Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 1696 279.3 15874187 97.8% 15524954 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,077,905 A→G S584P (TCG→CCG)  tktA ← transketolase 1 isozyme

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,077,9050AG100.0% 948.9 / NA 300S584P (TCG→CCG) tktAtransketolase 1 isozyme
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (141/159);  total (141/159)

Only 100 of 317 total aligned reads displayed.

CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA  >  NC_000913/3077815‑3077994
                                                                                          |                                                                                         
ccGCTTCTACAGCAACGCGTGCAGTAATCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  1:3716829/93‑1 (MQ=255)
ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         >  2:1698423/1‑93 (MQ=255)
ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  2:3419292/93‑1 (MQ=255)
ccGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCa                                                                                         <  2:3874655/93‑1 (MQ=255)
 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        >  1:1910523/1‑93 (MQ=255)
 cGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAt                                                                                        >  2:7493020/1‑93 (MQ=255)
   cTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATgg                                                                                      <  1:1564009/93‑1 (MQ=255)
    ttCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGa                                                                                     <  2:1146748/93‑1 (MQ=255)
    ttCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGa                                                                                     >  2:5808303/1‑93 (MQ=255)
      cTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGaca                                                                                   >  2:7588430/1‑93 (MQ=255)
        aCAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAcacc                                                                                 >  1:1804756/1‑93 (MQ=255)
             aaCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcg                                                                            <  2:5975358/93‑1 (MQ=255)
              aCGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgc                                                                           >  1:4548887/1‑93 (MQ=255)
               cgcgTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAcgcgcg                                                                          >  2:6344736/1‑93 (MQ=255)
                gcgTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACgcgcgc                                                                         <  2:2425560/93‑1 (MQ=255)
                  gTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCtt                                                                       >  1:7382970/1‑93 (MQ=255)
                   tGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt                                                                      <  2:133241/93‑1 (MQ=255)
                   tGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCttt                                                                      <  1:134553/93‑1 (MQ=255)
                     cAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCa                                                                    <  2:212370/93‑1 (MQ=255)
                     cAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCa                                                                    <  1:389466/93‑1 (MQ=255)
                     cAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCa                                                                    <  1:7598621/93‑1 (MQ=255)
                      aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAc                                                                   <  1:5851112/93‑1 (MQ=255)
                      aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAc                                                                   <  1:3546652/93‑1 (MQ=255)
                      aGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAc                                                                   <  2:5870035/93‑1 (MQ=255)
                       gTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACg                                                                  >  1:1909256/1‑93 (MQ=255)
                       gTAACCGCTTTCGGCAGTACGGACTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCCTTCACg                                                                  >  1:2674199/1‑93 (MQ=255)
                        tAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGc                                                                 <  1:4995342/93‑1 (MQ=255)
                          aCCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCt                                                               >  1:232359/1‑93 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              <  2:1875048/93‑1 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              <  1:3090629/93‑1 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              >  2:412981/1‑93 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              <  1:2980350/93‑1 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              <  2:5299194/93‑1 (MQ=255)
                           ccGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCtt                                                              <  1:6919204/93‑1 (MQ=255)
                             gCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCg                                                            >  1:4695682/1‑93 (MQ=255)
                              cTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCgg                                                           <  2:1572001/93‑1 (MQ=255)
                              cTTTCGGCAGTACGGATTCACGGTAAGCAGCAGCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCgg                                                           <  1:6698027/93‑1 (MQ=255)
                                 tCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcag                                                        <  2:4541935/93‑1 (MQ=255)
                                 tCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcag                                                        <  2:294625/93‑1 (MQ=255)
                                 tCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcag                                                        >  2:5501682/1‑93 (MQ=255)
                                  cGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCCAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagc                                                       >  2:219506/1‑92 (MQ=255)
                                  cGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagt                                                       <  1:1164892/93‑1 (MQ=255)
                                   ggCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGcagtc                                                      >  2:3600078/1‑93 (MQ=255)
                                       gTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtt                                                  >  2:3268683/1‑93 (MQ=255)
                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttt                                                 >  1:3252877/1‑93 (MQ=255)
                                        tACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttt                                                 >  1:2127844/1‑93 (MQ=255)
                                         aCGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGtttt                                                <  2:7300328/93‑1 (MQ=255)
                                          cgtaTTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt                                               <  2:5967895/90‑1 (MQ=255)
                                          cGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt                                               >  2:2591275/1‑93 (MQ=255)
                                          cGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGttttt                                               <  1:7895364/93‑1 (MQ=255)
                                            gATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCg                                             >  1:681699/1‑93 (MQ=255)
                                             aTTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGt                                            <  2:3530200/93‑1 (MQ=255)
                                              ttCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTa                                           >  2:5241779/1‑93 (MQ=255)
                                               tCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAg                                          <  1:7596155/93‑1 (MQ=255)
                                               tCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAg                                          >  1:2797847/1‑93 (MQ=255)
                                               tCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAg                                          >  2:608365/1‑93 (MQ=255)
                                                cACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAgg                                         <  1:3662614/93‑1 (MQ=255)
                                                    gTAAGCGGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagc                                     <  1:624111/93‑1 (MQ=255)
                                                    gTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagc                                     <  1:3186688/93‑1 (MQ=255)
                                                     tAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagca                                    <  1:2248082/93‑1 (MQ=255)
                                                      aaGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGgcagcca                                   >  2:1438616/1‑91 (MQ=255)
                                                      aaGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCaa                                   <  1:5693284/93‑1 (MQ=255)
                                                      aaGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCaa                                   >  2:1068999/1‑93 (MQ=255)
                                                       agcagcATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAc                                  <  1:7553255/93‑1 (MQ=255)
                                                        gcagcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACa                                 >  1:7411735/1‑93 (MQ=255)
                                                          agcaTCCTGCTTGTCAAATGCGTCGGTAGACCGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGc                               >  2:5019542/1‑93 (MQ=255)
                                                           gcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGcc                              >  1:4233756/1‑93 (MQ=255)
                                                           gcaTCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGcc                              <  1:1452944/93‑1 (MQ=255)
                                                              tCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGt                           >  1:3959725/1‑93 (MQ=255)
                                                              tCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGt                           >  2:7140752/1‑93 (MQ=255)
                                                               ccTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGtt                          <  2:87100/93‑1 (MQ=255)
                                                                cTGCTTGTCAAATGCGTCGGTAGACGGCATGGACCCCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTc                         <  1:5052368/93‑1 (MQ=255)
                                                                cTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTc                         >  2:6753891/1‑93 (MQ=255)
                                                                 tGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCa                        >  2:4206807/1‑93 (MQ=255)
                                                                 tGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCa                        <  2:4591558/93‑1 (MQ=255)
                                                                  gCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCaa                       <  1:6034266/93‑1 (MQ=255)
                                                                  gCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCaa                       <  1:703745/93‑1 (MQ=255)
                                                                   cTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAc                      >  1:7222437/1‑93 (MQ=255)
                                                                    ttGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACt                     <  1:7325658/93‑1 (MQ=255)
                                                                     tGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACtt                    >  1:6101733/1‑93 (MQ=255)
                                                                      gTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTc                   <  1:6558269/93‑1 (MQ=255)
                                                                         aaaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGa                <  2:5360063/93‑1 (MQ=255)
                                                                          aaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGaa               >  2:6206667/1‑93 (MQ=255)
                                                                          aaTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGaa               <  1:108494/93‑1 (MQ=255)
                                                                           aTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAc              <  1:772029/93‑1 (MQ=255)
                                                                           aTGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAc              <  2:6434090/93‑1 (MQ=255)
                                                                            tGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAcc             <  1:2407659/93‑1 (MQ=255)
                                                                            tGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAcc             >  2:1825644/1‑93 (MQ=255)
                                                                            tGCGCCGGTAGACGGCAGGAACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAcc             <  2:230248/93‑1 (MQ=255)
                                                                               gTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGt          >  2:6641794/1‑93 (MQ=255)
                                                                                tCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTa         >  1:557139/1‑93 (MQ=255)
                                                                                tCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTa         >  1:247120/1‑93 (MQ=255)
                                                                                gcGGTAGACGGGATGGACACCACGCGCGCTTTCACGCCGTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTa         <  1:1012967/92‑1 (MQ=255)
                                                                                  gggaGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTGTCTCGTAGGCAGCAACAGCCAGTTCAACTTCCGAACCGGTAGc       >  2:7042875/4‑93 (MQ=255)
                                                                                    tAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGa     >  2:3112249/1‑93 (MQ=255)
                                                                                    tAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGa     <  2:7865368/93‑1 (MQ=255)
                                                                                      gacggcATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCCGTTCAACTTCTGAACCGGTAGCGATg   >  1:2834298/1‑93 (MQ=255)
                                                                                      gacggcATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATg   >  1:3344443/1‑93 (MQ=255)
                                                                                      gacggcATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATg   <  1:7118139/93‑1 (MQ=255)
                                                                                      gacggcATGGACACCACGCGCGCTATCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATg   <  2:5534128/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA  >  NC_000913/3077815‑3077994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  >  NC_000913/3077812‑3077998
                                                                                             |                                                                                             
TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGG                                                                                               >  SRR4302543.6250762/1‑94 (MQ=60)
 ACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGC                                                                                              >  SRR4302543.7618298/1‑94 (MQ=60)
  CCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCA                                                                                             <  SRR4302543.2892022/94‑1 (MQ=60)
  CCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCA                                                                                             >  SRR4302543.4068789/1‑94 (MQ=60)
  CCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCA                                                                                             >  SRR4302543.3656812/1‑94 (MQ=60)
   CCGCTTCTACAGCAACGCGTGCAGTAATCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302543.3749513/94‑1 (MQ=60)
   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302543.7130585/94‑1 (MQ=60)
   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            >  SRR4302543.1927742/1‑94 (MQ=60)
   CCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCAT                                                                                            <  SRR4302543.4457097/94‑1 (MQ=60)
    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCATGATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           >  SRR4302543.3747138/1‑94 (MQ=60)
    CGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATG                                                                                           >  SRR4302543.2418259/1‑94 (MQ=60)
     GCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGG                                                                                          <  SRR4302543.2987625/94‑1 (MQ=60)
      CTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGA                                                                                         <  SRR4302543.1577984/94‑1 (MQ=60)
       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        <  SRR4302543.1077484/94‑1 (MQ=60)
       TTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGAC                                                                                        >  SRR4302543.424731/1‑94 (MQ=60)
        TCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACA                                                                                       >  SRR4302543.6165666/1‑94 (MQ=60)
         CTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAC                                                                                      >  SRR4302543.5064090/1‑94 (MQ=60)
         CTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACAC                                                                                      >  SRR4302543.5064091/1‑94 (MQ=60)
          TACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACC                                                                                     >  SRR4302543.318686/1‑94 (MQ=60)
          TACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACC                                                                                     >  SRR4302543.1439346/1‑94 (MQ=60)
          TACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACC                                                                                     >  SRR4302543.1820908/1‑94 (MQ=60)
           ACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCA                                                                                    >  SRR4302543.1094558/1‑94 (MQ=60)
            CAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAC                                                                                   <  SRR4302543.4478453/94‑1 (MQ=60)
            CAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCAC                                                                                   <  SRR4302543.7252037/94‑1 (MQ=60)
             AGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACG                                                                                  <  SRR4302543.2165604/94‑1 (MQ=60)
               CAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCG                                                                                <  SRR4302543.3803304/94‑1 (MQ=60)
                AACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTACGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGCCACCACGCGC                                                                               >  SRR4302543.5683107/1‑94 (MQ=60)
                AACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGC                                                                               >  SRR4302543.4590315/1‑94 (MQ=60)
                AACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGC                                                                               >  SRR4302543.2265799/1‑94 (MQ=60)
                 ACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCG                                                                              <  SRR4302543.367222/94‑1 (MQ=60)
                   GCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCT                                                                            <  SRR4302543.1175075/94‑1 (MQ=60)
                    CGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTT                                                                           >  SRR4302543.7453925/1‑94 (MQ=60)
                      TGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTC                                                                         <  SRR4302543.135745/94‑1 (MQ=60)
                      TGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTC                                                                         >  SRR4302543.5936683/1‑94 (MQ=60)
                       GCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCA                                                                        <  SRR4302543.1725838/94‑1 (MQ=60)
                       GCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCA                                                                        <  SRR4302543.155513/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCCCGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.7670784/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.3198130/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.2572093/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.393064/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       >  SRR4302543.1442064/1‑94 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.7895421/94‑1 (MQ=60)
                        CAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCAC                                                                       <  SRR4302543.7670786/94‑1 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      <  SRR4302543.5904353/94‑1 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      >  SRR4302543.1926460/1‑94 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      >  SRR4302543.2788768/1‑94 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      <  SRR4302543.3578138/94‑1 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACG                                                                      >  SRR4302543.4931671/1‑94 (MQ=60)
                         AGTAACCGCTTTCGGCAGTACGGACTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCCTTCACG                                                                      >  SRR4302543.2698443/1‑94 (MQ=60)
                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302543.7444983/1‑94 (MQ=60)
                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302543.325274/1‑94 (MQ=60)
                          GTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGC                                                                     >  SRR4302543.6099661/1‑94 (MQ=60)
                           TAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCC                                                                    <  SRR4302543.5040812/94‑1 (MQ=60)
                            AACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCT                                                                   >  SRR4302543.234366/1‑94 (MQ=60)
                            AACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCT                                                                   >  SRR4302543.7080866/1‑94 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.3007416/94‑1 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.3292575/94‑1 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.6984260/94‑1 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.3118423/94‑1 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.2307578/94‑1 (MQ=60)
                              CCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTCGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTC                                                                 <  SRR4302543.3118419/94‑1 (MQ=60)
                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                >  SRR4302543.4738562/1‑94 (MQ=60)
                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                <  SRR4302543.4828143/94‑1 (MQ=60)
                               CGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCG                                                                >  SRR4302543.3274807/1‑94 (MQ=60)
                                GCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGG                                                               >  SRR4302543.6973727/1‑94 (MQ=60)
                                 CTTTCGGCAGTACGGATTCACGGTAAGCAGCAGCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGC                                                              <  SRR4302543.6761240/94‑1 (MQ=60)
                                  TTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCA                                                             <  SRR4302543.6318352/94‑1 (MQ=60)
                                   TTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAG                                                            >  SRR4302543.2395689/1‑94 (MQ=60)
                                    TCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGT                                                           <  SRR4302543.6308576/94‑1 (MQ=60)
                                     CGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTC                                                          <  SRR4302543.1175488/94‑1 (MQ=60)
                                      GGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCA                                                         >  SRR4302543.3984382/1‑94 (MQ=60)
                                       GCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAG                                                        <  SRR4302543.7419281/94‑1 (MQ=60)
                                       GCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAG                                                        <  SRR4302543.6925534/94‑1 (MQ=60)
                                        CAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGT                                                       >  SRR4302543.5489677/1‑94 (MQ=60)
                                         AGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTT                                                      <  SRR4302543.5512066/94‑1 (MQ=60)
                                         AGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTT                                                      >  SRR4302543.2017896/1‑94 (MQ=60)
                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302543.3282286/1‑94 (MQ=60)
                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302543.7596886/1‑94 (MQ=60)
                                          GTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTT                                                     >  SRR4302543.2146894/1‑94 (MQ=60)
                                           TACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTT                                                    >  SRR4302543.1000691/1‑94 (MQ=60)
                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  >  SRR4302543.3550838/1‑94 (MQ=60)
                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  <  SRR4302543.7730955/94‑1 (MQ=60)
                                             CGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTC                                                  <  SRR4302543.7969604/94‑1 (MQ=60)
                                              GGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCG                                                 >  SRR4302543.687995/1‑94 (MQ=60)
                                                ATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTA                                               >  SRR4302543.2748034/1‑94 (MQ=60)
                                                ATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTA                                               >  SRR4302543.37354/1‑94 (MQ=60)
                                                 TTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAG                                              >  SRR4302543.2823422/1‑94 (MQ=60)
                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302543.1927022/94‑1 (MQ=60)
                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302543.2015485/94‑1 (MQ=60)
                                                  TCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302543.7668315/94‑1 (MQ=60)
                                                  TCACGGTAAGCAGCATCCTGCGTGGCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGG                                             <  SRR4302543.1927023/94‑1 (MQ=60)
                                                   CACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGGGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGC                                            >  SRR4302543.2545378/1‑94 (MQ=60)
                                                   CACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGC                                            <  SRR4302543.3694779/94‑1 (MQ=60)
                                                   CACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGC                                            <  SRR4302543.1126082/94‑1 (MQ=60)
                                                    ACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCA                                           <  SRR4302543.6881164/94‑1 (MQ=60)
                                                    ACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCA                                           <  SRR4302543.6881163/94‑1 (MQ=60)
                                                     CGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAG                                          >  SRR4302543.2321221/1‑94 (MQ=60)
                                                       GTAAGCGGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        <  SRR4302543.629825/94‑1 (MQ=60)
                                                       GTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        >  SRR4302543.6640775/1‑94 (MQ=60)
                                                       GTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCA                                        <  SRR4302543.3215425/94‑1 (MQ=60)
                                                        TAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAA                                       >  SRR4302543.7669092/1‑94 (MQ=60)
                                                        TAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAA                                       <  SRR4302543.2268497/94‑1 (MQ=60)
                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      <  SRR4302543.5745232/94‑1 (MQ=60)
                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      <  SRR4302543.6139796/94‑1 (MQ=60)
                                                         AAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAAC                                      >  SRR4302543.7649096/1‑94 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     >  SRR4302543.7482849/1‑94 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     <  SRR4302543.7625187/94‑1 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     >  SRR4302543.1819659/1‑94 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     <  SRR4302543.7625186/94‑1 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGAATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     <  SRR4302543.7480731/94‑1 (MQ=60)
                                                          AGCAGCATCCTGCTTGTCAAATGCCTCGGTAGACGGCATGGCCACCACGCGCGCTTTCCCGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACA                                     <  SRR4302543.1535808/94‑1 (MQ=60)
                                                           GCAGCATCCTGCTTGTCAAATGCNTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAG                                    <  SRR4302543.3983701/94‑1 (MQ=60)
                                                           GCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAG                                    <  SRR4302543.3702296/94‑1 (MQ=60)
                                                           GCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAG                                    <  SRR4302543.625013/94‑1 (MQ=60)
                                                            CAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGC                                   <  SRR4302543.1745657/94‑1 (MQ=60)
                                                            CAGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGC                                   <  SRR4302543.3560337/94‑1 (MQ=60)
                                                             AGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCC                                  >  SRR4302543.4272161/1‑94 (MQ=60)
                                                             AGCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCC                                  >  SRR4302543.2842113/1‑94 (MQ=60)
                                                             AGCATCCTGCTTGTCAAATGCGTCGGCAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAAGCAGCAACAACC                                  >  SRR4302543.3099973/1‑94 (MQ=60)
                                                              GCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCA                                 <  SRR4302543.1466061/94‑1 (MQ=60)
                                                              GCATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGATTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCA                                 >  SRR4302543.1868044/1‑94 (MQ=60)
                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               >  SRR4302543.3994786/1‑94 (MQ=60)
                                                                ATCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGT                               <  SRR4302543.66962/94‑1 (MQ=60)
                                                                 TCCTGCTTGTCAAATGCGTCGGTAGACGGCATGGCCACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTT                              <  SRR4302543.4403844/94‑1 (MQ=60)
                                                                  CCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTC                             >  SRR4302543.4721721/1‑94 (MQ=60)
                                                                  CCTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTC                             >  SRR4302543.284035/1‑94 (MQ=60)
                                                                   CTGCTTGTCAAATGCGTCGGTAGACGGCATGGACCCCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCA                            <  SRR4302543.5098304/94‑1 (MQ=60)
                                                                   CTGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCA                            >  SRR4302543.7754206/1‑94 (MQ=60)
                                                                    TGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAA                           >  SRR4302543.7386811/1‑94 (MQ=60)
                                                                    TGCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAA                           <  SRR4302543.7134193/94‑1 (MQ=60)
                                                                     GCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAC                          <  SRR4302543.710159/94‑1 (MQ=60)
                                                                     GCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAC                          >  SRR4302543.7292430/1‑94 (MQ=60)
                                                                     GCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAC                          <  SRR4302543.6090964/94‑1 (MQ=60)
                                                                     GCTTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAAC                          >  SRR4302543.6052048/1‑94 (MQ=60)
                                                                       TTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTT                        >  SRR4302543.6159543/1‑94 (MQ=60)
                                                                       TTGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTT                        <  SRR4302543.7396190/94‑1 (MQ=60)
                                                                        TGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTC                       >  SRR4302543.5833096/1‑94 (MQ=60)
                                                                        TGTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTC                       >  SRR4302543.7233866/1‑94 (MQ=60)
                                                                         GTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      <  SRR4302543.6619977/94‑1 (MQ=60)
                                                                         GTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      >  SRR4302543.133784/1‑94 (MQ=60)
                                                                         GTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      >  SRR4302543.246004/1‑94 (MQ=60)
                                                                         GTCAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCT                      <  SRR4302543.7364048/94‑1 (MQ=60)
                                                                         GTCAAATGCGTCGGTAGACCGAATGGACACCACGCGCGCTTTCACGCCTCGGGCAGTCAGTTTTTAGTAGGacgcaaccgccagtccactttct                      >  SRR4302543.246003/1‑71 (MQ=46)
                                                                           CAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGA                    <  SRR4302543.7493970/94‑1 (MQ=60)
                                                                           CAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGA                    <  SRR4302543.974504/94‑1 (MQ=60)
                                                                           CAAATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGA                    <  SRR4302543.7493971/94‑1 (MQ=60)
                                                                           CAAATGCGTCGGTAGACAGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGA                    <  SRR4302543.7082249/94‑1 (MQ=60)
                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  <  SRR4302543.109484/94‑1 (MQ=60)
                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  <  SRR4302543.58850/94‑1 (MQ=60)
                                                                             AATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAAC                  <  SRR4302543.5027608/94‑1 (MQ=60)
                                                                              ATGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACC                 <  SRR4302543.778802/94‑1 (MQ=60)
                                                                               TGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCG                <  SRR4302543.2429420/94‑1 (MQ=60)
                                                                               TGCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCG                <  SRR4302543.3812550/94‑1 (MQ=60)
                                                                                GCGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGG               >  SRR4302543.2423639/1‑94 (MQ=60)
                                                                                 CGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              >  SRR4302543.3347937/1‑94 (MQ=60)
                                                                                 CGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              <  SRR4302543.1276683/94‑1 (MQ=60)
                                                                                 CGTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGT              >  SRR4302543.6999554/1‑94 (MQ=60)
                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCTTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             <  SRR4302543.3097728/94‑1 (MQ=60)
                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302543.562249/1‑94 (MQ=60)
                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             <  SRR4302543.7833205/94‑1 (MQ=60)
                                                                                  GTCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTA             >  SRR4302543.249263/1‑94 (MQ=60)
                                                                                   TCGGTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAG            <  SRR4302543.6142227/94‑1 (MQ=60)
                                                                                   GCGGTAGACGGGATGGACACCACGCGCGCTTTCACGCCGTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAG            <  SRR4302543.1021930/94‑1 (MQ=60)
                                                                                      GTAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGgagagt         >  SRR4302543.192174/1‑88 (MQ=60)
                                                                                       TAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGAT        <  SRR4302543.5695544/94‑1 (MQ=60)
                                                                                       TAGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGAT        >  SRR4302543.7461293/1‑94 (MQ=60)
                                                                                        AGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCCGTTCAACTTCTGAACCGGTAGCGATG       >  SRR4302543.2860220/1‑94 (MQ=60)
                                                                                        AGACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATG       >  SRR4302543.3374557/1‑94 (MQ=60)
                                                                                         GACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA      >  SRR4302543.2983328/1‑94 (MQ=60)
                                                                                         GACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA      <  SRR4302543.4630235/94‑1 (MQ=60)
                                                                                         GACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGA      <  SRR4302543.7187288/94‑1 (MQ=60)
                                                                                          ACGGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAA     >  SRR4302543.7733222/1‑94 (MQ=60)
                                                                                            GGCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAA   >  SRR4302543.7114343/1‑94 (MQ=60)
                                                                                             GCATGGACACCACGCGCGCTTTCACTCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  <  SRR4302543.929889/94‑1 (MQ=60)
                                                                                             GCATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGGTCAACTTCTGAACCGGTAGCGATGAAAAT  >  SRR4302543.33365/1‑94 (MQ=60)
                                                                                             |                                                                                             
TACCCGCTTCTACAGCAACGCGTGCAGTAACCGCTTTCGGCAGTACGGATTCACGGTAAGCAGCATCCTGCTTGTCAAATGCGTCGGTAGACGACATGGACACCACGCGCGCTTTCACGCCTTCGGCAGTCAGTTTTTCGTAGGCAGCAACAGCCAGTTCAACTTCTGAACCGGTAGCGATGAAAAT  >  NC_000913/3077812‑3077998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: