Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1696 |
279.3 |
15874187 |
97.8% |
15524954 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,306,256 |
T→C |
E127G (GAA→GGA) |
yojI ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,306,256 | 0 | T | C | 99.5%
| 637.5
/ NA
| 202 | E127G (GAA→GGA) | yojI | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (108/93); total (108/94) |
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 213 total aligned reads displayed.
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC > NC_000913/2306166‑2306345
|
aTCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTccc > 2:3588518/1‑93 (MQ=255)
tCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCg > 2:618677/1‑93 (MQ=255)
tCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCg > 1:6495715/1‑93 (MQ=255)
gATAGCCGTTACCAGCGACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg > 1:2425107/1‑93 (MQ=255)
gATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAg > 1:1621820/1‑93 (MQ=255)
aTAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGa > 2:6352319/1‑93 (MQ=255)
tAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGACCCGATAGTGAGAATGATCCCCTCCACCAGTCCCGGCAgcg > 1:6472065/1‑91 (MQ=255)
tAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGAc < 2:6859992/93‑1 (MQ=255)
aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg > 1:6616522/1‑93 (MQ=255)
aGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACg > 2:1614983/1‑93 (MQ=255)
aGCCGTTACCAGCAACATTTTGCCCGACAGAATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATGCCCTGCACCAGTCCCTGCataag > 2:1379473/1‑89 (MQ=255)
gCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGc > 2:4660215/1‑93 (MQ=255)
ttACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa < 1:925445/93‑1 (MQ=255)
ttACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa > 2:5452351/1‑93 (MQ=255)
gtACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACaa < 1:3478431/92‑1 (MQ=255)
gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa < 1:3145324/93‑1 (MQ=255)
gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa > 1:5626662/1‑93 (MQ=255)
gCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCaa > 2:330060/1‑93 (MQ=255)
cAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAt < 1:63885/93‑1 (MQ=255)
cAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAt < 2:216020/93‑1 (MQ=255)
aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg < 1:7549020/93‑1 (MQ=255)
aCATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATgg < 1:4820485/93‑1 (MQ=255)
aCATTTCGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATgg < 1:49552/93‑1 (MQ=255)
cATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCGCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGt > 1:183750/1‑93 (MQ=255)
aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg > 1:1049791/1‑93 (MQ=255)
aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg > 2:3858551/1‑93 (MQ=255)
aTTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTg > 2:7532030/1‑93 (MQ=255)
ttttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGa > 1:2076126/1‑93 (MQ=255)
ttGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGata < 1:6884837/93‑1 (MQ=255)
gCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAtt < 2:2804494/93‑1 (MQ=255)
cGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcg > 1:2594274/1‑93 (MQ=255)
cGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcg > 2:6727471/1‑93 (MQ=255)
gACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTgcgc > 2:2779441/1‑93 (MQ=255)
gCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACAt < 2:1597316/93‑1 (MQ=255)
gCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACAt < 2:2006273/93‑1 (MQ=255)
cATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATc < 2:7486437/93‑1 (MQ=255)
cATCCACAGATAAGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATc < 1:2782492/93‑1 (MQ=255)
aTCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCg > 1:4446534/1‑93 (MQ=255)
tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc > 1:4577020/1‑93 (MQ=255)
tCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc < 2:2729973/93‑1 (MQ=255)
accACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGc < 1:4168150/92‑1 (MQ=255)
ccACAGATACGCCGCTGAACCGAGAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCt < 2:4307338/93‑1 (MQ=255)
cacaGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTg < 1:3405017/93‑1 (MQ=255)
caGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCGCATCGCTGGt > 1:4355761/1‑93 (MQ=255)
aGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCGCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGtt < 1:1417678/93‑1 (MQ=255)
aGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGtt > 1:5347793/1‑93 (MQ=255)
gATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTa > 1:1377541/1‑93 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa < 2:180278/93‑1 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa < 1:2890932/93‑1 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa < 2:7347454/93‑1 (MQ=255)
aTACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTaa > 1:3263593/1‑93 (MQ=255)
tACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAc > 2:7841980/1‑93 (MQ=255)
aCGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGAGATTGCGCACATCGCTGGTTAAcc < 2:5548647/93‑1 (MQ=255)
cgccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAccc < 2:1243558/93‑1 (MQ=255)
gccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAcccc < 2:3687220/93‑1 (MQ=255)
ccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCg > 2:451410/1‑93 (MQ=255)
ccgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCg > 1:6436004/1‑93 (MQ=255)
cgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGc > 2:1506888/1‑93 (MQ=255)
cgcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGc < 1:5905604/93‑1 (MQ=255)
gcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGcc > 2:1759448/1‑93 (MQ=255)
gcTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGcc > 2:5364132/1‑93 (MQ=255)
cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa < 1:6736018/93‑1 (MQ=255)
cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa < 1:629875/93‑1 (MQ=255)
cTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa < 2:2298895/93‑1 (MQ=255)
cTGAACCGATAGTGAGAATGAGCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCa < 2:5141839/93‑1 (MQ=255)
gAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGc > 1:7426066/1‑93 (MQ=255)
aaCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCa > 1:7893945/1‑93 (MQ=255)
aaCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCa > 2:1902244/1‑93 (MQ=255)
aCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCaa > 2:3974388/1‑93 (MQ=255)
aCCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCaa < 2:7128792/93‑1 (MQ=255)
ccGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAAc > 2:283941/1‑93 (MQ=255)
cGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACg > 2:5895067/1‑93 (MQ=255)
gATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGa < 1:226811/93‑1 (MQ=255)
aTAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAg < 2:381391/93‑1 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTACCCCCGCCAGCAACGAgg < 1:7641840/93‑1 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg < 2:2381879/93‑1 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg > 1:3076573/1‑93 (MQ=255)
tAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAgg > 1:5016469/1‑93 (MQ=255)
aGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgc > 2:6928131/1‑93 (MQ=255)
gTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGgcg > 1:6005298/1‑93 (MQ=255)
gagaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCt < 1:5426852/93‑1 (MQ=255)
agaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTa > 1:3489060/1‑93 (MQ=255)
gaATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTAc > 1:5481439/1‑93 (MQ=255)
tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa < 1:5303295/93‑1 (MQ=255)
tGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGa < 2:6065625/93‑1 (MQ=255)
aTCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgt > 2:5816800/1‑93 (MQ=255)
aTCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgt > 2:1566035/1‑93 (MQ=255)
ccccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttg < 1:3848723/93‑1 (MQ=255)
cccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgt > 1:3966518/1‑93 (MQ=255)
ccTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAgttgtt < 2:4411705/93‑1 (MQ=255)
cTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTc < 2:6584841/93‑1 (MQ=255)
tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa > 1:1254215/1‑93 (MQ=255)
tGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCa < 1:5564620/93‑1 (MQ=255)
gCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa < 1:3685226/93‑1 (MQ=255)
gCACCAGACCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCaa < 2:6996867/93‑1 (MQ=255)
cACCAGTCCCGGCAGACGCACAAAAGCGATGGTGATATTCCGCACTTCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAt < 1:7299668/93‑1 (MQ=255)
cccAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg < 2:7707606/92‑1 (MQ=255)
aCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATg > 1:2340344/1‑93 (MQ=255)
cAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATgcg < 1:2976830/93‑1 (MQ=255)
aGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGGGTTGTTCAATgcgc > 1:4654969/1‑93 (MQ=255)
|
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC > NC_000913/2306166‑2306345
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA > NC_000913/2306163‑2306349
|
GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTC > SRR4302543.6001057/1‑94 (MQ=60)
CCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCC > SRR4302543.2530061/1‑94 (MQ=60)
CCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCC > SRR4302543.5515306/1‑94 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC > SRR4302543.6438610/1‑94 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC < SRR4302543.1245986/94‑1 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC < SRR4302543.5490168/94‑1 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC > SRR4302543.7341248/1‑94 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC < SRR4302543.7072201/94‑1 (MQ=60)
CATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCC < SRR4302543.6759370/94‑1 (MQ=60)
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCG > SRR4302543.1158969/1‑94 (MQ=60)
ATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCG > SRR4302543.6556907/1‑94 (MQ=60)
CCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGCGAGAATGATCCCCTGCACCAGTCCCGGC > SRR4302543.5975627/1‑94 (MQ=60)
CAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCA < SRR4302543.321053/94‑1 (MQ=60)
CAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCA < SRR4302543.1269402/94‑1 (MQ=60)
CAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCA > SRR4302543.436332/1‑94 (MQ=60)
AGATAGCCGTTACCAGCGACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAG > SRR4302543.2446998/1‑94 (MQ=60)
AGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAG > SRR4302543.1636275/1‑94 (MQ=60)
ATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGACCCGATAGTGAGAATGATCCCCTCCACCAGTCCCGGCAGcg > SRR4302543.6533039/1‑92 (MQ=60)
ATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGAC > SRR4302543.6533038/1‑94 (MQ=60)
TAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACG > SRR4302543.6678909/1‑94 (MQ=60)
TAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACG > SRR4302543.6238605/1‑94 (MQ=60)
CCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCAC < SRR4302543.2305840/94‑1 (MQ=60)
GTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAA > SRR4302543.1001579/1‑94 (MQ=60)
GTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAA > SRR4302543.3922765/1‑94 (MQ=60)
TTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAA < SRR4302543.933537/94‑1 (MQ=60)
GTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAA < SRR4302543.3509589/94‑1 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA > SRR4302543.3227756/1‑94 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA > SRR4302543.5677937/1‑94 (MQ=60)
AGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAA > SRR4302543.7429487/1‑94 (MQ=60)
GCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAAT < SRR4302543.3173614/94‑1 (MQ=60)
CAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATG > SRR4302543.5095730/1‑94 (MQ=60)
CAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATG < SRR4302543.64447/94‑1 (MQ=60)
AACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGG < SRR4302543.65501/94‑1 (MQ=60)
ACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCGCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGT > SRR4302543.185314/1‑94 (MQ=60)
ACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGT < SRR4302543.4864491/94‑1 (MQ=60)
ACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGT < SRR4302543.7620929/94‑1 (MQ=60)
ACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGG > SRR4302543.6926995/1‑94 (MQ=60)
ACATTTCGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGT < SRR4302543.49999/94‑1 (MQ=60)
CATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTG > SRR4302543.1059196/1‑94 (MQ=60)
CATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTG < SRR4302543.3068427/94‑1 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302543.5292397/1‑94 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302543.5607618/1‑94 (MQ=60)
ATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGA > SRR4302543.2094668/1‑94 (MQ=60)
TTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATAT < SRR4302543.6949602/94‑1 (MQ=60)
TGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATT < SRR4302543.5626749/94‑1 (MQ=60)
TGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATT > SRR4302543.3515712/1‑94 (MQ=60)
CCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCG < SRR4302543.6279005/94‑1 (MQ=60)
CCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCG > SRR4302543.2617844/1‑94 (MQ=60)
CGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGC > SRR4302543.3611133/1‑94 (MQ=60)
AGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGCGATATTGCGCACAC > SRR4302543.2568649/1‑94 (MQ=60)
CATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCG < SRR4302543.2807860/94‑1 (MQ=60)
CATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCG > SRR4302543.4486810/1‑94 (MQ=60)
CATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCG < SRR4302543.6774111/94‑1 (MQ=60)
CATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCC > SRR4302543.4486809/1‑94 (MQ=60)
CATCCACAGATAAGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCG < SRR4302543.2807861/94‑1 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC > SRR4302543.3449207/1‑94 (MQ=60)
ATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGC > SRR4302543.4618627/1‑94 (MQ=60)
TCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCT < SRR4302543.841166/94‑1 (MQ=60)
ACCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCT < SRR4302543.4205898/94‑1 (MQ=60)
CCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTG < SRR4302543.7790405/94‑1 (MQ=60)
CCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAACCAATGGTGATATTGCGCACATCGCTG > SRR4302543.4584618/1‑94 (MQ=60)
CACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGG < SRR4302543.3435511/94‑1 (MQ=60)
CACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGG > SRR4302543.5051211/1‑94 (MQ=60)
CACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGG < SRR4302543.462374/94‑1 (MQ=60)
CACAGATACGCCGCTGAACCGATAGTGAGAATGATACCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGG < SRR4302543.3136966/94‑1 (MQ=60)
ACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCGCATCGCTGGT > SRR4302543.4395227/1‑94 (MQ=60)
CAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTT > SRR4302543.5396188/1‑94 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCGCCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA < SRR4302543.1430510/94‑1 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA < SRR4302543.7682406/94‑1 (MQ=60)
AGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTA > SRR4302543.1389921/1‑94 (MQ=60)
GATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAA > SRR4302543.3293090/1‑94 (MQ=60)
ATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAC < SRR4302543.3782845/94‑1 (MQ=60)
ATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAAC < SRR4302543.2917227/94‑1 (MQ=60)
TACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGCCACACGCACAAAAGCAATGGTGCTATTGCGCACATCCCTGGTTAACC > SRR4302543.1813697/1‑94 (MQ=60)
ACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGCTAACCC > SRR4302543.7591562/1‑94 (MQ=60)
GCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCG > SRR4302543.6496644/1‑94 (MQ=60)
CGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCC < SRR4302543.5959504/94‑1 (MQ=60)
CGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGGTAACCCCGCC > SRR4302543.4049148/1‑94 (MQ=60)
CGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGGCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGGC > SRR4302543.7403243/1‑94 (MQ=60)
CTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAG < SRR4302543.635636/94‑1 (MQ=60)
CTGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAG < SRR4302543.6799646/94‑1 (MQ=60)
TGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGC > SRR4302543.5529846/1‑94 (MQ=60)
TGAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGC > SRR4302543.7497277/1‑94 (MQ=60)
GAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCA > SRR4302543.7968178/1‑94 (MQ=60)
GAACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCA > SRR4302543.6461586/1‑94 (MQ=60)
AACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTTATATTGCGCACATCGCTGGTTAACCCCGCCAGCAA > SRR4302543.5353883/1‑94 (MQ=60)
AACCGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAA < SRR4302543.3313879/94‑1 (MQ=60)
CGATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGA > SRR4302543.4789680/1‑94 (MQ=60)
GATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAG < SRR4302543.228768/94‑1 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG < SRR4302543.6594869/94‑1 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG > SRR4302543.5062112/1‑94 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG > SRR4302543.3104243/1‑94 (MQ=60)
ATAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGG > SRR4302543.5714466/1‑94 (MQ=60)
TAGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTACCCCCGCCAGCAACGAGGC < SRR4302543.7714322/94‑1 (MQ=60)
AGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCG > SRR4302543.6060550/1‑94 (MQ=60)
AGTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCG < SRR4302543.4269556/94‑1 (MQ=60)
GTGAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGC > SRR4302543.2128036/1‑94 (MQ=60)
GAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTA < SRR4302543.5476170/94‑1 (MQ=60)
GAGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTA > SRR4302543.3520291/1‑94 (MQ=60)
AGAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTAC > SRR4302543.5531121/1‑94 (MQ=60)
GAATGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACC < SRR4302543.1877349/94‑1 (MQ=60)
TGATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAG < SRR4302543.5351176/94‑1 (MQ=60)
ATCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTT > SRR4302543.2991404/1‑94 (MQ=60)
TCCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTG > SRR4302543.489773/1‑94 (MQ=60)
CCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGT > SRR4302543.4001662/1‑94 (MQ=60)
CCCCTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGT < SRR4302543.3882719/94‑1 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302543.1265455/1‑94 (MQ=60)
CTGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCA > SRR4302543.239083/1‑94 (MQ=60)
TGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAAGGAGGCGCTACCGAGTTGTTCAA < SRR4302543.1397976/94‑1 (MQ=60)
TGCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAA < SRR4302543.5615233/94‑1 (MQ=60)
GCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302543.2826096/94‑1 (MQ=60)
GCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302543.5466567/94‑1 (MQ=60)
GCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302543.728330/94‑1 (MQ=60)
GCACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302543.3717607/94‑1 (MQ=60)
GCACCAGGCCCGGCAGACGCACAAAAGCAATGGTGATATTGCCCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAAT < SRR4302543.2304133/94‑1 (MQ=60)
CACCAGTCCCGGCAGACGCACAAAAGCGATGGTGATATTCCGCACTTCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATG < SRR4302543.7370079/94‑1 (MQ=60)
CACCAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATG > SRR4302543.2361573/1‑94 (MQ=60)
CAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCCCATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC < SRR4302543.1525352/94‑1 (MQ=60)
CAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGGGTTGTTCAATGCGC > SRR4302543.4697357/1‑94 (MQ=60)
CAGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGC < SRR4302543.3003863/94‑1 (MQ=60)
AGTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCT > SRR4302543.932830/1‑94 (MQ=60)
GTCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTC > SRR4302543.2960283/1‑94 (MQ=60)
TCCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCG < SRR4302543.3017223/94‑1 (MQ=60)
CCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA < SRR4302543.4230647/94‑1 (MQ=60)
CCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA > SRR4302543.1155924/1‑94 (MQ=60)
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GCCATCCAGATAGCCGTTACCAGCAACATTTTGCCCGACAGCATCCACAGATACGCCGCTGAACCGATAGTGAGAATGATCCCCTGCACCAGTTCCGGCAGACGCACAAAAGCAATGGTGATATTGCGCACATCGCTGGTTAACCCCGCCAGCAACGAGGCGCTACCGAGTTGTTCAATGCGCTCGA > NC_000913/2306163‑2306349
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
