Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	1696	279.3	15874187	97.8%	15524954	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,018,487	C→T	R436C (CGT→TGT)	b2879 →	putative proteoglycan

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,018,487	0	C	T	99.7%	1265.2 / ‑5.9	356	R436C (CGT→TGT)	b2879	putative proteoglycan
Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (151/203); total (152/204)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.06e-01

Only 100 of 367 total aligned reads displayed.

AATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTT  >  NC_000913/3018397‑3018576

aaTGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGgtgt                                                                                         >  1:5270585/1‑93 (MQ=255)

 aTGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTc                                                                                        <  2:3226492/93‑1 (MQ=255)

  tGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCg                                                                                       >  2:3040867/1‑93 (MQ=255)

   ggTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCgg                                                                                      >  2:7574745/1‑93 (MQ=255)

    gtgtGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCgga                                                                                     >  1:1508619/1‑93 (MQ=255)

      gtgATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatg                                                                                   <  2:7750713/93‑1 (MQ=255)

      gtgATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatg                                                                                   <  1:661966/93‑1 (MQ=255)

      gtgATGGTCTATGAAGACCCTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatg                                                                                   <  1:1182775/93‑1 (MQ=255)

        gATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatgga                                                                                 <  1:4039198/93‑1 (MQ=255)

        gATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatgga                                                                                 >  1:5135845/1‑93 (MQ=255)

        gATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatgga                                                                                 <  2:3417609/93‑1 (MQ=255)

         aTGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCAAAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCggatggat                                                                                <  2:5711677/93‑1 (MQ=255)

          tGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGgatggatg                                                                               >  2:3578633/1‑93 (MQ=255)

              cTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCt                                                                           <  1:5464635/93‑1 (MQ=255)

                 tGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGc                                                                        >  2:6370658/1‑93 (MQ=255)

                    aGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATa                                                                     >  2:5118018/1‑93 (MQ=255)

                     gACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATaa                                                                    >  2:256556/1‑93 (MQ=255)

                     gACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATaa                                                                    >  2:875049/1‑93 (MQ=255)

                      aCCGTCAGTTTAACTTCGATTGCGATTCCATTTAGGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATaaa                                                                   <  1:1620403/93‑1 (MQ=255)

                        cGTCAGTTTAACTTAGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATg                                                                 <  1:7920625/93‑1 (MQ=255)

                         gTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGa                                                                >  2:5420167/1‑93 (MQ=255)

                         gTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGa                                                                >  1:2107162/1‑93 (MQ=255)

                          tCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGAc                                                               <  2:5949697/93‑1 (MQ=255)

                          tCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGAc                                                               <  1:2883623/93‑1 (MQ=255)

                            aGTTTAACTTCGATGGCGATCCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAg                                                             <  2:2237592/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  2:7863419/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  1:7307981/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  2:4833781/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  2:5003427/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  2:5331773/93‑1 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            >  1:1722009/1‑93 (MQ=255)

                             gTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCAAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGa                                                            <  2:2064970/93‑1 (MQ=255)

                              tttAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGAt                                                           <  1:6174708/93‑1 (MQ=255)

                                tAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGc                                                         <  2:134158/93‑1 (MQ=255)

                                  aCTTCGATTGCGTTTCCTTATATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGACTAAAAGAAAGAtaacc                                                       <  2:7031191/93‑5 (MQ=255)

                                  aCTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGAGCTGGCATAAATGACAGATGccc                                                       >  2:3840702/1‑93 (MQ=255)

                                   cTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCct                                                      <  1:2501643/93‑1 (MQ=255)

                                   cTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCct                                                      >  1:326009/1‑93 (MQ=255)

                                    ttCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCctc                                                     <  1:4737200/93‑1 (MQ=255)

                                     tCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCctct                                                    <  1:4396530/93‑1 (MQ=255)

                                       gATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTc                                                  <  1:1020814/93‑1 (MQ=255)

                                        aTTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTcc                                                 >  1:3991809/1‑93 (MQ=255)

                                        aTTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTcc                                                 >  1:156574/1‑93 (MQ=255)

                                         ttGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTccc                                                <  2:6038653/93‑1 (MQ=255)

                                         ttGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTccc                                                >  2:1396719/1‑93 (MQ=255)

                                          tGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCg                                               >  1:7814784/1‑93 (MQ=255)

                                             gATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAg                                            <  2:1284723/93‑1 (MQ=255)

                                                tCCAGTTATGCAGAAGACAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGa                                         <  1:3316763/93‑1 (MQ=255)

                                                  cATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAag                                       <  1:3800277/93‑1 (MQ=255)

                                                  cATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAag                                       <  1:872685/93‑1 (MQ=255)

                                                   aTTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAagg                                      >  2:2149855/1‑92 (MQ=255)

                                                   aTTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAaga                                      <  2:6142721/93‑1 (MQ=255)

                                                   aTTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAaga                                      >  2:2612905/1‑93 (MQ=255)

                                                    tttATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAagag                                     <  1:3104640/93‑1 (MQ=255)

                                                      tATGCACAAGGCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAggg                                   <  1:4206168/93‑1 (MQ=255)

                                                      tATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAggg                                   >  2:7702243/1‑93 (MQ=255)

                                                      tATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAggg                                   >  2:6594053/1‑93 (MQ=255)

                                                       aTGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGt                                  <  2:1698586/93‑1 (MQ=255)

                                                       aTGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGt                                  <  2:2403921/93‑1 (MQ=255)

                                                        tGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGtt                                 <  1:4494201/93‑1 (MQ=255)

                                                         gCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTa                                <  1:3480442/93‑1 (MQ=255)

                                                          cacaAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTaa                               <  2:1519386/93‑1 (MQ=255)

                                                           acacGCCAGAAAAGCCGCTGCGAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCATCTTCCCGCAGGGAATAGGGTTaaa                              <  2:6670270/93‑1 (MQ=255)

                                                           acaAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTaaa                              <  1:3040868/93‑1 (MQ=255)

                                                            caAGGCAGAAAAGCCCGTGCCAGTGTGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAAt                             <  1:6203570/93‑1 (MQ=255)

                                                             aaGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATa                            <  2:7650786/93‑1 (MQ=255)

                                                             aaGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATa                            >  1:183014/1‑93 (MQ=255)

                                                             aaGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATa                            <  1:7008025/93‑1 (MQ=255)

                                                              aGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATaa                           <  2:1975405/93‑1 (MQ=255)

                                                              aGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATaa                           <  1:490054/93‑1 (MQ=255)

                                                              aGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATaa                           <  1:5756779/93‑1 (MQ=255)

                                                                 cAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGa                        <  2:7334054/93‑1 (MQ=255)

                                                                  aGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGaa                       <  2:42392/93‑1 (MQ=255)

                                                                   gAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGaaa                      >  1:1288805/1‑93 (MQ=255)

                                                                    aaaaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaag                     >  2:4079343/1‑93 (MQ=255)

                                                                     aaaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaaga                    <  2:4784224/93‑1 (MQ=255)

                                                                      aaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaagaa                   <  2:1003275/93‑1 (MQ=255)

                                                                      aaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaagaa                   <  1:2981757/93‑1 (MQ=255)

                                                                      aaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaagaa                   <  1:2800997/93‑1 (MQ=255)

                                                                      aaGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAaagaa                   >  2:7115649/1‑93 (MQ=255)

                                                                         ccGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAgat                >  1:2537874/1‑93 (MQ=255)

                                                                         ccGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAgat                <  1:5070523/93‑1 (MQ=255)

                                                                          cGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAgatg               <  2:1833166/93‑1 (MQ=255)

                                                                           gCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAgatga              <  2:5232721/93‑1 (MQ=255)

                                                                           gCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAgatga              <  1:2189371/93‑1 (MQ=255)

                                                                             tGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGAtt            <  2:4352759/93‑1 (MQ=255)

                                                                             tGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGAtt            <  1:1902552/93‑1 (MQ=255)

                                                                             tGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGAtt            >  1:2243718/1‑93 (MQ=255)

                                                                             tGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGAtt            >  2:6793685/1‑93 (MQ=255)

                                                                             tGCCAGTATGTGGTGTCGGAT‑GATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGGAGAGGGGTAAATAAGGAAAGAAGATGATTg           >  2:3137173/1‑93 (MQ=255)

                                                                               ccAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGa          >  1:3372454/1‑93 (MQ=255)

                                                                                cAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGaa         >  1:5693067/1‑93 (MQ=255)

                                                                                 aGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAAc        <  2:3702895/93‑1 (MQ=255)

                                                                                  gTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACa       >  1:6323901/1‑93 (MQ=255)

                                                                                  gTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACa       >  1:2691311/1‑93 (MQ=255)

                                                                                  gTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACa       >  1:4313300/1‑93 (MQ=255)

                                                                                     tgtgGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAAtt    >  2:554192/1‑93 (MQ=255)

                                                                                     tgtgGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAAtt    <  2:4372638/93‑1 (MQ=255)

                                                                                     tgtgGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAAtt    <  1:7516183/93‑1 (MQ=255)

                                                                                      gtggtgTCGGATGGATGCGCTGACATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAAttt   <  2:4664788/93‑1 (MQ=255)

AATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTT  >  NC_000913/3018397‑3018576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  >  NC_000913/3018394‑3018580

GTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGT                                                                                               <  SRR4302543.387656/94‑1 (MQ=60)

GTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGT                                                                                               <  SRR4302543.4809953/94‑1 (MQ=60)

GTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGT                                                                                               <  SRR4302543.6848972/94‑1 (MQ=60)

 TCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTG                                                                                              <  SRR4302543.856814/94‑1 (MQ=60)

  CAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGT                                                                                             <  SRR4302543.3934655/94‑1 (MQ=60)

  CAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGT                                                                                             >  SRR4302543.2453206/1‑94 (MQ=60)

  CAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGT                                                                                             >  SRR4302543.831776/1‑94 (MQ=60)

  CAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGT                                                                                             >  SRR4302543.5318133/1‑94 (MQ=60)

    ATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCG                                                                                           >  SRR4302543.4917030/1‑94 (MQ=60)

     TGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGG                                                                                          <  SRR4302543.813933/94‑1 (MQ=60)

     TGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGG                                                                                          >  SRR4302543.4123638/1‑94 (MQ=60)

      GGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGA                                                                                         >  SRR4302543.1522167/1‑94 (MQ=60)

        TGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATG                                                                                       <  SRR4302543.2985542/94‑1 (MQ=60)

        TGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATG                                                                                       >  SRR4302543.58610/1‑94 (MQ=60)

        TGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATG                                                                                       <  SRR4302543.1539103/94‑1 (MQ=60)

        TGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATG                                                                                       <  SRR4302543.4419777/94‑1 (MQ=60)

         GTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGG                                                                                      >  SRR4302543.5280032/1‑94 (MQ=60)

         GTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGG                                                                                      <  SRR4302543.668048/94‑1 (MQ=60)

         GTGATGGTCTATGAAGACCCTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGG                                                                                      <  SRR4302543.1193462/94‑1 (MQ=60)

          TGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGA                                                                                     >  SRR4302543.5182270/1‑94 (MQ=60)

           GATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGAT                                                                                    <  SRR4302543.2638969/94‑1 (MQ=60)

           GATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGAT                                                                                    <  SRR4302543.3959963/94‑1 (MQ=60)

           GATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGAT                                                                                    <  SRR4302543.4075350/94‑1 (MQ=60)

           GATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGAT                                                                                    <  SRR4302543.874027/94‑1 (MQ=60)

           GATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGAT                                                                                    <  SRR4302543.1626580/94‑1 (MQ=60)

            ATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATG                                                                                   >  SRR4302543.7931030/1‑94 (MQ=60)

             TGGTCTATGAAGACTGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCGGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGC                                                                                  <  SRR4302543.1696950/94‑1 (MQ=60)

              GGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCG                                                                                 <  SRR4302543.3312754/94‑1 (MQ=60)

                 CTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTG                                                                              >  SRR4302543.2225365/1‑94 (MQ=60)

                 CTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTG                                                                              <  SRR4302543.5514154/94‑1 (MQ=60)

                 CTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTG                                                                              >  SRR4302543.2118313/1‑94 (MQ=60)

                 CTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGGGTCGGATGGATGCGCTG                                                                              >  SRR4302543.4407736/1‑94 (MQ=60)

                   ATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGC                                                                            >  SRR4302543.5772524/1‑94 (MQ=60)

                   ATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGC                                                                            >  SRR4302543.3920379/1‑94 (MQ=60)

                    TGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCA                                                                           >  SRR4302543.4430045/1‑94 (MQ=60)

                    TGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCA                                                                           <  SRR4302543.6529849/94‑1 (MQ=60)

                     GAAGACCTTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCAT                                                                          <  SRR4302543.2524892/94‑1 (MQ=60)

                     GAAGACCGTCAGTTTAACGTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCAT                                                                          <  SRR4302543.789239/94‑1 (MQ=60)

                      AAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATA                                                                         >  SRR4302543.2772275/1‑94 (MQ=60)

                         ACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAAT                                                                      <  SRR4302543.2553416/94‑1 (MQ=60)

                         ACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAAT                                                                      <  SRR4302543.20901/94‑1 (MQ=60)

                         ACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAAT                                                                      <  SRR4302543.2151428/94‑1 (MQ=60)

                         ACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAAT                                                                      <  SRR4302543.3535108/94‑1 (MQ=60)

                         ACCGTCAGTTTAACTTCGATTGCGATTCCATTTAGGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAAT                                                                      <  SRR4302543.1634844/94‑1 (MQ=60)

                           CGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGA                                                                    >  SRR4302543.2126020/1‑94 (MQ=60)

                           CGTCAGTTTAACTTCGATTGCAATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGA                                                                    <  SRR4302543.6245594/94‑1 (MQ=60)

                           CGTCAGTTTAACTTAGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGA                                                                    <  SRR4302543.7995026/94‑1 (MQ=60)

                            GTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGAC                                                                   >  SRR4302543.2939562/1‑94 (MQ=60)

                            GTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGAC                                                                   <  SRR4302543.630791/94‑1 (MQ=60)

                             TCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACA                                                                  >  SRR4302543.301117/1‑94 (MQ=60)

                             TCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACA                                                                  <  SRR4302543.2909865/94‑1 (MQ=60)

                              CATTTTAACTTCGATTGCGATTCCATTTAGGCCCAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAG                                                                 <  SRR4302543.4745939/94‑1 (MQ=60)

                              CAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAG                                                                 >  SRR4302543.653410/1‑94 (MQ=60)

                               AGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGA                                                                <  SRR4302543.1861793/94‑1 (MQ=60)

                               AGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGA                                                                >  SRR4302543.1737368/1‑94 (MQ=60)

                               AGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGA                                                                >  SRR4302543.5176906/1‑94 (MQ=60)

                                GTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGAT                                                               <  SRR4302543.5680958/94‑1 (MQ=60)

                                GTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGAT                                                               <  SRR4302543.7378443/94‑1 (MQ=60)

                                GTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGAT                                                               <  SRR4302543.7552026/94‑1 (MQ=60)

                                GTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGAT                                                               >  SRR4302543.2972111/1‑94 (MQ=60)

                                 TTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATG                                                              <  SRR4302543.6233099/94‑1 (MQ=60)

                                 TTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATG                                                              <  SRR4302543.1753475/94‑1 (MQ=60)

                                  TTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGC                                                             >  SRR4302543.3364280/1‑94 (MQ=60)

                                    AACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGCTGCGCTGGCATAAATGACAGGTGCCC                                                           >  SRR4302543.1993834/1‑94 (MQ=60)

                                     ACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCT                                                          >  SRR4302543.328965/1‑94 (MQ=60)

                                      CTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTT                                                         >  SRR4302543.6010538/1‑94 (MQ=60)

                                      CTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTC                                                         >  SRR4302543.5018093/1‑94 (MQ=60)

                                      CTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTC                                                         <  SRR4302543.2524346/94‑1 (MQ=60)

                                       TTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCT                                                        <  SRR4302543.540366/94‑1 (MQ=60)

                                       TTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCT                                                        <  SRR4302543.4780489/94‑1 (MQ=60)

                                        TCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTT                                                       <  SRR4302543.4436388/94‑1 (MQ=60)

                                        TCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTT                                                       <  SRR4302543.4436389/94‑1 (MQ=60)

                                        TCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTT                                                       >  SRR4302543.1391360/1‑94 (MQ=60)

                                         CGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTC                                                      <  SRR4302543.5388509/94‑1 (MQ=60)

                                         CGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTC                                                      >  SRR4302543.1104291/1‑94 (MQ=60)

                                          GATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCC                                                     >  SRR4302543.4027320/1‑94 (MQ=60)

                                          GATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCC                                                     >  SRR4302543.983669/1‑94 (MQ=60)

                                          GATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCC                                                     <  SRR4302543.1029846/94‑1 (MQ=60)

                                          GATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCC                                                     <  SRR4302543.1222217/94‑1 (MQ=60)

                                          GATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCC                                                     >  SRR4302543.157919/1‑94 (MQ=60)

                                           ATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCC                                                    <  SRR4302543.1690148/94‑1 (MQ=60)

                                           ATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCC                                                    >  SRR4302543.342236/1‑94 (MQ=60)

                                           ATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCC                                                    >  SRR4302543.153174/1‑94 (MQ=60)

                                           ATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTACGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCC                                                    <  SRR4302543.1104116/94‑1 (MQ=60)

                                            TTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCG                                                   >  SRR4302543.7888427/1‑94 (MQ=60)

                                            TTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCG                                                   <  SRR4302543.4117582/94‑1 (MQ=60)

                                            TTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATAACAGATGCCCTCTTCCCG                                                   >  SRR4302543.7888426/1‑94 (MQ=60)

                                               CGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAG                                                <  SRR4302543.4945198/94‑1 (MQ=60)

                                               CGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAG                                                <  SRR4302543.3647604/94‑1 (MQ=60)

                                               CGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAG                                                <  SRR4302543.2895093/94‑1 (MQ=60)

                                                GATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGG                                               >  SRR4302543.4840566/1‑94 (MQ=60)

                                                 ATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGG                                              >  SRR4302543.2238376/1‑94 (MQ=60)

                                                  TTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGA                                             >  SRR4302543.7291608/1‑94 (MQ=60)

                                                   TCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAA                                            <  SRR4302543.5273685/94‑1 (MQ=60)

                                                   TCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAA                                            >  SRR4302543.3043468/1‑94 (MQ=60)

                                                   TCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAA                                            <  SRR4302543.3260326/94‑1 (MQ=60)

                                                   TCCATTTATGCACAAGCAAGAAAAGCCGCTGCCATTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAA                                            <  SRR4302543.5273684/94‑1 (MQ=60)

                                                   TCCAGTTATGCAGAAGACAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAA                                            <  SRR4302543.3346694/94‑1 (MQ=60)

                                                    CCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAG                                           <  SRR4302543.235740/94‑1 (MQ=60)

                                                    CCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAG                                           >  SRR4302543.6262417/1‑94 (MQ=60)

                                                     CATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGA                                          >  SRR4302543.1267694/1‑94 (MQ=60)

                                                     CATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGA                                          >  SRR4302543.3253857/1‑94 (MQ=60)

                                                     CATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGA                                          <  SRR4302543.880464/94‑1 (MQ=60)

                                                     CATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGA                                          <  SRR4302543.3833761/94‑1 (MQ=60)

                                                      ATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAG                                         >  SRR4302543.1908901/1‑94 (MQ=60)

                                                      ATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAG                                         >  SRR4302543.7557275/1‑94 (MQ=60)

                                                       TTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGG                                        <  SRR4302543.3132570/94‑1 (MQ=60)

                                                       TTTAGGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGG                                        <  SRR4302543.5771771/94‑1 (MQ=60)

                                                         TATGCACAAGGCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGT                                      <  SRR4302543.4244308/94‑1 (MQ=60)

                                                         TATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGT                                      <  SRR4302543.4557190/94‑1 (MQ=60)

                                                           TGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTA                                    <  SRR4302543.4065247/94‑1 (MQ=60)

                                                           TGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTA                                    <  SRR4302543.1763668/94‑1 (MQ=60)

                                                           TGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTA                                    <  SRR4302543.4535046/94‑1 (MQ=60)

                                                           TGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTA                                    <  SRR4302543.502248/94‑1 (MQ=60)

                                                           TCCACAAGCCAGAAAAGCCGCTGCCAGTGTGTGGTGTCGCATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTA                                    <  SRR4302543.4065243/94‑1 (MQ=60)

                                                            GCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAA                                   <  SRR4302543.3511615/94‑1 (MQ=60)

                                                            GCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAA                                   >  SRR4302543.500155/1‑94 (MQ=60)

                                                            GCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAA                                   >  SRR4302543.7988526/1‑94 (MQ=60)

                                                            GCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAA                                   <  SRR4302543.3463655/94‑1 (MQ=60)

                                                             CACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAA                                  <  SRR4302543.7208281/94‑1 (MQ=60)

                                                             CACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAA                                  <  SRR4302543.4346387/94‑1 (MQ=60)

                                                             CACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAA                                  >  SRR4302543.1897275/1‑94 (MQ=60)

                                                              cgAAGCCGGAAAAGCCGCTGCCAGTATGTGGTGTGCGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAAT                                 <  SRR4302543.1521656/92‑1 (MQ=60)

                                                              CCAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAAT                                 <  SRR4302543.1429811/94‑1 (MQ=60)

                                                              ACAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAAT                                 <  SRR4302543.3068292/94‑1 (MQ=60)

                                                               CAAGGCAGAAAAGCCCGTGCCAGTGTGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATA                                <  SRR4302543.6262153/94‑1 (MQ=60)

                                                               CAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATA                                >  SRR4302543.184574/1‑94 (MQ=60)

                                                               CAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATA                                >  SRR4302543.3673423/1‑94 (MQ=60)

                                                               CAAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATA                                <  SRR4302543.3044695/94‑1 (MQ=60)

                                                                AAGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAA                               <  SRR4302543.7074739/94‑1 (MQ=60)

                                                                 AGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAG                              <  SRR4302543.5809237/94‑1 (MQ=60)

                                                                 AGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAG                              <  SRR4302543.494579/94‑1 (MQ=60)

                                                                 AGCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAG                              >  SRR4302543.6240257/1‑94 (MQ=60)

                                                                  GCCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGG                             <  SRR4302543.4030504/94‑1 (MQ=60)

                                                                   CCAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGA                            <  SRR4302543.2200806/94‑1 (MQ=60)

                                                                    CAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAA                           <  SRR4302543.2818993/94‑1 (MQ=60)

                                                                    CAGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAA                           <  SRR4302543.6560869/94‑1 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          >  SRR4302543.1300284/1‑94 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          >  SRR4302543.1300283/1‑94 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          <  SRR4302543.3110768/94‑1 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          >  SRR4302543.3336205/1‑94 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          <  SRR4302543.2875224/94‑1 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          <  SRR4302543.3466104/94‑1 (MQ=60)

                                                                     AGAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAA                          >  SRR4302543.917669/1‑94 (MQ=60)

                                                                      GAAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAG                         >  SRR4302543.3290763/1‑94 (MQ=60)

                                                                       AAAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGA                        <  SRR4302543.2590173/94‑1 (MQ=60)

                                                                        AAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAA                       >  SRR4302543.554667/1‑94 (MQ=60)

                                                                        AAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAA                       >  SRR4302543.2375618/1‑94 (MQ=60)

                                                                        AAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAA                       <  SRR4302543.1629324/94‑1 (MQ=60)

                                                                        AAAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAA                       <  SRR4302543.6783833/94‑1 (MQ=60)

                                                                         AAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAG                      <  SRR4302543.5930089/94‑1 (MQ=60)

                                                                         AAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAG                      <  SRR4302543.2826612/94‑1 (MQ=60)

                                                                         AAGCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAG                      <  SRR4302543.3008833/94‑1 (MQ=60)

                                                                           GCCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGAT                    >  SRR4302543.2560997/1‑94 (MQ=60)

                                                                           ACCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGAT                    <  SRR4302543.2637287/94‑1 (MQ=60)

                                                                            CCGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATG                   <  SRR4302543.5116545/94‑1 (MQ=60)

                                                                             CGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGA                  >  SRR4302543.716833/1‑94 (MQ=60)

                                                                             CGCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGA                  >  SRR4302543.5501968/1‑94 (MQ=60)

                                                                             CGCTGCCAGTATGTGGGGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGCAGAGGGGTAAATAAGGAAAGAAGATGA                  >  SRR4302543.4482262/1‑94 (MQ=60)

                                                                              GCTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGAT                 <  SRR4302543.2209023/94‑1 (MQ=60)

                                                                               CTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATT                >  SRR4302543.1688612/1‑94 (MQ=60)

                                                                               CTGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATT                >  SRR4302543.2264072/1‑94 (MQ=60)

                                                                                TGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTG               <  SRR4302543.4209898/94‑1 (MQ=60)

                                                                                TGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTG               <  SRR4302543.1919673/94‑1 (MQ=60)

                                                                                TGCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTG               <  SRR4302543.3265030/94‑1 (MQ=60)

                                                                                 GCCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGA              >  SRR4302543.3402741/1‑94 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             >  SRR4302543.1500482/1‑94 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             <  SRR4302543.7822491/94‑1 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             >  SRR4302543.4496163/1‑94 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             <  SRR4302543.336228/94‑1 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             <  SRR4302543.7379787/94‑1 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             >  SRR4302543.2222836/1‑94 (MQ=60)

                                                                                  CCAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAA             >  SRR4302543.5745015/1‑94 (MQ=60)

                                                                                   CAGTATGTGGTGTCGGATGTATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGAAAGAGGGTTAAATAAGGAAAGAAGATGATTGAAC            <  SRR4302543.6262510/94‑1 (MQ=60)

                                                                                   CAGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAAC            >  SRR4302543.4298489/1‑94 (MQ=60)

                                                                                    AGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACA           >  SRR4302543.2715715/1‑94 (MQ=60)

                                                                                    AGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACA           >  SRR4302543.4352476/1‑94 (MQ=60)

                                                                                    AGTATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACA           >  SRR4302543.6383372/1‑94 (MQ=60)

                                                                                       ATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATT        >  SRR4302543.1592745/1‑94 (MQ=60)

                                                                                       ATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATT        <  SRR4302543.6803303/94‑1 (MQ=60)

                                                                                       ATGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATT        <  SRR4302543.2797878/94‑1 (MQ=60)

                                                                                        TGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTT       <  SRR4302543.3085912/94‑1 (MQ=60)

                                                                                        TGTGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTT       <  SRR4302543.7587951/94‑1 (MQ=60)

                                                                                          TGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTT     <  SRR4302543.5766036/94‑1 (MQ=60)

                                                                                          TGGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTT     <  SRR4302543.513576/94‑1 (MQ=60)

                                                                                           GGTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTC    <  SRR4302543.5645948/94‑1 (MQ=60)

                                                                                            GTGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCA   <  SRR4302543.1760076/94‑1 (MQ=60)

                                                                                             TGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  <  SRR4302543.1767837/94‑1 (MQ=60)

                                                                                             TGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  <  SRR4302543.5635380/94‑1 (MQ=60)

                                                                                             TGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  <  SRR4302543.3202152/94‑1 (MQ=60)

                                                                                             TGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGCAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  <  SRR4302543.2296891/94‑1 (MQ=60)

GTCAATGGTGTGATGGTCTATGAAGACCGTCAGTTTAACTTCGATTGCGATTCCATTTATGCACAAGCCAGAAAAGCCGCTGCCAGTATGTGGCGTCGGATGGATGCGCTGGCATAAATGACAGATGCCCTCTTCCCGCAGGGAAGAGGGTTAAATAAGGAAAGAAGATGATTGAACAATTTTTCAG  >  NC_000913/3018394‑3018580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`