Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,004,502	T→C	R49R (CGT→CGC)	ygeW →	putative carbamoyl transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,004,502	0	T	C	99.7%	960.4 / ‑6.1	312	R49R (CGT→CGC)	ygeW	putative carbamoyl transferase
Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (171/140); total (172/140)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 338 total aligned reads displayed.

AGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCG  >  NC_000913/3004412‑3004590

agcaTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAATGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAc                                                                                        <  1:3934549/93‑1 (MQ=255)

agcaTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAc                                                                                        <  1:4761364/93‑1 (MQ=255)

 gcaTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAcc                                                                                       <  2:1632141/93‑1 (MQ=255)

 gcaTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAcc                                                                                       >  2:2655396/1‑93 (MQ=255)

 gcaTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAcc                                                                                       >  1:2469167/1‑93 (MQ=255)

  caTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAccc                                                                                      >  2:7933584/1‑93 (MQ=255)

   aTTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCcacccgcacccg                                                                                     >  2:2562397/1‑93 (MQ=255)

    ttAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCacccgcacccgc                                                                                    <  1:2555108/93‑1 (MQ=255)

       aaaGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTtc                                                                                 <  1:1005480/93‑1 (MQ=255)

        aaGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTtct                                                                                >  1:1646775/1‑93 (MQ=255)

         aGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACACCTCCCCCCGCACCCGCTtctc                                                                               <  2:441720/93‑1 (MQ=255)

         aGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTtcac                                                                               >  2:6909714/1‑91 (MQ=255)

            aCTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTa                                                                            <  1:6198896/93‑1 (MQ=255)

            aCTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTa                                                                            <  2:6277435/93‑1 (MQ=255)

            aCTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTa                                                                            >  1:6733321/1‑93 (MQ=255)

            aCTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTa                                                                            >  2:47303/1‑93 (MQ=255)

            aCTGCGTGCCGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTa                                                                            >  2:2077965/1‑93 (MQ=255)

             cTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAt                                                                           <  2:4366149/93‑1 (MQ=255)

                cGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCt                                                                        >  1:5278843/1‑93 (MQ=255)

                 gTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCtt                                                                       >  2:5907318/1‑93 (MQ=255)

                 gTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCtt                                                                       <  1:4955413/93‑1 (MQ=255)

                  tGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTc                                                                      <  2:7848104/93‑1 (MQ=255)

                    cTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcg                                                                    >  2:609186/1‑93 (MQ=255)

                     tGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgc                                                                   <  2:5039212/93‑1 (MQ=255)

                     tGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgc                                                                   <  2:3663866/93‑1 (MQ=255)

                     tGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgc                                                                   >  2:1573979/1‑93 (MQ=255)

                     tGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgc                                                                   >  2:1396752/1‑93 (MQ=255)

                      gAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgcg                                                                  >  2:2954946/1‑93 (MQ=255)

                      gAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgcg                                                                  >  1:7345824/1‑93 (MQ=255)

                      gAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACCCCACCCGCACCCGCTTCTCTTATGCTTCcgcg                                                                  <  1:3406968/93‑1 (MQ=255)

                      gAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGGATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgcg                                                                  >  2:194327/1‑93 (MQ=255)

                      gAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAAGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCcgcg                                                                  >  2:1455719/1‑93 (MQ=255)

                       aaaaCATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCgcgc                                                                 <  1:7606308/93‑1 (MQ=255)

                       aaaaCATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCgcgc                                                                 >  2:3908246/1‑93 (MQ=255)

                       aaaaCATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCgcgc                                                                 >  1:5958547/1‑93 (MQ=255)

                        aaaCATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCt                                                                >  1:5678399/1‑93 (MQ=255)

                        aaaCATCTCAACCAAAGTCTTTAATAGGGGATTAGGTATTTCCGTATTCCGCGCCACCTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCt                                                                >  2:4121785/1‑93 (MQ=255)

                         aaCATCTCAACCAAAGGCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCtt                                                               >  2:7505277/1‑93 (MQ=255)

                           cATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTaa                                                             >  1:5838842/1‑93 (MQ=255)

                            aTCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAAc                                                            >  1:6690604/1‑93 (MQ=255)

                             tctcAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCCCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAAcc                                                           <  1:3845073/93‑1 (MQ=255)

                             tctcAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAAcc                                                           >  2:6665409/1‑93 (MQ=255)

                               tcAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTg                                                         >  1:4195382/1‑93 (MQ=255)

                               tcAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTg                                                         >  2:125624/1‑93 (MQ=255)

                                cAACCAAAGTCTTTAATAGTGTATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGc                                                        >  1:1371555/1‑93 (MQ=255)

                                cAACCAAAGTCTTTAATAGTGTATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTGCCGCTCTTAACCTGc                                                        <  2:5330248/93‑1 (MQ=255)

                                 aaCCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCt                                                       >  1:1017980/1‑93 (MQ=255)

                                  aCCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTc                                                      <  2:4926630/93‑1 (MQ=255)

                                   ccAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCg                                                     >  1:7779839/1‑93 (MQ=255)

                                   ccAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCg                                                     >  2:5396532/1‑93 (MQ=255)

                                     aaaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGc                                                   >  2:7186718/1‑93 (MQ=255)

                                     aaaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGc                                                   >  2:457128/1‑93 (MQ=255)

                                     aaaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGc                                                   >  1:1442615/1‑93 (MQ=255)

                                      aaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGcc                                                  >  1:7732050/1‑93 (MQ=255)

                                      aaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGcc                                                  >  1:6065569/1‑93 (MQ=255)

                                      aaGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGcc                                                  <  2:1732311/93‑1 (MQ=255)

                                       aGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCt                                                 <  1:7531568/93‑1 (MQ=255)

                                         tCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTg                                               >  1:705638/1‑93 (MQ=255)

                                             tAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGcaca                                           >  2:920764/1‑93 (MQ=255)

                                                 aGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCAcaacaa                                       >  1:1222611/1‑93 (MQ=255)

                                                  gTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAg                                      <  1:234977/93‑1 (MQ=255)

                                                    ggATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCGCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAt                                    <  2:3197066/93‑1 (MQ=255)

                                                     gATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAtc                                   <  2:5602226/93‑1 (MQ=255)

                                                     gATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAtc                                   <  1:4354752/93‑1 (MQ=255)

                                                      aTTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAtct                                  >  1:7837257/1‑93 (MQ=255)

                                                       ttAGGTATTTCCGTATTCCGCGACACCTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAtctc                                 <  2:7246972/93‑1 (MQ=255)

                                                             aTTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTCTGCTTCCGCGCTTAAACTGCTCGGCCTTGCACAACAAGATCTCGACGaa                           >  2:3505896/1‑93 (MQ=255)

                                                             aTTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGaa                           <  1:5761892/93‑1 (MQ=255)

                                                              tttCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAg                          <  1:1042029/93‑1 (MQ=255)

                                                              tttCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAg                          >  1:5145846/1‑93 (MQ=255)

                                                              tttCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAg                          >  1:6365199/1‑93 (MQ=255)

                                                               ttCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAgg                         <  1:3562240/93‑1 (MQ=255)

                                                                tCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGc                        <  2:1814301/93‑1 (MQ=255)

                                                                tCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGc                        >  2:3461144/1‑93 (MQ=255)

                                                                  cttATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCaa                      <  1:3184103/91‑1 (MQ=255)

                                                                  cGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCaa                      >  1:2105864/1‑93 (MQ=255)

                                                                   gTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCaaa                     >  2:3328024/1‑93 (MQ=255)

                                                                   gTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCaaa                     <  1:2878146/93‑1 (MQ=255)

                                                                    tATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAt                    >  1:4053682/1‑93 (MQ=255)

                                                                    tATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAt                    >  2:5752699/1‑93 (MQ=255)

                                                                    gaTTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAt                    <  1:805067/92‑1 (MQ=255)

                                                                      ttCCGCGACACCTCCCCCCGCCCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATca                  <  2:5099708/93‑1 (MQ=255)

                                                                        ccGCGACAACTCCACCCGCCCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATcaca                <  2:2435044/93‑1 (MQ=255)

                                                                         cgcgACAACTCCACCCGCACCCTCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACaa               <  1:1878141/93‑1 (MQ=255)

                                                                             aCAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACatattg           >  1:6779390/1‑91 (MQ=255)

                                                                              cAACTCCCCCCCCACCCGCTTCTCTTATGCTTCCGCGCCTAACCTGCCCGGCCTTGCACAACAAGGTCTTGACGAAGGCAAATCACAAATCGc          <  2:6974770/93‑1 (MQ=255)

                                                                                aCTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTc        <  2:6459126/93‑1 (MQ=255)

                                                                                aCTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTc        >  2:1119154/1‑93 (MQ=255)

                                                                                 cTCCCCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCa       <  2:322095/93‑1 (MQ=255)

                                                                                 cTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCa       <  2:3056589/93‑1 (MQ=255)

                                                                                 cTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCa       <  2:6735963/93‑1 (MQ=255)

                                                                                 cTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCa       <  1:6431336/93‑1 (MQ=255)

                                                                                 cTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCa       >  1:6987137/1‑93 (MQ=255)

                                                                                  tCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAc      >  1:3634689/1‑93 (MQ=255)

                                                                                  tCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAc      <  1:2852779/93‑1 (MQ=255)

                                                                                  cccACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAc      <  1:923314/92‑1 (MQ=255)

                                                                                  cccACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTACTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAc      <  1:2742748/92‑1 (MQ=255)

                                                                                   ccccccGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACg     <  1:4463149/90‑1 (MQ=255)

                                                                                   ccACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACg     <  2:1899329/93‑1 (MQ=255)

                                                                                     acccgcacccgcTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGc   >  2:3540160/1‑93 (MQ=255)

AGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCG  >  NC_000913/3004412‑3004590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  >  NC_000913/3004409‑3004595

CGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGC                                                                                               <  SRR4302543.3820705/94‑1 (MQ=60)

CGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGC                                                                                               <  SRR4302543.6597101/94‑1 (MQ=60)

CGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGC                                                                                               >  SRR4302543.7316070/1‑94 (MQ=60)

  CAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCAC                                                                                             >  SRR4302543.5752615/1‑94 (MQ=60)

   AGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAATGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACC                                                                                            <  SRR4302543.3969309/94‑1 (MQ=60)

   AGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACC                                                                                            <  SRR4302543.4804874/94‑1 (MQ=60)

   AGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACC                                                                                            >  SRR4302543.2491451/1‑94 (MQ=60)

     CATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCG                                                                                          >  SRR4302543.5958645/1‑94 (MQ=60)

      ATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGC                                                                                         >  SRR4302543.7903645/1‑94 (MQ=60)

      ATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGC                                                                                         >  SRR4302543.7479361/1‑94 (MQ=60)

       TTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCT                                                                                        <  SRR4302543.2578470/94‑1 (MQ=60)

       TTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCT                                                                                        >  SRR4302543.1475315/1‑94 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCT                                                                                     <  SRR4302543.1014608/94‑1 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCT                                                                                     <  SRR4302543.6366477/94‑1 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCT                                                                                     >  SRR4302543.1661499/1‑94 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCT                                                                                     <  SRR4302543.1014371/94‑1 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCT                                                                                     >  SRR4302543.1297079/1‑94 (MQ=60)

          AAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGCATTTCCGTATTCCGCGATAACTCCACCCGCACCCGCTTCT                                                                                     >  SRR4302543.7587805/1‑94 (MQ=60)

            AGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCT                                                                                   <  SRR4302543.2328606/94‑1 (MQ=60)

              CACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTA                                                                                 >  SRR4302543.6796931/1‑94 (MQ=60)

              CACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTA                                                                                 >  SRR4302543.5662797/1‑94 (MQ=60)

              CACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTA                                                                                 >  SRR4302543.3618225/1‑94 (MQ=60)

              CACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTA                                                                                 >  SRR4302543.6796932/1‑94 (MQ=60)

              CACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTA                                                                                 >  SRR4302543.2588168/1‑94 (MQ=60)

               ACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAT                                                                                >  SRR4302543.7783517/1‑94 (MQ=60)

               ACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAT                                                                                <  SRR4302543.6257445/94‑1 (MQ=60)

               ACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAT                                                                                <  SRR4302543.2881909/94‑1 (MQ=60)

               ACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAT                                                                                <  SRR4302543.6066059/94‑1 (MQ=60)

               ACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTAT                                                                                <  SRR4302543.3004745/94‑1 (MQ=60)

                CTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATG                                                                               >  SRR4302543.6953147/1‑94 (MQ=60)

                CTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATG                                                                               >  SRR4302543.3957304/1‑94 (MQ=60)

                 TGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGC                                                                              >  SRR4302543.1676754/1‑94 (MQ=60)

                  GCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCT                                                                             >  SRR4302543.5326478/1‑94 (MQ=60)

                   CGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTT                                                                            >  SRR4302543.1442532/1‑94 (MQ=60)

                    GTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTC                                                                           <  SRR4302543.5000537/94‑1 (MQ=60)

                       CTGAAAACATCTCAACCAAAGTCTTTAATAGCGGATTAGGCATTTCCGTATTCCGCGCCAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGC                                                                        >  SRR4302543.2807383/1‑94 (MQ=60)

                        TGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCG                                                                       >  SRR4302543.7416491/1‑94 (MQ=60)

                        TGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCG                                                                       <  SRR4302543.1607348/94‑1 (MQ=60)

                         GAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGC                                                                      >  SRR4302543.6823320/1‑94 (MQ=60)

                         GAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGC                                                                      >  SRR4302543.6013084/1‑94 (MQ=60)

                         GAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGC                                                                      >  SRR4302543.6013086/1‑94 (MQ=60)

                         GAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACCCCACCCGCACCCGCTTCTCTTATGCTTCCGCGC                                                                      <  SRR4302543.3437475/94‑1 (MQ=60)

                          AAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCT                                                                     >  SRR4302543.5730231/1‑94 (MQ=60)

                          AAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCT                                                                     <  SRR4302543.7678527/94‑1 (MQ=60)

                            AACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCCCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTA                                                                   <  SRR4302543.4142428/94‑1 (MQ=60)

                             ACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAA                                                                  >  SRR4302543.5891956/1‑94 (MQ=60)

                              CATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAAC                                                                 >  SRR4302543.6753761/1‑94 (MQ=60)

                              CATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAAC                                                                 >  SRR4302543.6754016/1‑94 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                >  SRR4302543.4608728/1‑94 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                >  SRR4302543.3002838/1‑94 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                >  SRR4302543.4219741/1‑94 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                >  SRR4302543.2381685/1‑94 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                <  SRR4302543.5741702/94‑1 (MQ=60)

                               ATCTCAACCAAAGTCTTTAATAGTGGATTAGGCATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACC                                                                <  SRR4302543.4435031/94‑1 (MQ=60)

                                TCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCCCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCT                                                               <  SRR4302543.3879029/94‑1 (MQ=60)

                                TCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCT                                                               <  SRR4302543.4955857/94‑1 (MQ=60)

                                TCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCT                                                               <  SRR4302543.1020566/94‑1 (MQ=60)

                                 CTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTG                                                              >  SRR4302543.4233420/1‑94 (MQ=60)

                                 CTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTG                                                              <  SRR4302543.6143712/94‑1 (MQ=60)

                                 CTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTG                                                              <  SRR4302543.2502825/94‑1 (MQ=60)

                                 CTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTG                                                              <  SRR4302543.7849160/94‑1 (MQ=60)

                                 CTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTC                                                              >  SRR4302543.4120176/1‑94 (MQ=60)

                                  TCAACCAAAGTCTTTAATAGTGTATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGC                                                             >  SRR4302543.1383877/1‑94 (MQ=60)

                                  TCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGC                                                             >  SRR4302543.2854821/1‑94 (MQ=60)

                                  CCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGC                                                             <  SRR4302543.5842799/94‑1 (MQ=60)

                                   CAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCT                                                            >  SRR4302543.1026983/1‑94 (MQ=60)

                                   CAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCT                                                            <  SRR4302543.6380193/94‑1 (MQ=60)

                                   CAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCT                                                            <  SRR4302543.1926354/94‑1 (MQ=60)

                                    AACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTC                                                           <  SRR4302543.5234246/94‑1 (MQ=60)

                                    AACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTC                                                           >  SRR4302543.7069842/1‑94 (MQ=60)

                                     ACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCTCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCG                                                          <  SRR4302543.5411996/94‑1 (MQ=60)

                                     ACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCG                                                          <  SRR4302543.3397376/94‑1 (MQ=60)

                                     ACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCG                                                          <  SRR4302543.7933686/94‑1 (MQ=60)

                                     ACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCG                                                          >  SRR4302543.7853199/1‑94 (MQ=60)

                                      CCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGG                                                         >  SRR4302543.7650584/1‑94 (MQ=60)

                                      CCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGG                                                         >  SRR4302543.32847/1‑94 (MQ=60)

                                      CCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGG                                                         >  SRR4302543.7517727/1‑94 (MQ=60)

                                       CAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGC                                                        >  SRR4302543.1455644/1‑94 (MQ=60)

                                       CAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGC                                                        >  SRR4302543.1047387/1‑94 (MQ=60)

                                        AAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCC                                                       >  SRR4302543.980209/1‑94 (MQ=60)

                                        AAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCC                                                       >  SRR4302543.6123047/1‑94 (MQ=60)

                                        AAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCC                                                       >  SRR4302543.7805117/1‑94 (MQ=60)

                                        AAAGTCTTTAATAGTGGATTAGGCATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCC                                                       >  SRR4302543.3985706/1‑94 (MQ=60)

                                          AGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTT                                                     <  SRR4302543.7603395/94‑1 (MQ=60)

                                          AGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTT                                                     <  SRR4302543.671466/94‑1 (MQ=60)

                                          AGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTT                                                     <  SRR4302543.7881125/94‑1 (MQ=60)

                                           GTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTG                                                    >  SRR4302543.712067/1‑94 (MQ=60)

                                           GTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTG                                                    <  SRR4302543.6595367/94‑1 (MQ=60)

                                             CTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCA                                                  >  SRR4302543.1897143/1‑94 (MQ=60)

                                             CTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCA                                                  >  SRR4302543.3876677/1‑94 (MQ=60)

                                              TTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCAC                                                 <  SRR4302543.1162491/94‑1 (MQ=60)

                                                 AATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAAC                                              >  SRR4302543.7412061/1‑94 (MQ=60)

                                                 AATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAAC                                              >  SRR4302543.430902/1‑94 (MQ=60)

                                                   TAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAA                                            >  SRR4302543.1233600/1‑94 (MQ=60)

                                                   TAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAA                                            >  SRR4302543.3853058/1‑94 (MQ=60)

                                                     GTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGA                                          <  SRR4302543.237007/94‑1 (MQ=60)

                                                      TGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGAT                                         <  SRR4302543.178238/94‑1 (MQ=60)

                                                       GGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATC                                        >  SRR4302543.1171469/1‑94 (MQ=60)

                                                        GATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCT                                       <  SRR4302543.4394214/94‑1 (MQ=60)

                                                        GATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCT                                       >  SRR4302543.6004901/1‑94 (MQ=60)

                                                        GATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCT                                       >  SRR4302543.7911021/1‑94 (MQ=60)

                                                         ATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTC                                      <  SRR4302543.898055/94‑1 (MQ=60)

                                                         ATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTC                                      >  SRR4302543.7390103/1‑94 (MQ=60)

                                                         ATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTC                                      <  SRR4302543.4404872/94‑1 (MQ=60)

                                                         ATTAGGTATTTCCGTATCCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTCCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTC                                      <  SRR4302543.7942043/94‑1 (MQ=60)

                                                          TTAGGTATTTCCGTATTCCGCGACATCTCCTCCCGCGCCCGCTTCTCTTATGCTGCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCG                                     <  SRR4302543.2891578/94‑1 (MQ=60)

                                                          TTAGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCG                                     <  SRR4302543.7947529/94‑1 (MQ=60)

                                                            AGGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGAC                                   >  SRR4302543.1136166/1‑94 (MQ=60)

                                                             GGTATTTCCGTATTCCGCGACAACTCCACCCGCGCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACG                                  <  SRR4302543.7104733/94‑1 (MQ=60)

                                                             GGTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACG                                  >  SRR4302543.6754819/1‑94 (MQ=60)

                                                              GTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGA                                 >  SRR4302543.363456/1‑94 (MQ=60)

                                                              GTATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGA                                 >  SRR4302543.7778782/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               <  SRR4302543.4336078/94‑1 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.6425059/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.6425061/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.2522393/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.6425062/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               <  SRR4302543.7014673/94‑1 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.3238265/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               <  SRR4302543.5814382/94‑1 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               <  SRR4302543.3563056/94‑1 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               >  SRR4302543.5192362/1‑94 (MQ=60)

                                                                ATTTCCGTATTCCGCGACAACGCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAG                               <  SRR4302543.3563055/94‑1 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGG                              >  SRR4302543.877257/1‑94 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGG                              >  SRR4302543.7747114/1‑94 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGG                              <  SRR4302543.7849630/94‑1 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGG                              <  SRR4302543.700077/94‑1 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGG                              <  SRR4302543.1051316/94‑1 (MQ=60)

                                                                 TTTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCATTGCACAACAAGATCTCGACGAAGG                              <  SRR4302543.622039/94‑1 (MQ=60)

                                                                  TTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACCACACGATCTCGACGAAGGC                             >  SRR4302543.5099292/1‑94 (MQ=60)

                                                                  TTCCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGC                             <  SRR4302543.3593775/94‑1 (MQ=60)

                                                                    CCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAA                           <  SRR4302543.1333952/94‑1 (MQ=60)

                                                                    CCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAA                           >  SRR4302543.4759120/1‑94 (MQ=60)

                                                                    CCGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAA                           >  SRR4302543.2124705/1‑94 (MQ=60)

                                                                     CTTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAA                          <  SRR4302543.3212816/94‑1 (MQ=60)

                                                                     CGTATTCCGCGACAACTCCACCGTCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAA                          >  SRR4302543.1410671/1‑94 (MQ=60)

                                                                     CGTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAA                          >  SRR4302543.1030466/1‑94 (MQ=60)

                                                                      GTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAT                         >  SRR4302543.766431/1‑94 (MQ=60)

                                                                      GTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAT                         >  SRR4302543.4089961/1‑94 (MQ=60)

                                                                      GTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAT                         <  SRR4302543.2904336/94‑1 (MQ=60)

                                                                      GTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAT                         <  SRR4302543.1516383/94‑1 (MQ=60)

                                                                      GTATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAAT                         >  SRR4302543.5311935/1‑94 (MQ=60)

                                                                       TATTCCGCGACAACTCCCCCCGCCCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATC                        <  SRR4302543.373764/94‑1 (MQ=60)

                                                                       TATTCCGCGACAACTCCACCTGCACCCGCTGCTCTTATGCTCCCGCGCTTcaccttctccgcgttgtccaacgagatctcgcctacaggcactc                        >  SRR4302543.6483178/1‑50 (MQ=28)

                                                                       TATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATC                        >  SRR4302543.6483179/1‑94 (MQ=60)

                                                                       GATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATC                        <  SRR4302543.812149/94‑1 (MQ=60)

                                                                        ATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCA                       <  SRR4302543.5153196/94‑1 (MQ=60)

                                                                        ATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCA                       >  SRR4302543.5922837/1‑94 (MQ=60)

                                                                        ATTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCA                       >  SRR4302543.4822310/1‑94 (MQ=60)

                                                                         TTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCAC                      <  SRR4302543.1913686/94‑1 (MQ=60)

                                                                         TTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCAC                      <  SRR4302543.2896753/94‑1 (MQ=60)

                                                                         TTCCGCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCAC                      <  SRR4302543.440194/94‑1 (MQ=60)

                                                                            CGCGACAACTCCACCCGCACCCTCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAA                   <  SRR4302543.1895015/94‑1 (MQ=60)

                                                                             GCGACACCTCCTCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAAT                  <  SRR4302543.2557130/94‑1 (MQ=60)

                                                                             GCGACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAAT                  <  SRR4302543.5176222/94‑1 (MQ=60)

                                                                               GACAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAtattg                >  SRR4302543.6843413/1‑89 (MQ=60)

                                                                                 CAACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCT              >  SRR4302543.4012358/1‑94 (MQ=60)

                                                                                   ACTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCA            >  SRR4302543.7052896/1‑94 (MQ=60)

                                                                                    CTCCTCCCGCGCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAC           <  SRR4302543.5560059/94‑1 (MQ=60)

                                                                                    CTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAC           <  SRR4302543.6527838/94‑1 (MQ=60)

                                                                                    CTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAC           >  SRR4302543.3666679/1‑94 (MQ=60)

                                                                                    CTCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCAC           <  SRR4302543.6491934/94‑1 (MQ=60)

                                                                                     TCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACG          <  SRR4302543.2878814/94‑1 (MQ=60)

                                                                                     CCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACG          <  SRR4302543.931395/94‑1 (MQ=60)

                                                                                     CCCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTACTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACG          <  SRR4302543.2767690/94‑1 (MQ=60)

                                                                                      CCCCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGG         <  SRR4302543.4503590/94‑1 (MQ=60)

                                                                                      CCACCCGCCCCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGG         <  SRR4302543.2428549/94‑1 (MQ=60)

                                                                                      CCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGG         >  SRR4302543.2331747/1‑94 (MQ=60)

                                                                                      CCACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGG         <  SRR4302543.3946285/94‑1 (MQ=60)

                                                                                       CACCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGC        <  SRR4302543.2672294/94‑1 (MQ=60)

                                                                                        CCCCGCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCG       <  SRR4302543.5841683/94‑1 (MQ=60)

                                                                                            GCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAAC   <  SRR4302543.5396712/94‑1 (MQ=60)

                                                                                            GCACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAAC   <  SRR4302543.2952892/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.1255241/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.5130230/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.6089545/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.2072288/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.6806965/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.1627550/94‑1 (MQ=60)

                                                                                             CACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  <  SRR4302543.5664969/94‑1 (MQ=60)

CGCAGCATTAAAAGCACTGCGTGCTGAAAACATCTCAACCAAAGTCTTTAATAGTGGATTAGGTATTTCCGTATTCCGCGACAACTCCACCCGTACCCGCTTCTCTTATGCTTCCGCGCTTAACCTGCTCGGCCTTGCACAACAAGATCTCGACGAAGGCAAATCACAAATCGCTCACGGCGAAACC  >  NC_000913/3004409‑3004595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`