MQ=60)
GCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAAC < SRR4302543.7757722/94‑1 (MQ=60)
CGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACA > SRR4302543.160748/1‑94 (MQ=60)
CGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACA > SRR4302543.4967645/1‑94 (MQ=60)
CGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACA > SRR4302543.5153361/1‑94 (MQ=60)
GATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACAC > SRR4302543.6184439/1‑94 (MQ=60)
AGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCA > SRR4302543.3635364/1‑94 (MQ=60)
AGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCA > SRR4302543.7605541/1‑94 (MQ=60)
GTTGCTTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGGCGCCAGATACATGGTGAACACCTCCAT > SRR4302543.4396128/1‑94 (MQ=60)
GTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAG > SRR4302543.4897419/1‑94 (MQ=60)
GTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAG > SRR4302543.7610981/1‑94 (MQ=60)
GTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAG > SRR4302543.3543494/1‑94 (MQ=60)
TTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGC < SRR4302543.4521142/94‑1 (MQ=60)
TGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGCTGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCG > SRR4302543.2887830/1‑94 (MQ=60)
TGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCG < SRR4302543.1268728/94‑1 (MQ=60)
TGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCG < SRR4302543.1906073/94‑1 (MQ=60)
TGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCG > SRR4302543.2887828/1‑94 (MQ=60)
TGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCG > SRR4302543.3128666/1‑94 (MQ=60)
GATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGT < SRR4302543.72173/94‑1 (MQ=60)
GATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGT > SRR4302543.6898338/1‑94 (MQ=60)
GATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGT > SRR4302543.7997583/1‑94 (MQ=60)
GATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGT > SRR4302543.2342293/1‑94 (MQ=60)
TTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACCCCTCCAGCGTAC < SRR4302543.7857258/94‑1 (MQ=60)
TCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACG < SRR4302543.6457829/94‑1 (MQ=60)
TCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACG < SRR4302543.1572646/94‑1 (MQ=60)
TCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACG > SRR4302543.5438084/1‑94 (MQ=60)
TCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCG < SRR4302543.1740854/94‑1 (MQ=60)
TCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCG > SRR4302543.7647120/1‑94 (MQ=60)
AAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAG < SRR4302543.7727378/94‑1 (MQ=60)
AAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAG > SRR4302543.3295682/1‑94 (MQ=60)
AAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAG > SRR4302543.2202245/1‑94 (MQ=60)
AAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGG < SRR4302543.820573/94‑1 (MQ=60)
AAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGG < SRR4302543.106675/94‑1 (MQ=60)
AATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGT < SRR4302543.1409600/94‑1 (MQ=60)
AATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGT > SRR4302543.756341/1‑94 (MQ=60)
AATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGT < SRR4302543.7535439/94‑1 (MQ=60)
ATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTA > SRR4302543.7262880/1‑94 (MQ=60)
TGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAA > SRR4302543.2852094/1‑94 (MQ=60)
GGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAAT > SRR4302543.7512280/1‑94 (MQ=60)
GGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAAT < SRR4302543.4394566/94‑1 (MQ=60)
GTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATC > SRR4302543.6612499/1‑94 (MQ=60)
TTCTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCA > SRR4302543.6990124/1‑94 (MQ=60)
TCTGCAACGTCGATAACACAGCCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTCATCAA > SRR4302543.5557538/1‑94 (MQ=60)
CTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAAC < SRR4302543.5416432/94‑1 (MQ=60)
CTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAAC > SRR4302543.1238314/1‑94 (MQ=60)
CTGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAAC > SRR4302543.4953241/1‑94 (MQ=60)
TGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACT < SRR4302543.7609214/94‑1 (MQ=60)
TGCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACT < SRR4302543.2923987/94‑1 (MQ=60)
GCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTG < SRR4302543.5414365/94‑1 (MQ=60)
GCAACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTG < SRR4302543.5039412/94‑1 (MQ=60)
AACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCG > SRR4302543.1291499/1‑94 (MQ=60)
AACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCG > SRR4302543.2640346/1‑94 (MQ=60)
AACGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCC > SRR4302543.2640347/1‑94 (MQ=60)
CGTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCC > SRR4302543.6510455/1‑94 (MQ=60)
GTCGATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCT < SRR4302543.2252316/94‑1 (MQ=60)
GATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGAC > SRR4302543.7461082/1‑94 (MQ=60)
GATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCAAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGAC > SRR4302543.7160948/1‑94 (MQ=60)
ATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACG < SRR4302543.3183584/94‑1 (MQ=60)
ATAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACG > SRR4302543.7471739/1‑94 (MQ=60)
TAACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGG > SRR4302543.6607669/1‑94 (MQ=60)
AACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGACCACCTCCAGCGTACGCGAGGTCATCAACTCCGCCGGACGAA > SRR4302543.6207024/1‑94 (MQ=60)
AACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGTA > SRR4302543.6207020/1‑94 (MQ=60)
AACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGA > SRR4302543.4171591/1‑94 (MQ=60)
ACACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAA > SRR4302543.2240951/1‑94 (MQ=60)
CACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAAC < SRR4302543.4196526/94‑1 (MQ=60)
CACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAAC < SRR4302543.638846/94‑1 (MQ=60)
CACAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAAC > SRR4302543.1834412/1‑94 (MQ=60)
CAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAG < SRR4302543.3311829/94‑1 (MQ=60)
CAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAG < SRR4302543.5629542/94‑1 (MQ=60)
CAGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAG > SRR4302543.5497920/1‑94 (MQ=60)
AGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGC > SRR4302543.7152048/1‑94 (MQ=60)
AGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGC > SRR4302543.5291901/1‑94 (MQ=60)
AGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGC > SRR4302543.4306231/1‑94 (MQ=60)
AGTCGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGC < SRR4302543.7888904/94‑1 (MQ=60)
CGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGCCGGAACAGCTCC < SRR4302543.7859966/94‑1 (MQ=60)
CGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCC > SRR4302543.91344/1‑94 (MQ=60)
CGCCATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCC > SRR4302543.2809661/1‑94 (MQ=60)
CATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGC > SRR4302543.1653649/1‑94 (MQ=60)
ATGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCA > SRR4302543.4900125/1‑94 (MQ=60)
TGATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCAC > SRR4302543.4432000/1‑94 (MQ=60)
ATCCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCT > SRR4302543.5442221/1‑94 (MQ=60)
CCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGG < SRR4302543.6508899/94‑1 (MQ=60)
CCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGG < SRR4302543.3947467/94‑1 (MQ=60)
CCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGG < SRR4302543.1662374/94‑1 (MQ=60)
CCAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGG < SRR4302543.1055992/94‑1 (MQ=60)
CAGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGGA > SRR4302543.4125718/1‑94 (MQ=60)
AGCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGGAT < SRR4302543.4656282/94‑1 (MQ=60)
GCAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTAACGGAACAGCTCCGGCACCTGGATT > SRR4302543.6162767/1‑94 (MQ=60)
CAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGGATTG > SRR4302543.1911212/1‑94 (MQ=60)
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TTCAATGGCACTCATTTTGGTTCTCTCTCCTGGCGATTAAGTTGATTCTCAAAATGGTTCTGCAACGTCGATAACACAGTCGCCATGATCCAGTAGATGAGCGAAGCCGCCAGATACATGGTGAACACCTCCAGCGTACGCGAGGTAATCAACTGCGCCTGACGGAACAGCTCCGGCACCTGGATTG > NC_000913/1995823‑1996009
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
