Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,064,509 T→C M229V (ATG→GTG)  b2921 ← putative transcriptional regulator LYSR‑type

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,064,5090TC100.0% 1113.1 / NA 350M229V (ATG→GTG) b2921putative transcriptional regulator LYSR‑type
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (144/206);  total (144/206)

Only 100 of 358 total aligned reads displayed.

TTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTC  >  NC_000913/3064420‑3064597
                                                                                         |                                                                                        
tttCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACaaa                                                                                       >  2:2753766/1‑93 (MQ=255)
 ttCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACaaaa                                                                                      <  2:4947960/93‑1 (MQ=255)
 ttCAACGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACaaaa                                                                                      <  2:6095340/93‑1 (MQ=255)
  tCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAAc                                                                                     >  1:3783992/1‑93 (MQ=255)
   cAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACt                                                                                    <  1:6100109/93‑1 (MQ=255)
       gTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAg                                                                                <  1:2245197/93‑1 (MQ=255)
        ttGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAgg                                                                               <  2:4634431/93‑1 (MQ=255)
        ttGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAgg                                                                               >  1:7612932/1‑93 (MQ=255)
        ttGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAgg                                                                               >  1:5495609/1‑93 (MQ=255)
            cGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACg                                                                           <  2:7784264/93‑1 (MQ=255)
             ggATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGa                                                                          <  2:1023759/93‑1 (MQ=255)
              gATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGat                                                                         <  1:7909550/93‑1 (MQ=255)
              gATTCACCAGTCGCCAGGCAAAATGCGGGATAACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGAATTTGGCCACAAAACTGTAGGGACggt                                                                         >  1:1033125/1‑91 (MQ=255)
                ttCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataa                                                                       <  2:6540212/93‑1 (MQ=255)
                 tCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaa                                                                      >  1:1587650/1‑93 (MQ=255)
                    ccAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGataaataa                                                                   <  1:3504558/93‑1 (MQ=255)
                     cAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAaataat                                                                  <  2:3431174/93‑1 (MQ=255)
                       gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGGCGATAAATAATgg                                                                <  2:4450573/93‑1 (MQ=255)
                       gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATgg                                                                >  2:3126091/1‑93 (MQ=255)
                       gTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATgg                                                                >  1:5744978/1‑93 (MQ=255)
                        tCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGt                                                               >  2:1555868/1‑93 (MQ=255)
                         cGCCAGGCAAAATGCGGGATCACCGTTAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                              <  2:1710651/93‑1 (MQ=255)
                         cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                              <  2:1984565/93‑1 (MQ=255)
                         cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                              <  2:2044256/93‑1 (MQ=255)
                         cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                              <  2:2443403/93‑1 (MQ=255)
                         cGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGtt                                                              <  1:6345813/93‑1 (MQ=255)
                          gCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTg                                                             <  2:1055098/93‑1 (MQ=255)
                          gCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTg                                                             <  1:2150119/93‑1 (MQ=255)
                          gCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTg                                                             >  1:3638285/1‑93 (MQ=255)
                           ccAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTgg                                                            <  2:1821792/93‑1 (MQ=255)
                            cAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGa                                                           >  1:4900589/1‑93 (MQ=255)
                            cAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCGCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGa                                                           <  1:1454529/93‑1 (MQ=255)
                             aGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAt                                                          <  2:7655090/93‑1 (MQ=255)
                              ggCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAtt                                                         <  1:2884347/93‑1 (MQ=255)
                                cAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGa                                                       >  1:4386718/1‑93 (MQ=255)
                                cAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGa                                                       >  1:2857701/1‑93 (MQ=255)
                                cAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGa                                                       <  1:5168844/93‑1 (MQ=255)
                                 aaaaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGAt                                                      <  1:5097516/93‑1 (MQ=255)
                                  aaaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATc                                                     >  2:438772/1‑93 (MQ=255)
                                  aaaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATc                                                     >  2:7119423/1‑93 (MQ=255)
                                   aaTGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATcc                                                    <  1:4562944/93‑1 (MQ=255)
                                     tGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCca                                                  <  2:2916525/93‑1 (MQ=255)
                                         ggATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAg                                              >  1:909/1‑93 (MQ=255)
                                           aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAggc                                            >  2:2128674/1‑92 (MQ=255)
                                           aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGt                                            <  1:1228392/93‑1 (MQ=255)
                                           aTCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGt                                            <  2:6278401/93‑1 (MQ=255)
                                               ccGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCa                                        <  2:6951060/93‑1 (MQ=255)
                                                cGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCat                                       <  1:4730672/93‑1 (MQ=255)
                                                  tCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCatat                                     >  2:3358459/1‑93 (MQ=255)
                                                  tCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCatat                                     >  1:4861275/1‑93 (MQ=255)
                                                   cAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAtt                                    <  2:3045576/93‑1 (MQ=255)
                                                    aGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCGTATTc                                   <  1:3628493/93‑1 (MQ=255)
                                                    aGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTc                                   <  2:5452421/93‑1 (MQ=255)
                                                     gAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCg                                  >  2:2495338/1‑93 (MQ=255)
                                                     gAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCg                                  >  2:3314466/1‑93 (MQ=255)
                                                     gAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCg                                  >  1:1100147/1‑93 (MQ=255)
                                                       aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                <  1:3217639/93‑1 (MQ=255)
                                                       aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                <  2:2255630/93‑1 (MQ=255)
                                                       aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                <  2:5506211/93‑1 (MQ=255)
                                                       aaaTGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCa                                >  1:5602168/1‑93 (MQ=255)
                                                          tGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatca                             >  1:6698033/1‑93 (MQ=255)
                                                           gTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaa                            <  1:5002614/93‑1 (MQ=255)
                                                           gTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaa                            <  2:388303/93‑1 (MQ=255)
                                                            tCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaat                           >  2:5620900/1‑93 (MQ=255)
                                                            tCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaat                           <  1:7333060/93‑1 (MQ=255)
                                                            gccGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaat                           <  1:7735933/92‑1 (MQ=255)
                                                              cgcgCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCatcaatca                         <  1:704023/93‑1 (MQ=255)
                                                                cgcTCCACGGCGCTGATTTTGGCCACAAACCTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAtt                       <  1:422322/93‑1 (MQ=255)
                                                                cgcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAtt                       <  2:1225409/93‑1 (MQ=255)
                                                                cgcTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAtt                       >  2:7491299/1‑93 (MQ=255)
                                                                  cTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGc                     <  1:6547355/93‑1 (MQ=255)
                                                                  cTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGAGAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTgt                     >  1:1809241/1‑92 (MQ=255)
                                                                   tCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCt                    >  2:6435644/1‑93 (MQ=255)
                                                                   tCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCt                    >  2:516557/1‑93 (MQ=255)
                                                                   tCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCt                    >  1:5382664/1‑93 (MQ=255)
                                                                   cccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCt                    <  1:2400307/92‑1 (MQ=255)
                                                                    ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCtt                   <  1:4070365/93‑1 (MQ=255)
                                                                    ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCtt                   <  2:6424050/93‑1 (MQ=255)
                                                                    ccACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCtt                   <  2:4827499/93‑1 (MQ=255)
                                                                      aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                 >  1:6204669/1‑93 (MQ=255)
                                                                      aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                 >  2:1387454/1‑93 (MQ=255)
                                                                      aCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCg                 >  1:5035418/1‑93 (MQ=255)
                                                                         gcgcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAg              <  2:3945026/93‑1 (MQ=255)
                                                                          cgcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGt             <  1:4617019/93‑1 (MQ=255)
                                                                           gcTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGtt            >  2:232102/1‑93 (MQ=255)
                                                                            cTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTg           <  1:3022566/93‑1 (MQ=255)
                                                                            cTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTg           <  1:683516/93‑1 (MQ=255)
                                                                            cTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTg           <  1:7565063/93‑1 (MQ=255)
                                                                             tGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTggg          >  2:6711813/1‑93 (MQ=255)
                                                                             tGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTgg          >  2:3625276/1‑93 (MQ=255)
                                                                              gATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGc         >  2:5009489/1‑93 (MQ=255)
                                                                              gATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGc         <  2:6599055/93‑1 (MQ=255)
                                                                               aTTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGcc        >  1:2519129/1‑93 (MQ=255)
                                                                               aTTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGcc        >  2:4766468/1‑93 (MQ=255)
                                                                                ttttGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGccc       >  1:7860664/1‑93 (MQ=255)
                                                                                ttttGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGccc       <  1:6447161/93‑1 (MQ=255)
                                                                                  ttGGCCACAAAACTGTAGGGACGATAAATAATGGGTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTAGCCCgg     >  2:3762300/1‑93 (MQ=255)
                                                                                   tGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGt    >  1:5647182/1‑93 (MQ=255)
                                                                                     gCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTc  >  1:2623375/1‑93 (MQ=255)
                                                                                     gCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTc  <  1:3990761/93‑1 (MQ=255)
                                                                                         |                                                                                        
TTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTC  >  NC_000913/3064420‑3064597

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  >  NC_000913/3064417‑3064602
                                                                                            |                                                                                             
ATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACA                                                                                              >  SRR4302543.7291499/1‑94 (MQ=60)
  ATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAA                                                                                            >  SRR4302543.4942643/1‑94 (MQ=60)
    TTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAAC                                                                                          >  SRR4302543.3817324/1‑94 (MQ=60)
    TTCAGCGTGGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAAC                                                                                          <  SRR4302543.7672114/94‑1 (MQ=60)
     TCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACT                                                                                         <  SRR4302543.2509874/94‑1 (MQ=60)
      CAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTG                                                                                        <  SRR4302543.6157904/94‑1 (MQ=60)
      CAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTG                                                                                        <  SRR4302543.6978850/94‑1 (MQ=60)
       AGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGT                                                                                       >  SRR4302543.5149694/1‑94 (MQ=60)
         CGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAG                                                                                     <  SRR4302543.2295113/94‑1 (MQ=60)
          GTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGG                                                                                    <  SRR4302543.2265570/94‑1 (MQ=60)
          GTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGG                                                                                    >  SRR4302543.5315101/1‑94 (MQ=60)
          GTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGG                                                                                    >  SRR4302543.5545455/1‑94 (MQ=60)
          GTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGG                                                                                    >  SRR4302543.7685217/1‑94 (MQ=60)
          GTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCACAAAATGTACGCGCTCCACGGCGCTGATTTTGGCCACACAACTGTAGG                                                                                    >  SRR4302543.5714803/1‑94 (MQ=60)
           TTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGTAAATGTCCGCGCTCCACGGCGCTGATTTTCGCCACAAAACTGTAGGG                                                                                   >  SRR4302543.7947636/1‑94 (MQ=60)
            TGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGA                                                                                  <  SRR4302543.7835531/94‑1 (MQ=60)
            TGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGA                                                                                  >  SRR4302543.2753045/1‑94 (MQ=60)
            TGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGA                                                                                  >  SRR4302543.5189357/1‑94 (MQ=60)
              CCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACG                                                                                >  SRR4302543.6039565/1‑94 (MQ=60)
               CGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGA                                                                               >  SRR4302543.463368/1‑94 (MQ=60)
               CGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGA                                                                               >  SRR4302543.6385649/1‑94 (MQ=60)
               CGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGA                                                                               >  SRR4302543.93024/1‑94 (MQ=60)
                GGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGAT                                                                              <  SRR4302543.7123153/94‑1 (MQ=60)
                GGATTCACCAGTCGCCAGGCAAAATGCGGGATAACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGAATTTGGCCACAAAACTGTAGGGACGGT                                                                              >  SRR4302543.1042297/1‑94 (MQ=60)
                 GATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATA                                                                             <  SRR4302543.7983864/94‑1 (MQ=60)
                 GATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATA                                                                             >  SRR4302543.6692078/1‑94 (MQ=60)
                 GATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATA                                                                             <  SRR4302543.7983863/94‑1 (MQ=60)
                   TTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAA                                                                           >  SRR4302543.1601827/1‑94 (MQ=60)
                    TCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAAT                                                                          >  SRR4302543.370691/1‑94 (MQ=60)
                     CACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATA                                                                         >  SRR4302543.6985634/1‑94 (MQ=60)
                      CCCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAA                                                                        <  SRR4302543.1508080/94‑1 (MQ=60)
                       CCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAAT                                                                       >  SRR4302543.6205749/1‑94 (MQ=60)
                       CCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAAT                                                                       <  SRR4302543.3535892/94‑1 (MQ=60)
                       CCAGTCACCAAGCAAAATGCGGGATCGCCGTCAGAAAATGGCCGGGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAAT                                                                       <  SRR4302543.4397210/94‑1 (MQ=60)
                        CAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATG                                                                      <  SRR4302543.3665349/94‑1 (MQ=60)
                         AGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGG                                                                     <  SRR4302543.3590640/94‑1 (MQ=60)
                         AGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGG                                                                     >  SRR4302543.5797345/1‑94 (MQ=60)
                         AGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGG                                                                     >  SRR4302543.3155765/1‑94 (MQ=60)
                         AGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGG                                                                     <  SRR4302543.7711188/94‑1 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTTAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    >  SRR4302543.2888484/1‑94 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    >  SRR4302543.2556220/1‑94 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    >  SRR4302543.2556221/1‑94 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    <  SRR4302543.3376733/94‑1 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    <  SRR4302543.6175798/94‑1 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    <  SRR4302543.7629850/94‑1 (MQ=60)
                          GTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGT                                                                    >  SRR4302543.4587453/1‑94 (MQ=60)
                            CGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTG                                                                  <  SRR4302543.2217730/94‑1 (MQ=60)
                            CGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTG                                                                  >  SRR4302543.3670305/1‑94 (MQ=60)
                            CGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTG                                                                  <  SRR4302543.6405481/94‑1 (MQ=60)
                             GCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGG                                                                 >  SRR4302543.377326/1‑94 (MQ=60)
                             GCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGG                                                                 <  SRR4302543.2361609/94‑1 (MQ=60)
                             GCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGG                                                                 <  SRR4302543.2169376/94‑1 (MQ=60)
                             GCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGG                                                                 <  SRR4302543.2169377/94‑1 (MQ=60)
                              CCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGA                                                                >  SRR4302543.4945262/1‑94 (MQ=60)
                               CAGGCACAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               <  SRR4302543.2050249/94‑1 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCGCGGCGCTGATTTTGGCCACAAACCTGTAGGGACGATAAATAATGGTTGGAT                                                               <  SRR4302543.1074888/94‑1 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               >  SRR4302543.4579367/1‑94 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               >  SRR4302543.4878753/1‑94 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               <  SRR4302543.1043782/94‑1 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               <  SRR4302543.289034/94‑1 (MQ=60)
                               CAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCGCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGAT                                                               <  SRR4302543.1467660/94‑1 (MQ=60)
                                AGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATT                                                              >  SRR4302543.7652193/1‑94 (MQ=60)
                                AGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATT                                                              <  SRR4302543.646533/94‑1 (MQ=60)
                                 GGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTG                                                             <  SRR4302543.2910598/94‑1 (MQ=60)
                                 GGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTG                                                             <  SRR4302543.4664313/94‑1 (MQ=60)
                                 GGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTG                                                             <  SRR4302543.4045344/94‑1 (MQ=60)
                                  GCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGA                                                            >  SRR4302543.2883764/1‑94 (MQ=60)
                                  GCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGA                                                            >  SRR4302543.3538106/1‑94 (MQ=60)
                                  GCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGA                                                            >  SRR4302543.4426493/1‑94 (MQ=60)
                                   CAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGAT                                                           <  SRR4302543.3616322/94‑1 (MQ=60)
                                   CAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGAT                                                           <  SRR4302543.5215537/94‑1 (MQ=60)
                                    AAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATC                                                          <  SRR4302543.5143676/94‑1 (MQ=60)
                                    AAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATC                                                          >  SRR4302543.5052421/1‑94 (MQ=60)
                                    AAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATC                                                          >  SRR4302543.1329145/1‑94 (MQ=60)
                                    AAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATC                                                          >  SRR4302543.7644512/1‑94 (MQ=60)
                                    AAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGAGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATC                                                          >  SRR4302543.1368468/1‑94 (MQ=60)
                                      AATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCC                                                        <  SRR4302543.4604470/94‑1 (MQ=60)
                                      AATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCC                                                        <  SRR4302543.2261707/94‑1 (MQ=60)
                                      AATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCC                                                        >  SRR4302543.4456283/1‑94 (MQ=60)
                                         GCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACA                                                     >  SRR4302543.1883730/1‑94 (MQ=60)
                                           GGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAG                                                   >  SRR4302543.922/1‑94 (MQ=60)
                                           GGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAG                                                   <  SRR4302543.474606/94‑1 (MQ=60)
                                            GGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGG                                                  <  SRR4302543.4646260/94‑1 (MQ=60)
                                              ATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTC                                                >  SRR4302543.2957272/1‑94 (MQ=60)
                                              ATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTC                                                <  SRR4302543.1239434/94‑1 (MQ=60)
                                              ATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTC                                                <  SRR4302543.1205564/94‑1 (MQ=60)
                                               TCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCG                                               <  SRR4302543.530625/94‑1 (MQ=60)
                                               TCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCG                                               <  SRR4302543.509006/94‑1 (MQ=60)
                                                 ACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCA                                             <  SRR4302543.5234474/94‑1 (MQ=60)
                                                 ACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCA                                             >  SRR4302543.7870196/1‑94 (MQ=60)
                                                 ACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCA                                             >  SRR4302543.645938/1‑94 (MQ=60)
                                                 ACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCA                                             >  SRR4302543.4312976/1‑94 (MQ=60)
                                                   CGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATA                                           >  SRR4302543.3864683/1‑94 (MQ=60)
                                                   CGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATA                                           <  SRR4302543.4773885/94‑1 (MQ=60)
                                                   CGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATA                                           <  SRR4302543.4773886/94‑1 (MQ=60)
                                                   CGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATA                                           >  SRR4302543.5497878/1‑94 (MQ=60)
                                                    GTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAT                                          >  SRR4302543.4905600/1‑94 (MQ=60)
                                                    GTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAT                                          >  SRR4302543.5701926/1‑94 (MQ=60)
                                                    GTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAT                                          <  SRR4302543.5654327/94‑1 (MQ=60)
                                                    GTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAT                                          <  SRR4302543.3157914/94‑1 (MQ=60)
                                                    GTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATAT                                          <  SRR4302543.4058944/94‑1 (MQ=60)
                                                      CAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTC                                        <  SRR4302543.5517672/94‑1 (MQ=60)
                                                      CAGAAAATGTCCCGGCTCCCCGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAAAAATGGTTGGATTGATCCCAC‑AGGTCGCATATTCG                                       <  SRR4302543.874531/94‑1 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCGTATTCG                                       <  SRR4302543.3660447/94‑1 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCG                                       >  SRR4302543.1110055/1‑94 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCG                                       <  SRR4302543.6707880/94‑1 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCG                                       >  SRR4302543.7118391/1‑94 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCG                                       >  SRR4302543.3669791/1‑94 (MQ=60)
                                                       AGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCG                                       >  SRR4302543.5836973/1‑94 (MQ=60)
                                                        GAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGC                                      <  SRR4302543.4947216/94‑1 (MQ=60)
                                                         AAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCA                                     >  SRR4302543.5653214/1‑94 (MQ=60)
                                                         AAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGGAGGGTCGATAAATCATGGTTGGATTGATCGCACAACGTCGCcaattcgaa                                     >  SRR4302543.5653213/1‑85 (MQ=60)
                                                          AAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCAT                                    <  SRR4302543.3246710/94‑1 (MQ=60)
                                                          AAATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCAT                                    <  SRR4302543.4912491/94‑1 (MQ=60)
                                                            ATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCA                                  >  SRR4302543.2164449/1‑94 (MQ=60)
                                                            ATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCA                                  <  SRR4302543.65640/94‑1 (MQ=60)
                                                            ATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCA                                  >  SRR4302543.6761246/1‑94 (MQ=60)
                                                            ATGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCA                                  <  SRR4302543.6804790/94‑1 (MQ=60)
                                                             TGTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAA                                 <  SRR4302543.2744667/94‑1 (MQ=60)
                                                              GTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAAT                                <  SRR4302543.5048148/94‑1 (MQ=60)
                                                              GTCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAAT                                <  SRR4302543.7422313/94‑1 (MQ=60)
                                                               TCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATC                               <  SRR4302543.7403626/94‑1 (MQ=60)
                                                               GCCGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATC                               <  SRR4302543.7809027/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCGCAAGGTCGCATATTCGCATCAATCAT                             <  SRR4302543.3959889/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAT                             <  SRR4302543.5463768/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAT                             <  SRR4302543.5070345/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAT                             <  SRR4302543.710441/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAT                             <  SRR4302543.7125505/94‑1 (MQ=60)
                                                                 CGCGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCAT                             >  SRR4302543.7953895/1‑94 (MQ=60)
                                                                  GCGTTCCACGGCGCTGATTTTGGCCACAAAATTGTAGGGACGTTAAATAATGGTAGGAGTGTTCCCACAAGGTTGTATATCCGCTTCAATCTTT                            >  SRR4302543.7107043/1‑94 (MQ=32)
                                                                   CGCTCCACGGCGCTGATTTTTGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTG                           <  SRR4302543.2511757/94‑1 (MQ=60)
                                                                   CGCTCCACGGCGCTGATTTTGGCCACAAACCTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTG                           <  SRR4302543.426272/94‑1 (MQ=60)
                                                                   CGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTG                           <  SRR4302543.2511758/94‑1 (MQ=60)
                                                                   CGCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTG                           <  SRR4302543.426270/94‑1 (MQ=60)
                                                                    GCTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGAGAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGT                          >  SRR4302543.1825445/1‑94 (MQ=60)
                                                                     CTCCACGGCGCTGATTTTGGCTACAATACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCT                         <  SRR4302543.6164528/94‑1 (MQ=60)
                                                                     CTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCT                         <  SRR4302543.6608980/94‑1 (MQ=60)
                                                                     CTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCT                         <  SRR4302543.5090453/94‑1 (MQ=60)
                                                                     CTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCT                         <  SRR4302543.569894/94‑1 (MQ=60)
                                                                     CTCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCT                         >  SRR4302543.5431524/1‑94 (MQ=60)
                                                                      TCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTT                        <  SRR4302543.1575436/94‑1 (MQ=60)
                                                                      TCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTT                        <  SRR4302543.4838140/94‑1 (MQ=60)
                                                                      TCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTT                        <  SRR4302543.6319617/94‑1 (MQ=60)
                                                                      TCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTT                        <  SRR4302543.5020263/94‑1 (MQ=60)
                                                                      CCCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTT                        <  SRR4302543.2422013/94‑1 (MQ=60)
                                                                       CCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTC                       <  SRR4302543.4871947/94‑1 (MQ=60)
                                                                       CCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTC                       <  SRR4302543.5136304/94‑1 (MQ=60)
                                                                       CCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTC                       <  SRR4302543.4106828/94‑1 (MQ=60)
                                                                       CCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTC                       <  SRR4302543.1231858/94‑1 (MQ=60)
                                                                       CCACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCCCATCAATCATTGCTTC                       <  SRR4302543.7794870/94‑1 (MQ=60)
                                                                        CACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCG                      >  SRR4302543.6263260/1‑94 (MQ=60)
                                                                        CACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCG                      >  SRR4302543.5081222/1‑94 (MQ=60)
                                                                        CACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCG                      <  SRR4302543.6637239/94‑1 (MQ=60)
                                                                        CACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCG                      >  SRR4302543.7854638/1‑94 (MQ=60)
                                                                        CACGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCG                      >  SRR4302543.3260588/1‑94 (MQ=60)
                                                                          CGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAA                    <  SRR4302543.3007105/94‑1 (MQ=60)
                                                                          CGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAA                    <  SRR4302543.4234046/94‑1 (MQ=60)
                                                                          CGGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAA                    <  SRR4302543.3007106/94‑1 (MQ=60)
                                                                           GGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAG                   <  SRR4302543.3810351/94‑1 (MQ=60)
                                                                           GGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAG                   <  SRR4302543.6555505/94‑1 (MQ=60)
                                                                           GGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAG                   <  SRR4302543.4948098/94‑1 (MQ=60)
                                                                           GGCGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAG                   <  SRR4302543.419876/94‑1 (MQ=60)
                                                                             CGCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTT                 <  SRR4302543.4658970/94‑1 (MQ=60)
                                                                              GCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTG                >  SRR4302543.1506385/1‑94 (MQ=60)
                                                                              GCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTG                <  SRR4302543.566289/94‑1 (MQ=60)
                                                                              GCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTG                <  SRR4302543.6831322/94‑1 (MQ=60)
                                                                              GCTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTG                >  SRR4302543.6051296/1‑94 (MQ=60)
                                                                               CTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGG               >  SRR4302543.980657/1‑94 (MQ=60)
                                                                               CTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGG               >  SRR4302543.980655/1‑94 (MQ=60)
                                                                               CTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGG               <  SRR4302543.7637058/94‑1 (MQ=60)
                                                                               CTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGG               <  SRR4302543.689821/94‑1 (MQ=60)
                                                                               CTGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGG               <  SRR4302543.3049890/94‑1 (MQ=60)
                                                                                TGATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGC              <  SRR4302543.306305/94‑1 (MQ=60)
                                                                                 GATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCC             >  SRR4302543.2542018/1‑94 (MQ=60)
                                                                                 GATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCC             <  SRR4302543.1656035/94‑1 (MQ=60)
                                                                                  ATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCC            >  SRR4302543.7934702/1‑94 (MQ=60)
                                                                                  ATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCC            <  SRR4302543.2835306/94‑1 (MQ=60)
                                                                                  ATTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCC            <  SRR4302543.6472351/94‑1 (MQ=60)
                                                                                   TTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCG           <  SRR4302543.6507903/94‑1 (MQ=60)
                                                                                   TTTTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCG           <  SRR4302543.1227760/94‑1 (MQ=60)
                                                                                     TTGGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGT         >  SRR4302543.5698665/1‑94 (MQ=60)
                                                                                       GGCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTC       >  SRR4302543.2647131/1‑94 (MQ=60)
                                                                                        GCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT      <  SRR4302543.1685962/94‑1 (MQ=60)
                                                                                        GCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT      <  SRR4302543.814846/94‑1 (MQ=60)
                                                                                        GCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT      <  SRR4302543.4026251/94‑1 (MQ=60)
                                                                                        GCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT      <  SRR4302543.5619310/94‑1 (MQ=60)
                                                                                        GCCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCT      <  SRR4302543.3912422/94‑1 (MQ=60)
                                                                                         CCACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTG     >  SRR4302543.4205607/1‑94 (MQ=60)
                                                                                         CCACAAAACTGTAGCGACGATAAATAATGGTTAGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTG     >  SRR4302543.5762949/1‑94 (MQ=60)
                                                                                           ACAAAACTGTAGGGACGATAAATGATGGGTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCCTTGCTTCGCAGTTTGACCGGTTCTGAA   >  SRR4302543.5384649/1‑94 (MQ=60)
                                                                                           ACAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAA   <  SRR4302543.4175892/94‑1 (MQ=60)
                                                                                            CAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  >  SRR4302543.3862331/1‑94 (MQ=60)
                                                                                            CAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  <  SRR4302543.6104518/94‑1 (MQ=60)
                                                                                            CAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  >  SRR4302543.7754245/1‑94 (MQ=60)
                                                                                            CAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  <  SRR4302543.1843460/94‑1 (MQ=60)
                                                                                            |                                                                                             
ATATTTCAGCGTTGCCGGATTCACCAGTCGCCAGGCAAAATGCGGGATCACCGTCAGAAAATGTCCGCGCTCCACGGCGCTGATTTTGGCCATAAAACTGTAGGGACGATAAATAATGGTTGGATTGATCCCACAAGGTCGCATATTCGCATCAATCATTGCTTCGAAGTTGGCCCGGTTCTGAAA  >  NC_000913/3064417‑3064602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑